Suncus etruscus (white-toothed pygmy shrew): 126032450
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Entry
126032450 CDS
T09902
Symbol
FIP1L1
Name
(RefSeq) pre-mRNA 3'-end-processing factor FIP1 isoform X1
KO
K14405
pre-mRNA 3'-end-processing factor FIP1
Organism
setr
Suncus etruscus (white-toothed pygmy shrew)
Pathway
setr03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
setr00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
126032450 (FIP1L1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
setr03019
]
126032450 (FIP1L1)
Messenger RNA biogenesis [BR:
setr03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Cleavage and polyadenylation specificity factor (CPSF) complex
126032450 (FIP1L1)
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Paralog
Gene cluster
GFIT
Motif
Pfam:
Fip1
Motif
Other DBs
NCBI-GeneID:
126032450
NCBI-ProteinID:
XP_049646089
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Position
16:43882801..43960723
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AA seq
603 aa
AA seq
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MSAGEVERLVSDLSGGTGGDEEEEWLYGGPWDVHVHSDLAKDLDENEVERPEEESASANP
PSGVEEEAAENGVPKPKVTETEDDSDSDSDDDEDDVHVTIGDIKTGAPQYGSYGTAPVNL
NIKTGGRVYGTTGTKVKGVDLDAPGNINGVPLLEVDLDSFEDKPWRKPGADLSDYFNYGF
NEDTWKAYCEKQKRIRMGLEVIPVTSTTNKITAEDCTMEVTPGAEIQDGRFNLFKVQQGR
TGNSEKEAALPSTKTEFTSPPSLFKTGLPPSRNSSSSQSQTSTASRKASSSVGKWQDRYG
RAESPDLRRLSGAIDVIGQTITISRVEGRRRANENSNIQVLAERSATEVDNNFSKPPPFF
PPGAPPTHLPPPPFLPPPPTVSTAPPLIPPPGIPITVPPPGFPPPPGAPPPSLIPTIESG
HSSGYDSRSARAFPYGNVAFPHLPGSAPSWPSLVDTSKQWDYYARREKDRDRDRDRDRER
DRDRDRERERTRERERERDHSPTPSVFNSDEERYRYREYAERGYERHRASREKEERHRER
RHREKEETRHKSSRSNSRRRHESEEGDSHRRHKHKKSKRSKEGKEAGSEPAPEQENTEAA
PAE
NT seq
1812 nt
NT seq
+upstream
nt +downstream
nt
atgtcggccggcgaggtcgagcgcctcgtgtcggacctgagcggcgggaccggaggggat
gaggaggaagagtggctctatggcggcccatgggacgtgcatgtgcacagtgatttggca
aaggacctagatgaaaatgaagttgaaaggccagaagaagaaagtgccagtgctaaccct
ccatctggagttgaagaggaagctgctgaaaatggtgtacctaaaccgaaagtgactgaa
acggaagatgatagtgatagtgacagtgatgatgatgaggatgatgtccatgtcactata
ggagacattaaaactggagccccacagtatgggagttacggaacagcaccagttaatctt
aatatcaagacaggaggaagagtttatggaactacaggaacaaaagtcaaaggggtagat
cttgatgcacctggaaacattaatggagttccactcttggaagtagatttggattctttt
gaagataaaccatggcgtaaacctggtgctgatctttctgattattttaattatgggttt
aacgaagatacctggaaagcttactgtgaaaaacaaaagaggatacgaatggggcttgaa
gttataccagttacctcaactacaaataaaattacggccgaagactgtactatggaagtt
acaccaggtgcagagatccaagatggcagattcaatctttttaaggtacagcagggaaga
actggaaattcagagaaggaagcagcacttccatctacaaaaactgagtttacttctcct
ccttctttgttcaagactgggcttccacctagcagaaacagcagctcttctcagtctcag
acaagtactgcctccagaaaagccagttcaagcgttgggaagtggcaggaccgatatggg
agggccgaatcgcctgatctaaggagattatctggcgcaattgatgttattggtcagact
ataactatcagcagagtagaaggaaggcgacgggcaaatgaaaacagcaacatacaggtc
ctagctgaaagatcagccactgaagttgacaacaattttagcaaaccacctccatttttc
ccaccaggagctcctcccacccatctgccaccgcctccatttctcccaccacctccaact
gttagcactgctccacctctgattcctccaccaggtattccaataactgtaccacctcca
ggttttcctcctcctccaggcgcaccacctccatctcttataccaacaatagaaagtgga
cattcctccggttatgatagtcgttctgcacgtgcttttccatatggcaatgttgcattc
cctcaccttcctggttctgctccttcctggcctagtcttgtggacaccagcaagcagtgg
gactattatgccagaagagagaaggaccgagatcgagacagagaccgagaccgtgaacga
gatagggaccgagatcgagaacgagaacgcactcgtgagagggagcgggagcgggatcac
agtccaacacccagtgttttcaacagtgatgaagaacgctatagatatagagaatatgca
gaaagaggctatgagcgtcacagagcaagtcgagagaaagaagaacgacatagggaaaga
cgacacagagagaaagaggaaacaagacacaagtcatctcgaagtaatagtcgacgtcgt
catgaaagtgaagaaggagacagtcataggagacacaaacacaaaaaatcgaaaagaagc
aaagaaggaaaagaagctggcagtgagcctgcccctgagcaggagaacactgaagccgca
ccagccgagtaa
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