Suncus etruscus (white-toothed pygmy shrew): 126033784
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Entry
126033784 CDS
T09902
Symbol
GBF1
Name
(RefSeq) Golgi-specific brefeldin A-resistance guanine nucleotide exchange factor 1 isoform X1
KO
K18443
golgi-specific brefeldin A-resistance guanine nucleotide exchange factor 1
Organism
setr
Suncus etruscus (white-toothed pygmy shrew)
Pathway
setr04144
Endocytosis
Brite
KEGG Orthology (KO) [BR:
setr00001
]
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
126033784 (GBF1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
setr04131
]
126033784 (GBF1)
Membrane trafficking [BR:
setr04131
]
Endosome - Golgi transport
Arf GTPases and associated proteins
Arf GTPase associated proteins
126033784 (GBF1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sec7
TPR_28
Sec7-like_HUS
DUF758
DUF1045
Motif
Other DBs
NCBI-GeneID:
126033784
NCBI-ProteinID:
XP_049646744
LinkDB
All DBs
Position
17:46063816..46230016
Genome browser
AA seq
1861 aa
AA seq
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MVDKNIYIIQGEINIVVGAIKRNARWSTHTPLDEERDPLLHSFSHLKDVLNNITGLSEIE
PNVFLRPFLEVIRSEDTTGPITGLALTSINKFLSYALIDPTHEGTAEGMENMADAVTHAR
FVGTDPASDEVVLMKILQVLRTLLLTPVGAHLTNESVCEIMQSCFRICFEMRLSELLRKS
AEHTLVDMVQLLFTRLPQFKEEPKNYAGTNMKKLKMRAGGMSDSSKWKKQKRSPRPPRHI
TKVTPGSEQLTPNGNTLSFFLAGSMPFIDVPTSISSASSEAASAVVSPCTDSGLEFSSQT
TSKEDLTDLEQPGSPGYSSAAEPCSSELGAPEQSHLQERTQVEQTQSASVESIPEVLEEC
SSPADHSDSASVHDMDYINPRGVRFTQSSQKEGTALVPYGLPCIRELFRFLISLTNPHDR
HNSEVMIHMGLHLLTVALESAPIAHCQTLLGLVKDEMCRHLFQLLNVERLNLYAASLRVC
FLLFESMREHLKFQLEMYIKKLMEIITVENPKMPYEMKEMALEAIVQLWHIPSFVTELYI
NFDCDYYCSNLFEDLTKLLSKNAFPVSGQLYTTHLLSLDALLTVIDSTEGHCQAKVLSNL
NQQEKKETTRPSHETLEGSREASTSERKASDGKAVNMAPDTSGQHLPGGGWLPTDHGKPG
SSNLEETGDSGADQKFIQKPLRFSCLLPDPQELIEIKNKKKLLITGTEQFNQKPRKGIQF
LQEKGLLTIPMDNAEVAQWLRENPRLDKKMIGEFVSDRKNIDLLDSFVSTFSFQGLRLDE
ALRLYLEAFRLPGEAPVIHRLLEAFTEHWRNCNGSPFANSDACFALAYAVIMLNTDQHNH
NVRKQNTPMTLEEFCKNLKGVNGDKDFEQDILEDMYHAIKNEEIVMPEEQTGLVRENYVW
NVLLHRGATPEGIFLRVPPGSYDLDLFTMTWGPTIAALSYVFDKSLEETIIQKAISGFRK
CAMISAHYGLSDVFDNLIISLCKFTALSSESIENLPSVFGSNPKAHIAAKTVFHLAHRHG
DILREGWKNIMEAMLQLFRAQLLPKAMVEVEDFVDPNGKIFLQREETPSNRGESTVLSFV
NWLTLSGTEQSSVRGPSTETQEAKKVALECIKQCDPEKMITESKFLQLESLQELMKALVS
VTPDEETYDEEDAAFCLEMLLRIVLENRDRVGCVWQTVRDHLYHLCVQAQEFCFLVERAV
VGLLRLAIRLLRREEISGQVLLSLRILLLMKPSVLSRASHQVAYGLHELLKTNAANIHSG
DDWATLFTLLECIGSGVKPPAALQATARTDVPDAGAQSDSELPSHHQNDRILDRGYTSDS
EVYTDHGRPGKIHRSATDADVVNSGWLVVGKDDIDNSKPGPGPSRPSTSPLVNQYSLTVG
LDLGPHDTKSLLKCVESLSFIVRDAAHITPDNFELCVKTLRIFVEASLNGGCKSQEKRGK
SHKYDSKGNRFKKKSKEGSMLWRPRTSSQHATRGGHSDDDEDEGVPASYHTVSLQVSQDL
LDLMHTLHTRAASIYSSWAAEQRHLETGGRKIEADSRTLWAHCWCPLLQGIACLCCDARR
QVRMQALTYLQRALLVHDLQKLEALEWESCFNKVLFPLLTKLLENISPADVGGMEETRMR
ASTLLSKVFLQHLSPLLSLSTFAALWLTILDFMDKYMHAGSSDLLSEAIPESLKNMLLVM
DTAAIFHSADAREGSPSALWEITWERIDCFLPHLRDELFKQTVIQDPTPAEPHAQKPLPS
AHLTPAAGDTRTPSHPPPPEIPSELGASDMEKPESPQPVNSSSPGSPVASSPSRLSPGPE
GVPPLAQPPLILQPLASPLQVGVPPMTLPIILNPALIEATSPVPLLPTSRPTDPMPTSEV
N
NT seq
5586 nt
NT seq
+upstream
nt +downstream
nt
atggtggataagaatatttatatcattcaaggagagattaacattgtggttggggccatc
aaacgaaatgcacgatggagcacccatacaccactggatgaagagcgggatcctctgctg
catagttttagtcatctaaaggatgttttaaacaatataacgggactttcagaaattgag
cccaatgtgttccttcgtccctttctggaagtgattcgctctgaagataccactggccct
atcactggactggcactcacctctatcaataagttcttgtcctatgcactcatagatccc
actcatgaaggcacagcagagggaatggagaatatggcagatgctgtcactcatgcccgt
tttgtaggcacagatcctgccagtgatgaggttgtcctgatgaaaatacttcaggtgctc
cggactctgttgctcacccctgtgggtgctcatctgaccaatgaatctgtgtgtgaaatc
atgcagtcttgctttcggatctgctttgaaatgaggctcagtgagttattgagaaaatcc
gcagagcacactctcgtagacatggtgcagctgctcttcacaaggttacctcaatttaaa
gaagagcctaagaactatgcagggaccaacatgaagaagctgaaaatgagagcaggaggc
atgagtgattcatccaagtggaagaaacagaagcgatctccccggcccccacgccatata
accaaagtcacaccaggttcagagcagctcacccccaatgggaacaccttatcctttttc
ttggcaggtagcatgcccttcattgatgtgcccacatctatctcttctgcaagttctgaa
gctgcctcagcagtggtcagcccctgcacagacagtggtctagagttctcctctcagacc
acctccaaggaagaccttactgatctggagcaacctggctctccaggatacagttcagct
gcagagccttgcagcagtgaattaggggctcctgaacagtctcacctgcaggaaaggaca
caagtggaacaaacccagtcagcatccgtggaatccattcctgaggtgttagaggagtgc
tcgtccccagcagaccactcagactctgcctctgtccatgacatggattacatcaatccc
cgaggagttcgcttcacacagtcctcccagaaggaaggtactgctttggtcccctatggt
cttccctgtattcgagagctcttccgtttcctcatctccctcaccaatccacatgatcgt
cacaactcagaggttatgattcacatgggactgcatttgctaacagtggctcttgaatca
gcccctatagctcattgccaaaccctcttgggccttgtcaaggatgaaatgtgccgccat
ttattccagcttctcaatgtagagcgattgaacctttatgctgcttccctgcgtgtgtgc
ttcctactgtttgagagcatgagggaacatctcaaattccagttggagatgtacatcaaa
aagctcatggagatcatcactgtggaaaaccccaagatgccttacgagatgaaggagatg
gcgctggaggccattgtgcagctctggcatattcccagttttgtcactgagctttacata
aattttgattgtgattactactgttctaacctctttgaagatcttaccaaactactctcc
aagaatgccttccctgtttctggtcagctctatacaacacacctactatccctcgatgct
ctgttgacagtgattgacagtactgaaggccattgccaggccaaagtcctcagtaacctt
aaccagcaggagaagaaagagacaaccagacccagccatgaaacattggaaggctcccga
gaagctagcacttctgagagaaaagccagtgatgggaaagctgtaaacatggcccctgac
acttcaggccaacatctgccgggtggtgggtggctgccaacagatcatggaaaaccagga
agtagtaatctggaagagactggtgattctggagctgaccaaaagtttatccagaagcca
cttcgattttcctgcctcctaccagatccacaggaactgattgaaattaaaaacaaaaaa
aagctgctgatcactggcacagagcagttcaatcagaaaccaaggaaaggaattcagttt
cttcaggagaaaggcctccttaccatcccaatggacaatgcagaagtagcccaatggctc
cgagagaaccctcgactggacaagaaaatgataggagagtttgtgagtgatcgtaaaaac
attgacctgttggacagttttgtgagcaccttcagttttcagggtctacgattagatgaa
gctctccgcctctatctagaagccttccgcttacctggggaagcaccagtcattcaccgg
ttgctggaagcattcacagagcattggaggaattgtaatggctccccatttgccaatagc
gatgcctgctttgccctggcctacgctgtcatcatgcttaatactgaccagcataaccac
aacgttcgtaaacagaatacacccatgaccctggaggagttttgcaaaaacctgaaaggt
gtgaatggagacaaagactttgaacaagacatcctggaggacatgtaccacgccatcaag
aatgaggaaattgtgatgcctgaggagcagacaggcttggtacgggagaattatgtgtgg
aacgtgttgcttcatcgaggtgccactccagagggcattttcctacgtgtgcctcctggc
agctatgatcttgacctcttcaccatgacctggggccctactattgctgctctctcttat
gtctttgacaaaagtcttgaagagacaatcatccagaaagccatctcaggcttcaggaaa
tgtgccatgatctctgcccactatggcctcagtgatgtgtttgacaatctcatcatctcc
ttgtgcaaattcacagctctcagcagtgagtctattgagaaccttcccagtgtgtttgga
agcaacccgaaagcccacattgcagccaagactgtatttcatttggcccatcgtcacggt
gacatcttgcgcgagggctggaagaatatcatggaggccatgctgcaactattccgagct
cagctgctgcccaaggcgatggtggaggttgaagattttgtggatcccaatggtaagatc
tttctacagcgagaggagacaccatctaaccgaggagaatcaacagtactgagttttgtg
aactggctaacactcagtggtacggagcagtccagtgtgcggggtccatctactgaaacc
caggaggccaagaaagtagccttggagtgtattaagcaatgtgacccagaaaagatgatc
acagaaagcaagttcctccagttggagtcactgcaggagctcatgaaggctttggtctca
gtaacaccagatgaggaaacatatgatgaggaagatgctgctttctgtctggagatgctg
ctgaggattgtgctagagaacagggatcgtgtaggctgtgtgtggcagacagttcgagat
catctctaccacttgtgtgtccaggcacaggagttctgcttcctcgtggagcgggcagtg
gtggggctgctgcgcctggccattcgactgctccggagagaagagatcagtggccaggta
ctactctccctgcgtattttgctgctaatgaaacccagtgtgctgtcccgagccagtcac
caggtagcctatgggcttcatgagctcctcaagaccaatgcagccaacatccattcaggt
gatgactgggccacactctttacattgctggagtgtatcggctcaggcgtgaaacccccc
gcagccctgcaggccacagccagaactgatgtgcctgatgctggggcccagtcagacagt
gagctcccttcccaccatcaaaacgacaggatcctggatcgagggtacacttctgactcg
gaggtctacactgaccatggcaggcctggcaagatccaccgatcagccacagacgctgat
gtggtcaacagcgggtggttagtggtagggaaagatgacattgataactctaagccaggg
cctgggcccagtcggccaagcacttcacccctggtcaatcaatacagcctaacagtgggg
ctggaccttgggccacatgacactaaatccctgcttaagtgtgtggaatcgctgtccttc
atcgtgcgtgatgctgcccacatcacacctgacaactttgagctctgtgtcaaaactctt
cgcatctttgtggaggccagtctgaatggtgggtgcaagtcccaggagaaacgtgggaag
agtcacaaatacgacagcaaagggaatcgcttcaagaagaaatccaaggagggctctatg
ctttggcgacctcgaacctccagccagcatgccacccggggtgggcatagtgatgatgat
gaggatgaaggcgtgcctgccagctaccacacggtgtctttacaggtcagtcaggacctg
ctggatctgatgcacaccctgcacactcgggcagcctcgatctacagctcctgggcagcg
gagcagcgccacctggagacaggcggccggaagatagaagcagactcccgcaccctctgg
gcccactgctggtgccctttactgcagggcattgcctgcctgtgctgtgatgctcggcgc
caggtgcggatgcaggcgctgacctacctacagcgcgcgctcctggtacatgacttgcag
aagctcgaggccctggaatgggaatcctgcttcaacaaggttctgtttccgctactgacc
aaactcctggagaacattagccccgcagacgtaggtgggatggaagagacccggatgcgg
gcttccacactgctctcaaaggtcttcctacagcacctgtctccactgctgtcactctcc
acctttgctgctctctggctgaccatcctggacttcatggacaagtacatgcacgcaggc
tccagtgacttactgtcagaagcaatcccagagtctctaaagaacatgctcctcgtgatg
gacacggcagcgatcttccacagtgccgatgctcgagaaggaagcccctcagcactctgg
gagatcacctgggagcggattgactgcttcctgccccatctccgagatgagctcttcaag
cagactgtcatacaggaccccacacctgcggaacctcatgcccagaagcctctgccctca
gctcacctgactcctgctgctggtgacaccaggacacccagccacccacctccaccagag
ataccctctgagctaggggcttcagacatggagaagcctgagtccccccaacctgtcaac
agcagctcccccggatccccagtggcctcgagccccagtagactgagcccaggcccagag
ggggttcccccactggctcagcccccactaatcctgcagcccttggcctcccccctgcag
gtgggtgtcccacccatgactctgcccatcatcctcaatcctgctctcatcgaggccacc
tcaccagtacccctcctgcctacatcacgtcccacagaccccatgcccacctccgaggtg
aactaa
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