Suncus etruscus (white-toothed pygmy shrew): 126032430
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Entry
126032430 CDS
T09902
Symbol
RFC1
Name
(RefSeq) replication factor C subunit 1
KO
K10754
replication factor C subunit 1
Organism
setr
Suncus etruscus (white-toothed pygmy shrew)
Pathway
setr03030
DNA replication
setr03410
Base excision repair
setr03420
Nucleotide excision repair
setr03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
setr00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
126032430 (RFC1)
03410 Base excision repair
126032430 (RFC1)
03420 Nucleotide excision repair
126032430 (RFC1)
03430 Mismatch repair
126032430 (RFC1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
setr03032
]
126032430 (RFC1)
03400 DNA repair and recombination proteins [BR:
setr03400
]
126032430 (RFC1)
DNA replication proteins [BR:
setr03032
]
Eukaryotic type
DNA Replication Elongation Factors
RFC (replication factor C)
126032430 (RFC1)
DNA repair and recombination proteins [BR:
setr03400
]
Eukaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
RFC (replication factor C)
126032430 (RFC1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RFC1
BRCT
AAA
PTCB-BRCT
BRCT_2
Rad17
AAA_22
AAA_14
RuvB_N
nSTAND3
AAA_7
AAA_33
AAA_5
AAA_18
AAA_16
Zeta_toxin
AAA_17
AAA_30
RNA_helicase
NTPase_1
NPHP3_N
AAA_19
Motif
Other DBs
NCBI-GeneID:
126032430
NCBI-ProteinID:
XP_049646062
LinkDB
All DBs
Position
16:complement(33517555..33591651)
Genome browser
AA seq
1148 aa
AA seq
DB search
MDIRKFFGVIPSGKKLVSETVKKNEKIKAAEEITKAKRGKKEIKVNTCKEDDFKQKQPSK
KKRIIYDSDSESEETVQVKNAKKQAEKLPLSSKPGKILRREPVTYISETDEEDDFICKKA
VSKAKENGRSTVSYLGVANIKKGEENTKTKNKPLSPIKLTPTSVLDYFGTGSIQRSEKKM
VASKRKEVSHSADVSSLNDEAIAKQLQLDEDAELERQLHEDEEFARTLAMLDEEPKTKKV
RKDPEERETFSPSQDNLNKAEKHKYSHKVKAEQFSNEVNSSPKKQIKCESSKEPQQFSKS
LAHKVGEPSSPNISSKLTLLKTKEEHTYKEMSPLASKRKENAIELKGETRTPKKAKSSPS
KKESISPEDSEKRRTNYQAYRSYLNREGPKALGSKEIPTGAENCLEGLTFVITGVLESIE
RDEAKSLIERYGGKVTGNVSKKTNYLVMGRDSGQSKSDKAAALGTKIIDEDGLLNLIRTM
PGKKSKYEIAVEAEMKKEKSKLERTPQKNNQRKMKTSPNKKESETQRNRRTPQKGGILTP
KKRGPTLCQLDSHVTELLAKEPQGISRARTATEGCREDKAESLLWVDKYKPTSVKTIIGQ
QGDQSCANKLLRWLQNWHKAPSEERKHAAKFGKFAGKDDGSSFKAALLSGPPGVGKTTTA
SLVCQELGYSYVELNASDTRSKNSLKEIVAESLNNTSIKGFYSSGSSPASLKHALIMDEV
DGMAGNEDRGGIQELIGLIKHTKIPIICMCNDRNHPKIRSLVHYCFDLRFQRPRVEQIKG
AMLSIAFKEGLKIPPPAMNEIILGANQDIRQVLHNLSMWCAENKALTYDQAKADSHRAKK
DIKLGPFDVARKVFATGEETAHMSLMDKSDLFFHDYSIAPLFVQENYVHVKPIAAAGDMK
KHLMLLSRAADSICDGDLVDRQIRSQQNWNLLPTQAIYASVLPGELMRGYMTQFPNFPSW
LGKYSSTSKHDRIVQDLALHMNLRTFSSKRTVNLDYLSFLRDALVQPLISQGVEGVPEVV
SLMDMYYLMKEDFESIMELSSWGGNPSPFSKLDPKVKAAFTRAYNREAHRTPYSLQTVKT
PRHSSSMGPSLDLEYSEELTEEDSQADDKDPDSMENDAMIKKKSKSSKPSKSEKDKEPRK
GKGKSSKK
NT seq
3447 nt
NT seq
+upstream
nt +downstream
nt
atggatattcggaaattttttggggttataccaagtggaaagaagcttgtaagtgaaact
gtgaagaagaatgaaaaaatcaaggctgctgaagaaatcacaaaagccaagagaggaaaa
aaggaaatcaaggtaaatacttgtaaagaagatgactttaaacagaagcaaccaagtaag
aaaaagaggatcatctatgattcagattctgaatcagaggagactgtgcaggtcaaaaat
gccaaaaagcaagcagaaaaattgccattgtcttctaagcctggtaaaattctgcgacgg
gaaccagttacgtacatttcagagacagatgaagaagatgactttatatgtaaaaaagca
gtctcgaaagcaaaagagaatggaagatctacagttagttatcttggagtagctaatata
aaaaagggtgaagaaaacactaagaccaagaataaacctttgtcaccaataaaacttacc
cccacatccgtgctggactattttggaactggaagtattcaaagatcagaaaagaagatg
gtggcaagcaaacgaaaagaggtttcacacagtgcagatgtttccagtttaaatgatgaa
gccattgccaagcagttacaacttgatgaagatgcggagctggagcggcagctgcatgag
gatgaagagtttgccagaactttagccatgttggatgaagaacccaagaccaagaaggtt
cgaaaggacccagaagagagagaaacattttcaccttcccaagacaatttaaataaagca
gaaaaacataaatattctcacaaagtcaaagcagaacaattttcaaatgaagtgaactct
agtcccaagaagcaaattaaatgtgaaagttcaaaagaacctcaacaattttccaagtca
ttagctcacaaagtaggagaaccatcttctccaaatatcagttccaagttgacccttttg
aaaacaaaagaagagcatacttataaggaaatgtcgcccttggcctcaaaaagaaaagag
aatgccattgaattgaaaggagagaccagaactcctaagaaagccaaaagttctccatct
aaaaaagagtctataagtcccgaggattctgaaaagagacgcaccaattatcaagcttat
cgaagttacttaaatcgcgagggtcctaaagctcttggctccaaagaaatcccaacggga
gctgaaaattgcttggaagggcttacttttgtcatcactggagtgctggagtccatcgaa
cgggatgaggccaagtctctgattgagcggtatggagggaaagtaacaggcaatgtcagc
aagaaaaccaactacctggtcatgggccgagacagtggccagtccaagagtgacaaggca
gcagccttggggacaaaaattattgatgaagatggcctgttaaacctgattcggactatg
ccaggcaagaagtccaagtacgaaatagcagttgaagctgagatgaagaaagaaaagtct
aaattggagcggacaccccaaaaaaacaaccaaagaaaaatgaaaacaagtccaaacaag
aaggaatcagaaactcaaaggaacagacgaactccccagaaaggtggcatcctcacgcca
aagaaacgggggcctaccctgtgccagttggactcgcatgtcacggagctgctggccaag
gagccacagggcatcagtagggcaaggactgcgactgaaggctgcagggaagacaaagca
gagtctttgctttgggtggataagtacaagcccacctcagtcaagaccatcattggccag
cagggcgaccagagctgcgccaacaaacttctgcgctggttgcagaactggcacaaggct
ccctcagaagagaggaaacacgcagccaagttcggtaaatttgctggcaaagatgatggc
tccagttttaaggctgcgttgctttcaggccctccaggtgttggcaaaaccaccacagcc
tctctggtttgtcaggaattgggatatagctacgtggaactgaatgcgagtgacactcgt
agtaagaacagtttgaaggagattgtggccgaatcactgaataataccagcatcaaaggc
ttttattcaagtgggtcctctcctgcaagcctgaaacacgcgctcattatggatgaagtg
gatggaatggcaggcaatgaggacaggggtggaatccaggaattaattggcctgataaaa
cacaccaaaattcccattatttgtatgtgcaatgatagaaatcatcccaagattcgctct
ttggtgcattattgctttgatcttcgttttcaaagacctcgggttgaacagattaagggc
gctatgctatctattgcatttaaagaaggtctaaagattcctcctccagctatgaatgaa
ataattttaggagccaatcaagatatcagacaggttttacacaatctcagtatgtggtgt
gcagaaaataaggcactaacctatgaccaggccaaggctgattctcacagagccaaaaag
gatatcaaactgggtccttttgatgttgcccggaaggtgtttgcgactggagaagagact
gctcacatgtcattgatggacaaatcggatctcttcttccatgattattccatcgcgccc
ctctttgtgcaggagaactacgtccatgtgaagcccatagctgcagcgggtgacatgaag
aagcacttgatgctgctgagcagagcagctgacagcatctgtgacggggacctggtggac
cgccagatccggagtcagcagaactggaatttgctgcccacccaggccatttatgccagt
gtccttcctggagaactaatgaggggctacatgacccagtttcccaacttcccgagctgg
ctgggcaagtactcgtccacaagcaaacatgatcgcattgttcaagacctggctttgcac
atgaacctcagaactttctccagcaaaaggactgtaaacctggattatctgtcattcctg
cgggatgcacttgtacagcccttgatttcacaaggggttgaaggagttccagaggttgtc
tccctcatggacatgtactacttgatgaaggaagactttgagagtataatggaattgagc
agctggggaggcaatcccagcccattctccaagctggatcctaaggtgaaagcagccttc
accagagcctacaacagggaagcccaccgcaccccttactcgcttcagaccgtgaagact
cccagacatagcagcagcatgggaccatcactggacttggagtacagcgaggagttgacc
gaggaggactcgcaggctgatgacaaggaccctgattccatggagaatgatgctatgatc
aagaaaaagtcaaaatcttcaaagccttcaaaatcagaaaaagataaggagcccagaaaa
ggaaaaggaaaaagttccaagaagtga
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integrated database retrieval system
