Suncus etruscus (white-toothed pygmy shrew): 126033521
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Entry
126033521 CDS
T09902
Symbol
DDX21
Name
(RefSeq) nucleolar RNA helicase 2
KO
K16911
ATP-dependent RNA helicase DDX21 [EC:
5.6.2.7
]
Organism
setr
Suncus etruscus (white-toothed pygmy shrew)
Brite
KEGG Orthology (KO) [BR:
setr00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
setr03009
]
126033521 (DDX21)
03036 Chromosome and associated proteins [BR:
setr03036
]
126033521 (DDX21)
Enzymes [BR:
setr01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
126033521 (DDX21)
Ribosome biogenesis [BR:
setr03009
]
Eukaryotic type
Pre-60S particles
Helicases
126033521 (DDX21)
Chromosome and associated proteins [BR:
setr03036
]
Eukaryotic type
Chromatin remodeling factors
B-WICH complex
126033521 (DDX21)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
GUCT
ResIII
CMS1
AAA_30
Cas3-like_C_2
ERCC3_RAD25_C
Motif
Other DBs
NCBI-GeneID:
126033521
NCBI-ProteinID:
XP_049646443
LinkDB
All DBs
Position
17:complement(1289390..1313165)
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AA seq
776 aa
AA seq
DB search
MPGKLAASGSDAAMGKAEKPRRQADKKGKKEKPKDTEIEDAVEKEEIVSPKAKKVKKKAE
PSEVETEPPKSKKAPKKEEISPDDGSPKRKSGKKKKESQESVDSPKTKKVKSEEPEEEEE
EEEEEEEAVAPKPKKMKKEKGMNGEIGGKSPKIKNGFAHPGSDSNSSVAASEESNTELEQ
EMSVEQKEGAFSNFPISEETIKLLKARGVTFLFPIQAKTFHHVYSGKDLIAQARTGTGKT
FSFAIPLIEKLLGDLQDRKRGRGPQVLVLAPTRELANQVSKDFSDITKKLAVACFYGGTP
YGGQIDRMRNGIDILVGTPGRIKDHLQNGKLDLTKLKHVVLDEVDQMLDMGFADQVEEIL
SVAYKKDSENNPQTLLFSATCPHWVFNVAKKYMKSTYEQVDLIGKKTQKAAITVEHLAIK
CHWTERAAVIGDVIRVYSGYNGRTILFTETKKEAQELSQNSSIKQDAQSLHGDIPQKQRE
ITLKGFRNGNFGILVATNVAARGLDIPEVDLVVQCSPPKDVESYIHRSGRTGRAGRTGVC
ICFYQHKEEYQLAQVEQKAGIKFKRIGIPSATEIIKASSKDAIRLLDSVPPTAISHFKQS
AEKLIEEKGAVEALAAALAHISGATSVDQRSLINSQAGFVTMVMKCSIEMPNISYAWKEL
KEQLGEDIDSKVKGMVFLKGKQGVCFDIPTATATQVQEKWHDSRRWQLAVATEQPELEGP
KEGYRNFRGQRDGGRGFRGQRDRSRGGFRGQRGGGGGNSGRFQNKGQKRSFNKAFG
NT seq
2331 nt
NT seq
+upstream
nt +downstream
nt
atgccgggcaaactcgcggcgtcgggctcggacgcggccatgggcaaggcggagaagccg
cgcaggcaggccgacaagaaaggtaaaaaagaaaagccaaaagacactgagatcgaggat
gcagtagaaaaggaggaaatcgtttctcccaaagctaagaaagttaaaaagaaagcagaa
ccttctgaggttgaaacagagccccctaaatccaaaaaggcaccgaagaaagaggagatt
tctcccgatgatgggtctcctaaaagaaaaagtggaaaaaagaagaaagaatcccaggaa
agcgttgattctcctaaaaccaaaaaggttaagagtgaagagcccgaagaggaagaagaa
gaagaagaagaagaagaagaagcagttgcacctaagcccaaaaagatgaagaaagaaaaa
ggaatgaatggagaaattggggggaaaagtcccaaaatcaagaacggctttgctcatcct
ggttctgattctaactccagcgtagctgccagtgaagaaagtaacactgagttagagcag
gaaatgtctgtggaacaaaaagaaggtgctttctctaattttcccatatctgaagagact
attaaattgctcaaagctcgtggggtgacattcctgtttcctatacaagcgaagacattt
caccatgtctatagtgggaaggacttaatcgcacaggcgcgaacagggactggcaagacc
ttctcctttgccatccctctgattgagaaacttctgggagaccttcaggaccggaagaga
ggccgtggccctcaggtactggttcttgcacccacgagggaattggcaaaccaagtgagc
aaagatttcagtgatatcaccaaaaagctggcagtggcttgtttctatggtggaactcct
tatggaggtcaaattgaccgcatgcgcaatggaatcgacatcctggttgggaccccaggc
cgcatcaaagaccatctgcagaacggcaagttggatctcaccaaactgaagcacgttgtc
ctggacgaggtggaccagatgttggacatgggcttcgctgaccaggtggaggagatttta
agtgtggcctataagaaagattcagaaaacaatccccaaacattgcttttttctgctact
tgccctcactgggtgtttaatgttgctaagaaatacatgaagtctacatacgaacaggtg
gacctgattggtaaaaagactcagaaagcggctataaccgtggagcatctggctatcaag
tgccactggaccgaaagggcagcagttattggggatgtgatccgagtgtatagtgggtac
aacggacgcaccatcctcttcaccgaaaccaagaaggaggcccaggagttgtcccagaac
tcgtccattaagcaggacgcccagtcattacacggagacattccacagaagcaaagagaa
attaccctgaaaggttttaggaatggcaattttggcattttggtcgcaaccaatgttgct
gcacgtgggttagacatccctgaggtcgacctggtcgttcagtgttctccgccaaaagac
gtggagtcctacatccaccgttccgggcgaacaggcagagcgggaagaactggggtctgc
atctgcttctatcagcacaaggaggagtatcagttggcgcaagtagaacagaaagcggga
attaagtttaagcggattggcattccttcagcgacagagatcatcaaagcttccagcaaa
gatgccatcaggcttttggattcagttcctcccacggccattagccacttcaaacagtca
gccgagaagcttatagaggagaagggagctgtggaagccctggcagcagccctggcccac
atatccggagccacgtctgtggaccagcgctccttgatcaactcacaagcgggctttgtg
actatggtcatgaagtgctctattgagatgcccaacatcagctacgcctggaaggagctg
aaggagcagctgggcgaggacatcgactccaaagtgaaggggatggtctttctcaaagga
aagcagggtgtttgtttcgacatcccgactgcgacagcaacacaagtgcaggagaaatgg
cacgattctcggcgctggcagctggcggtggccacggagcagccggagctggaaggcccc
aaggaggggtaccggaacttccggggacagagggacgggggccgaggcttccgggggcag
cgggacagaagccgtgggggcttccggggacagcgcggaggaggcggcggcaacagtggc
agattccagaacaaagggcagaagcggagtttcaacaaggcctttggctag
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