Suncus etruscus (white-toothed pygmy shrew): 126033793
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Entry
126033793 CDS
T09902
Symbol
SORCS3
Name
(RefSeq) VPS10 domain-containing receptor SorCS3
KO
K27083
VPS10 domain-containing receptor SorCS3
Organism
setr
Suncus etruscus (white-toothed pygmy shrew)
Brite
KEGG Orthology (KO) [BR:
setr00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
setr04131
]
126033793 (SORCS3)
Membrane trafficking [BR:
setr04131
]
Endocytosis
Others
Others
126033793 (SORCS3)
Endosome - Lysosome transport
126033793 (SORCS3)
Endosome - Golgi transport
126033793 (SORCS3)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sortilin-Vps10
Sortilin_C
PKD
PKD_4
Motif
Other DBs
NCBI-GeneID:
126033793
NCBI-ProteinID:
XP_049646756
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All DBs
Position
17:48598709..49319840
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AA seq
1225 aa
AA seq
DB search
MEAATRTERPAGWPGAPLARTGLLLLSTWVLAGAEITWGATGGPGSPAAARASRPPALPL
LSPRAVAANSWPRELATARRGAVLGRQPRPEPLPQPRGGGQKKPGAARVPSPADAPWGPD
SPALGKAGGARRSRRAQPPSALERGDTRATVLAEDAQGSRLLAKGLREELKAPRAGGAAA
VEELRLPSTSFALTGDSAHNQAMVHWSGHNSSVILILTKLYDFNLGSVTESSLWRSTDYG
TTYEKLNDKVGLKTVLSYLYVNPTNKRKIMLLSDPEMESSILISSDEGATYQKYRLTFNI
QSLLFHPKQEDWVLAYSLDQKLYSSMDFGRRWQLVHERITPNRFYWSVAGLDKEADLVHM
EVRTSDGYAHYLTCRIQECAETTRSGPFARSIDISSLVVQDEYIFIQVTTGGRASYYVSY
RREAFAQIKLPKYSLPKDMHIISTDENQVFAAVQEWNQNDTYNLYISDTRGIYFTLAMEN
IKSSRGLMGNVIIELYEVAGIKGIFLANKKVDDQVKTYITYNKGRDWRLIQAPDVDLRGN
PVHCLLPFCSLHLHLQISENPYSSGRISSKNTAPGLLVATGNIGSELSYTDIGVFISSDG
GNTWRQIFDEEYNVWFLDWGGALVAMKHTPLPVKHLWVSFDEGHSWDKYGFTSVPLFVDG
ALVEAGVETQIMTVFGHFSLRSEWQLVKVDYKSIFSRHCTKEDYQTWHLLNQGEPCVMGE
RKIFKKRKPGAQCALGRESSGTVVSEPCVCADWDFECDYGYERHGETQCVPAFWYNPASP
SKDCSLGQSYLNSTGYRRIVSNNCTDGLREKYTAKAQMCPGKAPRGLHVVTTDGRLVAEQ
GHNATFIILMEEGDLQRTNIQLDFGDGIAVSYANFSPIEEGIKHIYKSAGIFQVTAYAEN
NLGSDTAVLFLHVVCPVEHVHLRVPFVAIKNKEVNISAVVWPSQLGTLTYFWWFGNSTKP
LITLDSSISFTFLAEGTNTITVQVAAGNALIQDTKDIAVHEYFQSQLLSFSPNLDYHNPD
IPEWRQDIGNVIKRALIKVTSVPEEQILVAVFPGLPTSAELFILPPKNLTERRKGNEGDL
EQIVELLFNALNQNLVQFELKPGVQVIVYVTQLTLAPLVDSSAGHSSSAMLMLLSVVFVG
LAVFLIYKFKRKIPWINIYAQVQHDKEQEMIGSVSQSENAPKITLSDFTEPEELLDKELD
TRVIGGIATIANSESTKEIPNCTSV
NT seq
3678 nt
NT seq
+upstream
nt +downstream
nt
atggaggcggcgacgcgcaccgagcgccccgcaggctggcccggggcgcccctcgcccgg
accgggctcctgctcttgtcgacgtgggtcctggccggcgcggagattacttggggcgcg
acgggcggtcccgggagccccgcggccgcccgggcttcgcggccaccggcgctgccgctt
ctctcgccgcgggcagtggcggcgaactcgtggcccagggagctggcgacggcgcggaga
ggcgctgttctggggcgccagcccagacccgaaccgctgccccagccgagaggcggcggc
cagaagaagcccggagccgcccgggtgccgtcgccggcggacgcaccgtggggaccggac
agcccggctttgggcaaagctggcggcgccaggagaagtcgccgcgctcagcctcccagc
gccctggaacgcggggacacccgggccacggtcttggccgaggatgcccaaggaagccgc
cttctggccaagggtctccgggaggagttgaaggcgccgcgggccggcggggcggcagcg
gtagaggagctccggctgcccagcacttcgttcgcgctgaccggggactcggcccacaac
caagccatggtgcactggtcgggacacaacagcagcgttatactgatcctgaccaagctg
tatgacttcaacctggggagcgtgacagagagctcactttggagatcaacagattatggc
accacttatgaaaagctcaatgacaaagtgggtctgaagacggtcctaagttacctctat
gtcaatcccaccaacaaaaggaagatcatgcttcttagtgatcctgaaatggagagcagt
atattgattagctcagatgaaggggcgacctatcagaaatatcgtctcaccttcaatatc
cagagtttgctctttcatcctaagcaagaggactgggtgctagcctacagtctggatcaa
aagctctacagctccatggactttggaagacgatggcagcttgtccatgaacgtatcaca
cctaacagattttactggtcggtggctggactggataaggaggcagacttggttcacatg
gaggtgcggacctcggatggatatgctcactacctcacctgcaggatccaggaatgtgct
gagacaactcgtagtgggccttttgctcgctccattgacatcagttctctggttgtccag
gatgagtatatcttcatccaggtaacaactggaggaagagctagctactatgtgtcctat
cgaagagaggccttcgctcagatcaaactgccaaagtactcactgcccaaggacatgcat
atcatcagcactgatgagaaccaagtatttgctgcagtccaggaatggaaccagaatgac
acatacaacctctacatctcagacacgcgagggatctactttaccctggcaatggaaaac
attaaaagtagcagaggtctaatgggaaacgtcattattgagttgtatgaggtagcaggt
atcaaagggatatttctggcaaacaagaaggtggatgaccaggtgaagacctacatcacc
tacaacaagggcagagattggcgtttaatacaagccccagacgtggacctaagaggaaac
ccagtccactgccttctgccattctgttccttgcacctgcacttgcagatttctgaaaat
ccatattcctcaggaagaatctccagcaagaacactgccccaggactcttggtggctaca
ggcaacattggttcggagctgtcatatactgatattggtgtgtttatctcttctgatgga
ggcaatacatggagacagatctttgatgaagagtacaatgtctggttcctagactggggt
ggcgccctcgtggccatgaaacacacacctctgcctgttaagcatttgtgggtgagtttt
gacgagggccactcctgggacaaatatggtttcacttcagttcctctctttgttgatggt
gctctggtggaagcaggagtggagacccaaatcatgacagtttttggccacttcagcctt
cgcagtgaatggcagttggtgaaagtggactataaatctatcttcagtcggcactgcacc
aaggaagattaccagacctggcaccttctcaaccagggggagccttgtgtcatgggagaa
agaaaaatattcaagaaacgcaaacctggagctcagtgtgcccttggtcgagagtcctct
gggacagtggtctcagaaccctgtgtctgtgctgactgggactttgagtgtgactatggc
tatgagagacacggagagacccaatgtgtcccagctttctggtataacccagcatcccca
tcaaaagattgcagccttggtcaaagctacttgaatagcactgggtaccggcggattgtt
tccaataactgcacagatggactgagggaaaagtacactgccaaggctcagatgtgccct
gggaaagcccctcggggtcttcatgtggtgacaactgatgggcgcctggttgcagagcag
ggccacaatgcaaccttcatcatactcatggaggagggtgatctccaaaggacaaacatc
cagcttgactttggggatgggattgctgtgtcttatgctaacttcagccctattgaggaa
ggcatcaagcacatatacaagagcgcagggatctttcaggtgacagcctatgcagagaac
aacctgggatctgacacagctgttctcttcctgcatgtggtttgccctgtggaacatgtt
catctccgagttccgtttgttgccataaaaaataaagaagtcaacatcagtgcagttgtg
tggcccagtcagctggggacccttacctatttctggtggttcggaaatagcaccaagcct
ctcatcaccttggacagcagcatttccttcacattccttgcagagggaaccaataccatc
actgtacaggtggcagcaggaaatgccctaatccaagacacaaaagacattgcagttcac
gaatattttcaatcccaactcttatcattctctcctaacttggattaccacaatcctgat
attcctgagtggaggcaagatattggtaatgtcatcaagcgagctttgattaaagtaact
agtgtcccagaagagcagattctggtggctgtgtttcctggacttcccacttcagctgaa
ctctttatcctccctcccaagaacctgacagagaggcggaaaggcaatgaaggtgacctg
gaacaaattgtggaactgctgtttaatgccttgaatcagaacttggtccagtttgaactg
aagccaggggttcaggtcatcgtgtatgtcacacagctgactttagctcctttagtggac
tccagtgctggacacagcagctcagccatgcttatgctactatcagtggtatttgttggc
ttggctgtgtttctgatctacaagtttaaaaggaaaattccctggattaacatctatgct
caagttcaacatgacaaagagcaagagatgattggatcagtaagccaaagtgaaaatgcc
cctaaaatcacactcagtgatttcactgaacctgaggaactgctggacaaagagctggat
acccgggtgattggaggcattgccaccattgcaaacagtgaaagcacaaaggagattccc
aactgcactagtgtttaa
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