Suncus etruscus (white-toothed pygmy shrew): 126033800
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Entry
126033800 CDS
T09902
Symbol
MMS19
Name
(RefSeq) MMS19 nucleotide excision repair protein homolog isoform X1
KO
K15075
DNA repair/transcription protein MET18/MMS19
Organism
setr
Suncus etruscus (white-toothed pygmy shrew)
Brite
KEGG Orthology (KO) [BR:
setr00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
setr03036
]
126033800 (MMS19)
03400 DNA repair and recombination proteins [BR:
setr03400
]
126033800 (MMS19)
Chromosome and associated proteins [BR:
setr03036
]
Eukaryotic type
Centrosome formation proteins
Spindle formation proteins
126033800 (MMS19)
DNA repair and recombination proteins [BR:
setr03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
Other NER factors
126033800 (MMS19)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
MMS19_C
MMS19_N
HEAT
HEAT_2
TOR1L1_N
Adaptin_N
Motif
Other DBs
NCBI-GeneID:
126033800
NCBI-ProteinID:
XP_049646770
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All DBs
Position
17:complement(41256768..41301505)
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AA seq
1037 aa
AA seq
DB search
MAAATAAAAATADVLEALAPPGNLGGLVQDFVLGQQDGAADLVAADVKSGSYTVLQVVEA
LGSSLENPEPRTRARGIQLLSQVLLQCHSLLLEKEVVHLILFYENRLKDHHLVIPSVLQG
LRALSMCVTLPAGLAVSLLKAIFQEVHVQSLIQVDRHTVYSIITNFMRTREEELKGLGAD
FTFGFIQVMDGEKDPRNLLVAFHIVHELISRNYSLGPFVEELFEVTSCYFPIDFTPPPND
PHGIQREDLILSLRAVLASTPRFAEFLLPLLIEKVDSEILSAKLDSLQTLNACCAVYGQK
ELKDFLPSLWASIRREVFQTASERVEAEGLAALHALTACLSSSVLRADAEDLLDSFLNSI
QQDCRHHLCEPDMKLVWPSAKLLQAAAGASARACDQITSHILPLLLEQFHKHSQSNPRRT
ILEMILGFLKLQQKWSYEDQEQRPLSGIKDQLCSLCFLALTDPSSQLQLVGIRTFTVLGA
HPDLLSIGDLEQALGHLYRLSFLEDSQNCRVAALEALGTLATLYPVAFTTSLVPKLAEEL
CVERSDLTPGEDPNRRSKHLRCLQALSAISTHPSIVKETLPLLLQHLCQLNNAGTVVATP
SDVVAVCQSLQLVAEKCQQDTASYWYFHQTALPSLLALAVKASMPEEQSVLGKVLLEDEV
LAAMVSVIGNATTHLSPELAAQSVAQIVPLFLDGNLSFLPENSFPCRFQPFQDSSLGQRR
LVALLMAFVCSLPRNVDIPQLNELMQELLELSCCPSCSFSSTAAAKCFAGLLNKHRAGKQ
LDEFLELAVNKVEAGLSAQSSRTQAFTLLLWVTKALVLRYHPLSSHLTDRLMGLLSDPEL
GPAAADGFSLLMSDCTDVLTRASHAEVRIMFRQRFFTDNVPALVQGFHTAPQDVKPHYLK
GLSHVLNRLPKPVLLLELPTLLSLLLEALSCSDQVVQLSTLRCLQPLLPEAPQVMSLHID
TLVTKFLTLSSSPSMAVRIAALQCMHALTRLPTPVLLPYKPQVIRALAKPLDDKKRLVRK
EAVSARGEWFLLGSPGS
NT seq
3114 nt
NT seq
+upstream
nt +downstream
nt
atggcggccgccaccgccgccgcggctgctactgcagacgttctggaggcgttggcgcct
ccgggcaacctagggggcctcgtgcaagacttcgtcctgggtcagcaggacggcgccgcg
gatctagtggcggcagatgtgaaatccggcagctatacagtgttacaagtggtcgaagcc
cttgggtcttcgctagagaatccagaaccccgaactcgtgcacggggaatccagcttttg
tcacaggtgctactccaatgtcactccctgctcctggagaaagaagtggtacacctgatc
ctgttctatgagaaccgcctgaaggaccatcatctcgtgatcccatctgtcctgcagggt
ttgagagcacttagcatgtgcgtgaccttgcccgcagggctagctgtctctttgcttaaa
gctatcttccaggaggttcatgtacagtccctgatacaggtggaccggcacacagtctac
agtatcatcaccaatttcatgagaactcgggaagaagagctgaagggcctaggagctgac
ttcacatttggcttcatccaggtgatggatggggaaaaggatccacgtaatcttctggtg
gcctttcatatcgtccatgagctaatttccaggaactatagcctaggacccttcgtggaa
gagctgtttgaagtgacatcctgttacttccctattgattttacccctccacctaatgat
ccccatgggatacagagagaagatctcatcctgagtcttcgagctgtgctggcttctaca
ccacgatttgctgagtttctgctgcccctgttgattgagaaagtggattctgagatcctg
agtgccaagctggactctctacagactctaaatgcttgctgtgctgtgtatgggcagaaa
gaactgaaggattttctccccagcctttgggcttctatccgtagagaggtgttccagacg
gcaagcgagcgggtggaggcagaaggcctggcagccctccatgccctaactgcctgcttg
tctagctctgtgctgagggccgatgctgaggacctccttgactccttccttaacagcatt
caacaggactgcaggcaccacctgtgtgaacccgacatgaagctggtatggcctagtgcc
aaactgttgcaggcagccgccggggcttctgcccgcgcctgcgaccaaatcaccagccac
atactcccattgctgctagaacagttccacaagcacagccagagcaacccacgacggaca
atccttgaaatgatcctgggcttcctgaaattgcagcagaaatggagctatgaagaccaa
gagcaaaggcctctgagtggcataaaggatcagctatgctcactgtgcttcctggccctg
acagaccccagctcccagctgcagcttgttggtatccgaacattcacagtcttgggtgcc
catccagatctcctgtcaattggggacttagaacaagcattgggccacttataccgacta
agttttctggaggattcccagaattgcagggtagcagcactggaagcgctgggaactcta
gccactctctaccctgtggccttcaccacctccctagtgcccaagcttgctgaggaattg
tgcgttgagagatcagacttgactccaggggaagatcccaacagacgctccaaacatctc
cgctgtctacaggccttgtctgccatttcaacacaccccagcattgttaaggagaccctt
cctttactgctgcagcatctctgccagctgaacaatgcaggaactgtggttgcgacacca
agtgatgttgttgctgtctgtcagagcctccagctggtagcagaaaaatgtcagcaggac
actgcgagctactggtatttccatcagacagccctaccctccctgcttgccctggctgtg
aaggcttccatgccagaggagcaatcagttctggggaaagtgctactagaagatgaagtt
ttggctgccatggtatctgtcattggaaatgccaccacacacttgagccctgaattggct
gcccagagtgttgcccagattgtgcccctcttcttggatggcaacttgtcctttctgcct
gaaaatagcttcccttgcagattccagcctttccaggatagctccttggggcagagacgg
ctggttgcactgcttatggcctttgtctgctccctacctcgaaatgtggatattcctcag
ctgaacgaactcatgcaggaacttttagagctgagctgctgccccagctgctccttctct
tccactgctgctgccaagtgctttgcaggactcctcaacaagcaccgtgcaggaaaacag
ctggatgaattcctggagctggctgtgaacaaagtggaggctggtctgagtgctcagtcc
tctcggactcaagccttcacactgctgctatgggtgacaaaggctctggtgcttagatac
caccctctcagctcccaccttacggaccggctcatgggtctcctgagtgatcccgagctg
ggcccagcagctgctgatggcttctctctgctcatgtctgactgcactgacgtactgaca
cgtgctagccatgcagaagtgcgaattatgttccgccagcgtttcttcactgacaatgtg
cctgctctggtccagggcttccatactgctccccaagatgtgaagccacattacctgaag
ggtctgtctcatgtgctcaacagactacccaagcctgtgctcttactagaactgcccaca
ctgctctccttactgctggaggccctatcctgctctgatcaggtggtacagctctccacg
ctccgttgtcttcagcctcttctgccggaagccccacaggtcatgagtctccatatcgac
acccttgtcaccaagtttctgaccctcagctctagcccttccatggctgtccggattgct
gccctgcagtgcatgcatgctctcactcgcctacctactcctgtgctgctgccatacaag
ccacaggtgatccgggccttagccaaacctctggatgacaagaagaggctggtgcggaag
gaagctgtgtcggccaggggagagtggtttctgctgggaagtcctggcagctga
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