Suncus etruscus (white-toothed pygmy shrew): 126033791
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Entry
126033791 CDS
T09902
Symbol
RRP12
Name
(RefSeq) RRP12-like protein isoform X1
KO
K14794
ribosomal RNA-processing protein 12
Organism
setr
Suncus etruscus (white-toothed pygmy shrew)
Brite
KEGG Orthology (KO) [BR:
setr00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
setr03009
]
126033791 (RRP12)
Ribosome biogenesis [BR:
setr03009
]
Eukaryotic type
90S particles
Other 90S particles
126033791 (RRP12)
Pre-60S particles
Other pre-60S particles
126033791 (RRP12)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRP12_HEAT
HEAT_RRP12_N
HEAT_GCN1
Cwf_Cwc_15
Motif
Other DBs
NCBI-GeneID:
126033791
NCBI-ProteinID:
XP_049646754
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All DBs
Position
17:complement(41161696..41195889)
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AA seq
1302 aa
AA seq
DB search
MGRSGKLPSGVSAKLKRWKKGHSSDSNPATCRHRQAARSRFFSRPSGKSELTVDALKLHN
ELQSGSLHLGPKEGAEMAVDGGEEAVTLASSERTYGTFLSGLTDCTNLTFSKVQRFWESN
SAAHKEICAVLAAVTEVIRSEGGKETETEYFAALMTTLEAVESPESLAAVAYLLNLVLKR
VPSPVLMKKFSDTSKVFMDLLSTQAGGSSTSALRWILSCLATLLRKQDLEAWGYPVTMKV
YHGLLSFTVHAKPKIRKAAQHGVCSVLKGSDFMFGDKAPAHHPAAPSTAKFCIQEMEKSG
GSKEATGTLHMLTLLKDLLPCFPEGLVKSCCETLLKVMTLSHVLVTACAMQAFHGLFHAK
PGPGTLSAELSAQIITALYDYVPSENDLQPLLAWLKVMEKAHINLVRLQRNLGLGHLPRF
FGTAMSCLLSPHSQVVTAATQSLQELLKECVAPHMADIGSVTSTSTGPAQYVAKMFRFVE
EGLTYKFHATWSSVLSLLCAFFHACGRQAHPVMKKCLQSLCDLRLSPHFPHTTALDQAVG
AAVASMGPEVVLEAVPLEIDGSEETLDFPRSWLLPVIRDHVQETRLGFFTTYFLPLATTL
KSKAMDLAQAGSTVESKIYDTLQWQIWTLLPGFCTRPTDVAASFRGLARTLGMAISERPD
LRVTVCQALRTLITKGCEAEADQAEVSRFAKNFLPILFNLYGQPVAADDTPAPRRAVLET
IRTYLTITESQLVNSLLEKASVKVLDSASSDFTRLSVLDLVVALAPHADEAAISKLYSTI
RPYLESKAHGVQKKAYRVLEEVCASEQGPGALFVQNHLKDLKQTLLDSLQSTSSPAKRPR
LKCLIHIVRKLSAEHEDFIAALVPEVLLCTKEVSVGARKNAFTLLLEMGRAFLRFGPSCE
EALQRYLVLIYPGLVGTVTMVSCSILALTHLLFEFKGLMGSNTVEQLLQNVCLLLASRTR
DVVKSALGFIKVAAVAMDVTLLAKHVHLVMDSIGKLSDDMRRHFRMKLRNLFTKFIRKFG
FELVKGLLPAEYHKVLVNIRKAEARAKRHRALNQAAMEDESQEEEEEPAQGKGDSIEEIL
ADSEDEEEEEDDRSRGREQRKLARQRSQAWLKEGGGDEPLNFLDPKVAQRVLATQPGLGQ
GKKDHGFKVSADGRLIIREEEEEENPVKVEEEEDMKGEDEEMVELMANMGSIRSKKNSKR
PHQKEADDEELEVPPQYQAGGSGIHRPLTKKVAPGAEYKAKKAKGDMKKKGRLDPYAYIP
LNRTKLNRRKKMKLQGQFKGLVRATQRGSQVGHKLRRKERRP
NT seq
3909 nt
NT seq
+upstream
nt +downstream
nt
atggggcgctcgggcaagttgccgtccggggtctcggctaaactgaaacgctggaagaaa
ggccacagtagcgacagcaaccccgccacctgccgccaccgccaggccgcccgtagccgc
ttcttcagccggccttcagggaagagcgagctgaccgtggacgcgctgaagttgcacaat
gagctgcagtccggatccctgcacctcggcccgaaggaaggggccgagatggccgtggac
ggaggggaagaggccgtgacgctggcctcctcggaaaggacctacggcaccttcctgagc
ggcctcaccgactgcacaaacctcactttcagcaaagtgcagcgcttctgggagtccaat
tcggctgcccacaaagagatttgtgctgttctggctgctgtcacagaggtgattcgttct
gagggaggaaaggagacagagaccgagtactttgctgctctgatgacaacgctagaagca
gtggagtcccctgagtctctggccgctgtcgcttatctgctcaaccttgtcctgaagcgt
gtgccaagccctgtgcttatgaagaagttctcagacacctccaaagtttttatggatctc
ctgtccacccaggctggcggcagctccacctctgctctccgatggattctctcctgtctc
gccaccctcctgcggaaacaggacctggaggcctggggctaccctgtgacgatgaaggtg
taccatggtctactgagcttcactgtgcacgccaagcccaagatccggaaggctgcgcag
catggagtatgctcagtcctcaagggcagcgatttcatgtttggggacaaggcccctgct
caccatcctgctgctccgtccactgccaagttctgcatccaggagatggagaagtctgga
ggctctaaggaggccacgggcacactacacatgctaaccctattgaaggacctgctgccc
tgcttccctgaaggcctggtcaagagctgctgtgagactctcctaaaggtcatgaccttg
agccatgtgctggtgacagcctgtgccatgcaggccttccatggcctcttccatgccaag
cccggcccgggtacgctctcagcggaactcagtgcacagatcatcacggctttgtatgat
tatgttcccagcgaaaatgacctacagcccctgctggcctggcttaaagtcatggagaaa
gcccacatcaacctggtcaggctccagcggaacttgggcctaggccacctccctcgtttc
tttggaactgcgatgagctgcctcctctcccctcattcacaagtggtgacagctgctacc
cagagcctccaggagctcctgaaggaatgtgtggctccccacatggctgacattggttct
gtgacctccaccagtacaggccctgcccagtatgtggccaaaatgttcaggtttgtggaa
gagggcctgacatacaagttccatgcaacttggagttctgtgttgtcactgctgtgtgcc
ttcttccatgcctgtgggaggcaggcccaccccgtcatgaagaagtgcctccagtccctg
tgtgaccttcgcctttccccccacttcccccacacgacagctctggaccaggccgtgggg
gctgcagtggccagcatggggcctgaggtagttttagaggctgtgcccttggaaattgac
ggctctgaagagactctggatttcccgcggagctggctgttgcctgtcatccgggaccat
gtccaggagacacggctgggtttcttcaccacctacttcttgcctctggccaccaccctg
aagagcaaagcaatggatctggcccaggcaggcagcacagtggagtccaagatctatgac
acgctacagtggcagatctggacccttctgcctggcttttgcacaaggcccacagatgtg
gccgcctccttccgaggactggcgcggactctgggcatggccatcagtgagcgcccagac
ctcagggtcactgtgtgccaggccctgcgcactctcatcaccaagggctgtgaggcagag
gctgaccaagcagaagtgagccgttttgccaagaatttcctgccaatcctcttcaatctg
tatgggcagcctgtggcagccgatgacaccccagcccctcgccgagctgtgttggaaacc
atccgaacgtacctcaccattacagagtctcagctagtgaacagcttactggaaaaggcc
agtgtaaaggtgctcgactctgccagctctgacttcaccagattgtctgtcttggacctg
gttgtggccttggcccctcatgctgatgaagctgccatcagcaagctgtactccaccatc
cggccctacctggagagcaaggcccacggggtgcagaaaaaggcctaccgcgtgctagaa
gaggtgtgtgccagtgagcagggcccaggagcattgtttgtgcagaaccacctgaaagat
ctgaagcagaccctgctggattctctgcagagcacctcctcgcctgccaagaggccccgt
ttgaagtgcctcatccatattgtgaggaaactctcggctgagcatgaggatttcatcgcc
gccctcgtccccgaggtactcctgtgcaccaaggaagtgtccgtgggtgctcgcaagaat
gccttcaccctgctactggagatgggccgtgctttcctacgttttggtcctagctgtgaa
gaagcgctgcagcgttacctcgtcctgatctatcctggcctcgtgggcaccgtgaccatg
gtcagctgcagcatcctggcccttacccatctcctttttgaatttaaaggcctgatggga
tccaacacggtggagcagttgctgcaaaacgtgtgtcttctcctggcctctcgcactcga
gatgtggtcaagtcagcactgggcttcatcaaagtggcagctgtggccatggatgtgaca
ctcttggcaaagcacgtacatttggtgatggactctatcgggaaactctctgacgatatg
cggcgacacttccgcatgaagctccgaaatctgttcaccaagttcattcggaagtttggg
tttgagctggtgaaggggctgctgcccgcagagtaccacaaagtgctggtgaacattcgg
aaagctgaggcccgggccaagaggcaccgtgctctgaaccaggctgccatggaggacgag
tcccaggaggaggaggaagagccggcccagggcaaaggcgacagcattgaggagatcctg
gctgattcagaagatgaggaggaggaggaggatgacaggagtcggggcagagagcagcgg
aaactcgctcgccagaggagccaggcatggctgaaggaaggtggtggggatgagcccctc
aacttcctggaccccaaggtggcccagcgagtcctagctacacagcctgggctgggccaa
ggcaagaaggaccatggcttcaaggtgagtgctgatggccggctgatcatccgagaggaa
gaggaggaggagaacccggtcaaggtggaggaagaggaggacatgaaaggggaagatgaa
gagatggtggagctgatggcaaacatgggcagcatcaggagtaagaaaaattcgaagcgt
ccacaccagaaagaggcagacgacgaggagctggaggtgccccctcaataccaagctgga
ggctctggcattcatcgtcctctgaccaagaaggtggcaccaggagctgagtacaaggct
aagaaagcaaaaggggacatgaagaaaaaaggccggctggatccctatgcatacatcccc
ctcaacagaaccaagctgaaccgcaggaagaagatgaagctgcaaggccagtttaaaggc
ctggtgagagccacccagcgggggtcccaagtgggacacaagctgcgcaggaaggagcgt
cggccatga
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