Suncus etruscus (white-toothed pygmy shrew): 126032426
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Entry
126032426 CDS
T09902
Symbol
PCDH7
Name
(RefSeq) protocadherin-7 isoform X1
KO
K16498
protocadherin delta 1
Organism
setr
Suncus etruscus (white-toothed pygmy shrew)
Pathway
setr03273
Virion - Lassa virus and SFTS virus
Brite
KEGG Orthology (KO) [BR:
setr00001
]
09120 Genetic Information Processing
09125 Information processing in viruses
03273 Virion - Lassa virus and SFTS virus
126032426 (PCDH7)
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
setr01009
]
126032426 (PCDH7)
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
setr04515
]
126032426 (PCDH7)
Protein phosphatases and associated proteins [BR:
setr01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
126032426 (PCDH7)
Cell adhesion molecules [BR:
setr04515
]
Cadherins
Protocadherins
126032426 (PCDH7)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cadherin
Protocadherin
Cadherin_2
Cadherin_CELSR2_9th
Mid2
TMEM154
KIAA1549
LYRIC
Cadherin_pro
MLANA
DNER_C
Adeno_E3_CR2
EphA2_TM
Motif
Other DBs
NCBI-GeneID:
126032426
NCBI-ProteinID:
XP_049646054
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All DBs
Position
16:25919704..26396859
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AA seq
1267 aa
AA seq
DB search
MLRMRTTGWARGWWRLSRCCCWWCCLLLMLLRISLSPVAAKQLLRYRLAEEGPADVRIGN
VASDLGIVTGSGEVTFSLESGSEYLKIDNLTGELSTSERRIDREKLPQCQMIFDENECFL
DFEVSVIGPSQSWVDLFEGRVIVLDINDNTPTFPSPVLTLTVEENRPVGTLYLLPTATDR
DFGRNGIERYELLQEPGGGGGGGGGENRRPGPADGTPYSGGVGNGPKRRPEGPEVGSSSG
PGLGGSSGGGGRSSVFELQVADTPDGEKQPQLIVKGALDREQRDSYELTLRVRDGGEPPR
SSQAILRVLITDVNDNSPRFEKSVYEADLAENSAPGTPILQLRAADLDVGVNGQIEYVFG
AATESVRRLLRLDEATGWLSVLHRIDREEVNQLRFSVMARDRGQPPKTDKATVVLNIKDE
NDNVPSIEIRKIGRIPLKDGVANVAEDVLVDTPIALVQVSDRDQGENGVVTCTVVGDVPF
QLKPASDTEGDQNKKKYFLHTSAPLDYETTREFNVVIVAVDSGSPSLSSNNSLVVKVGDT
NDNPPVFGQSVVEVYFPENNIPGERVATVLATDADSGKNAEIAYSLDSSVLGIFTINPDT
GDILVNTVLDREQTDRYEFKVNAKDKGVPVLQGSTRVIVQVADKNDNDPKFMQDVFTFYV
KENLQPNSPVGMVTVMDADKGRNAEMSLYIEENSHMFSIENDTGTIYSTISFDREHQTTY
TFRVKAVDGGDPPRSATATVSLFVMDENDNAPTVNLPRNGSYILLPPSSNVRTVVATVLA
TDSDDGINADLNYSIVGGNPFKLFEIDATSGVVSLVGKLTQKHYGLHRLVVQVNDSGQPS
QSTTTLVHVFVNESVSNATVIDSQIARSLHTPLTQDIAGDPSYEMSKQRLSIVIGVVAGI
MTVILIILIVVMARYCRSKNKNGYEAGKKDHEDFFTPQQHDKSKKPKKDKKNKKSKQPLY
SSIVTVEASKPNGQRYDSVNEKLSDSPSMGRYRSVNGGPGSPDLARHYKSSSPLPTVQLH
PQSPTAGKKHQAVQDLPPANTFVGAGDNISIGSDHCSEYSCQTNNKYSKQPFRRVTFSVV
SQPQDPHQGSLQSCYDSGLEESETPSSKSSSGPRLGALPLPEDNYERTTPDGSVGEAEHM
ENDSRPLPDVALTGKCTRECDEYGHSDSCWMPVRTSPERKKSQPKLSTFMPVDERGSQEK
LANGEAAVMGDRNRNLLNKKLTSSYETFSAASFSKNEEANPEDIPLTKTGEYKPSPVNTL
TRREVYL
NT seq
3804 nt
NT seq
+upstream
nt +downstream
nt
atgctgaggatgcggaccacggggtgggcgcgcggttggtggcgcctgagccgctgctgc
tgctggtggtgttgtctgctcctcatgctgctgcggatctcgctcagcccggtggccgct
aagcaactcctccggtaccgcctggccgaggaaggcccggccgacgtgcgcatcgggaac
gtggcctccgacctgggcatcgtgacgggctccggagaggtgactttcagcttggagtcg
ggctcggaatacctgaagatcgacaacctgacgggcgagctgagcaccagcgagcgacgc
atcgaccgcgagaagttgccccagtgtcagatgatcttcgacgagaacgagtgtttctta
gacttcgaggtgtccgtcatcgggccttcgcagagctgggtagacctcttcgaaggccgg
gtcatcgtgctggacatcaacgacaacacgcccaccttcccgtcgcccgtgctcaccctc
acggtggaggagaaccgacccgtgggcaccttgtatttgctgcccaccgccacggacagg
gacttcggccgcaacggcatcgagcgctacgagctgctgcaagaacccgggggcggcggc
ggcggcggcggaggcgagaaccggcgccccgggcctgcagacggcaccccttattctggg
ggcgttggcaacgggcccaaaaggcgcccagaggggcccgaagttggtagcagcagtggg
cccggcttggggggcagcagcggcggcggtggcaggagcagcgtgttcgagctgcaagtc
gccgacaccccagacggcgagaagcagccgcagctgatagtgaagggagcactggatcgc
gagcaacgcgactcctacgagttgaccctgcgggtgcgggatggaggcgagcccccgcgt
tcctcgcaggccatcttgcgggtgctcatcaccgacgtgaacgacaacagcccccgattc
gagaagagcgtgtacgaggccgacctggcggagaacagcgccccgggcacgcccatcctg
cagctgcgggccgcagacctggacgtcggggtgaacgggcagatcgagtacgtgttcggg
gcggccaccgagtcggtgcggaggttgctgcggctcgacgaggctacggggtggctcagc
gtgctgcaccgcatcgaccgcgaggaggtgaaccagctgcgtttcagcgtcatggcccgc
gaccgtggccagccccccaagaccgacaaggccaccgtggtgctcaacatcaaggacgag
aacgacaacgtgccctccatcgagatccgcaagatcggacgcatccctctcaaagacggg
gtggccaacgtggccgaggatgtgctggtggacacccccatcgccctggtgcaagtgtcc
gaccgagaccagggcgagaacggggtggtgacttgcaccgtggtgggcgatgtgcccttc
cagctcaagcccgccagcgacaccgagggcgaccagaacaagaagaagtatttcttgcac
acctcggcccctctggactatgagaccacccgggagttcaacgtggtcatcgtggccgtg
gactcgggcagccccagtctgtccagcaacaactccctggtggtcaaagtgggggacacc
aatgacaacccacccgtctttggccagtcggtggtggaagtgtatttccccgagaataac
atcccaggggagagagtggccacggtcctggccacagatgcagacagcggaaagaacgct
gagatcgcctattccctggattcttccgtgctggggatctttaccatcaaccccgacact
ggggacatcttggtcaacaccgtgctggaccgggagcagacggacaggtatgagtttaaa
gtgaatgccaaagacaaaggggtccccgtgttgcagggtagcacccgggtgatcgtgcag
gtggctgacaagaatgacaatgaccctaagtttatgcaggatgtctttaccttttatgtg
aaagaaaacttgcagcccaacagccccgtggggatggtcaccgtgatggatgctgacaag
gggcgcaacgcggagatgagcttgtacatcgaggagaacagccacatgttttccatcgag
aatgacacggggaccatttattccaccatctcctttgaccgggaacatcagaccacctac
acattccgagtcaaagctgtggatggaggggatccccctagatcagccactgccactgtt
tctctcttcgtgatggatgagaatgacaatgcccccaccgtcaacttgcccagaaacggt
tcctatattttactgcccccttccagtaatgtcaggacagttgtagccacagtgctggca
acagacagtgatgatggcatcaatgcagacctgaactatagcattgtgggagggaatccc
ttcaagctctttgagattgatgccaccagtggtgtggtttccttagtggggaaactcacc
cagaaacattacggtttgcacaggttggtggtgcaagtcaatgacagtgggcagccttcc
caatccaccacaactctggtgcacgtgtttgtcaatgagagtgtgtccaatgcaactgtg
attgactctcagatagccagaagtttgcatactccgctcacccaggatatagctggtgac
cccagctatgaaatgagcaaacagagactcagcattgtcattggggtggtggctggaatt
atgacagttattctcatcatcttaattgtggtgatggcaaggtactgccggtccaagaac
aaaaatggctatgaagccggcaagaaagaccatgaagacttttttacaccacaacagcat
gacaaatctaaaaagcctaaaaaggataagaaaaacaaaaagtcaaagcagcctctctac
agcagcattgtcactgtagaggcttctaaacccaatggacagaggtatgacagtgtcaat
gagaagctctcagacagccccagcatggggcgataccggtcagtgaatggtgggcctggc
agtcctgatctggccaggcattacaaatccagttccccattgcctactgtccaacttcac
cctcagtcaccaacagcagggaaaaaacaccaggccgtccaagatctaccaccagccaac
acatttgtgggagcaggagacaacatatcaatcggatcagatcactgctccgaatacagc
tgtcaaaccaataacaagtacagcaaacagccatttcgtagagtgacgttttctgttgtg
agtcagccccaggaccctcatcaggggtcactgcagagttgctatgacagcgggctggag
gagtcagaaacaccaagcagtaagagttcatcagggccaagactgggtgcccttccactc
ccagaagacaactatgaaaggaccacgccggatggcagtgttggtgaggcagagcatatg
gaaaatgattcaagacctcttccagatgttgccctgaccgggaagtgcacgcgggaatgt
gatgaatacggccactcagactcgtgctggatgcctgtccgcacatccccggagaggaag
aagagccagcctaaactctccaccttcatgcctgttgatgaacgaggtagccaggaaaag
ctggccaacggcgaggctgccgtcatgggtgaccgcaacagaaacctcctaaacaaaaag
ttgacctcctcctatgagaccttcagtgcagctagtttcagcaagaatgaggaagctaat
cctgaggatattcccctgaccaaaacaggggaatacaagccatctcctgtcaatactctc
actagaagagaagtgtacctgtag
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