Suncus etruscus (white-toothed pygmy shrew): 126033681
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Entry
126033681 CDS
T09902
Symbol
PPIL2
Name
(RefSeq) RING-type E3 ubiquitin-protein ligase PPIL2
KO
K10598
peptidyl-prolyl cis-trans isomerase-like 2 [EC:
5.2.1.8
]
Organism
setr
Suncus etruscus (white-toothed pygmy shrew)
Pathway
setr04120
Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:
setr00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
126033681 (PPIL2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
setr03041
]
126033681 (PPIL2)
03110 Chaperones and folding catalysts [BR:
setr03110
]
126033681 (PPIL2)
04121 Ubiquitin system [BR:
setr04121
]
126033681 (PPIL2)
Enzymes [BR:
setr01000
]
5. Isomerases
5.2 cis-trans-Isomerases
5.2.1 cis-trans Isomerases (only sub-subclass identified to date)
5.2.1.8 peptidylprolyl isomerase
126033681 (PPIL2)
Spliceosome [BR:
setr03041
]
Complex B
U4/U6.U5 tri-snRNP components
U4/U6.U5 tri-snRNP related factors
126033681 (PPIL2)
Complex C
U4/U6.U5 tri-SnRNP related factors
126033681 (PPIL2)
Other splicing related proteins
Minor spliceosome components
Minor spliceosome associated proteins
126033681 (PPIL2)
Chaperones and folding catalysts [BR:
setr03110
]
Protein folding catalysts
Peptidyl prolyl isomerase
Cyclophilin
126033681 (PPIL2)
Ubiquitin system [BR:
setr04121
]
Ubiquitin ligases (E3)
U-box type E3
126033681 (PPIL2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Pro_isomerase
Rtf2
zf-NOSIP
U-box
SUB1_ProdP9
Motif
Other DBs
NCBI-GeneID:
126033681
NCBI-ProteinID:
XP_049646643
LinkDB
All DBs
Position
17:22510777..22533377
Genome browser
AA seq
522 aa
AA seq
DB search
MGKRQHQKDKMYITCAEYTHFYGGKKPDLPQTNFRRLPFDHCSLSLQPFAYPVCTPEGVV
FDLLNIVPWLKKFGTNPSNGEKLDGRSLIKLNFAKNNEGKYHCPVLFTVFTNNTHIVAVK
TTGNVYAYEAVEQLNIKAKNFRDLLTDEPFTRQDIITLQDPTNLDKFNVSNFFHVKNNLK
VIDPDEEKARQDPSYYLKNTNAETRETLQELYREFKGDEVLAATMAVPEKKKVDKLNAAH
YSTGKVSASFTSTAMVPETTHEAAAIDEDVLRYQFVKKKGYVRLHTNRGDLNLELHCDMT
PKTCENFIRLCKKQYYDGTIFHRSIRNFVIQGGDPTGTGTGGESYWGKPFRDEFRPNLSH
TGRGILSMANSGPNTNKSQFFITFRSCAYLDKKHTIFGRVVGGFDTLTAMENVESDPKTD
RPKEEIRIDATTVFVDPYEEADAQIAEERKKTEVKEEAPESTAKPSKSSASSQGPQTYRQ
GVGKYINMAATKRVAEEEPSTSAAATAAKKKPSRGFGDFSSW
NT seq
1569 nt
NT seq
+upstream
nt +downstream
nt
atggggaagcgacagcaccagaaggacaagatgtacattacctgtgcagagtatactcac
ttttatggaggcaagaaaccagatctcccacaaacaaatttccgtcgcttaccatttgat
cactgcagtctttctctgcagccctttgcctaccctgtctgcactcctgagggcgtcgtc
tttgacttgctgaacattgtcccttggcttaagaagttcggcaccaatcccagcaatggc
gagaaactggatgggaggtccctgatcaagttgaacttcgcaaagaataatgaaggtaaa
taccactgcccagtgctgttcaccgtgtttaccaacaacacgcacatcgtggccgtgaag
accactggcaacgtctatgcctacgaggccgtggagcagctgaatatcaaggccaagaac
ttccgagacctgctcacggatgagcccttcacccgccaggacatcatcaccctgcaggac
cccaccaacttggacaagttcaatgtctccaacttctttcatgttaagaataacttgaaa
gtcatagacccggacgaagaaaaggccagacaggacccatcctactacctgaagaacacg
aatgccgagacccgcgagacgctgcaggagctctacagagagttcaagggcgacgaggtg
ctggcagccaccatggcggtgcccgagaagaagaaggtggacaagttgaacgctgcccac
tattccaccggcaaggtcagcgcttccttcacctccacggccatggttccagagaccacc
catgaagcagctgccattgatgaggacgttctgcgctaccagtttgtgaagaagaagggc
tacgtgcggttgcacaccaaccggggagacctcaacctagagctgcactgcgacatgaca
ccaaagacctgtgaaaacttcatcagactctgcaaaaagcagtattatgatggcactatc
ttccacagatccatccggaacttcgtgatccagggaggcgaccccactggcacaggcaca
ggcggggaatcctactggggaaagcctttccgagatgagttccggcccaacctctctcac
acgggccgggggatcctgagcatggcgaactcagggcccaacaccaacaaatcccagttc
ttcatcaccttccgctcctgcgcttacctggacaaaaagcacaccatctttgggcgggtt
gttgggggctttgacacactgacagctatggagaacgtggagagcgaccccaaaactgac
cgccctaaggaggagatccgcattgatgccaccaccgtgttcgtggacccctatgaagag
gcagatgcgcagatcgcagaagagcggaagaaaacagaggtcaaggaggaggcgccagaa
agtacagcaaagcccagcaaatccagcgcgagcagccagggcccccagacctaccgccag
ggagtgggcaagtacatcaacatggcggccacgaagcgtgtagctgaggaagaaccatcc
accagcgcggccgccactgcagccaagaagaaacccagccggggttttggggactttagc
tcctggtag
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