Suncus etruscus (white-toothed pygmy shrew): 126033822
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Entry
126033822 CDS
T09902
Symbol
TAF5
Name
(RefSeq) transcription initiation factor TFIID subunit 5
KO
K03130
transcription initiation factor TFIID subunit 5
Organism
setr
Suncus etruscus (white-toothed pygmy shrew)
Pathway
setr03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
setr00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
126033822 (TAF5)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
setr03021
]
126033822 (TAF5)
03036 Chromosome and associated proteins [BR:
setr03036
]
126033822 (TAF5)
Transcription machinery [BR:
setr03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIID
126033822 (TAF5)
Coactivators
SAGA/TFTC/STAGA complex
126033822 (TAF5)
Chromosome and associated proteins [BR:
setr03036
]
Eukaryotic type
Histone modification proteins
HAT complexes
PCAF complex
126033822 (TAF5)
STAGA complex
126033822 (TAF5)
TFTC complex
126033822 (TAF5)
SAGA complex
126033822 (TAF5)
SLIK complex
126033822 (TAF5)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40_Prp19
WD40
TFIID_NTD2
WD40_CDC20-Fz
Beta-prop_TEP1_2nd
WD40_WDHD1_1st
Beta-prop_CAF1B_HIR1
Beta-prop_EML_2
EIF3I
Beta-prop_WDR90_POC16_2nd
NBCH_WD40
Beta-prop_EML
WD40_MABP1-WDR62_2nd
WDR55
ANAPC4_WD40
Beta-prop_SCAP
Beta-prop_IFT122_1st
Beta-prop_TEP1_C
Beta-prop_WDR75_1st
WD40_MABP1-WDR62_1st
Beta-prop_Vps41
WDR90_beta-prop_4th
Beta-prop_IFT140_1st
Beta-prop_RIG_2nd
Beta-prop_WDR19_1st
Beta-prop_EIPR1
WD_LRWD1
Beta-prop_HPS5
Beta-prop_SPT8
Beta-prop_DCAF12
RAB3GAP2_N
WD40_RFWD3
CDK5RAP3
Beta-prop_RIG_1st
eIF2A
VPS8_N
ABM-like
PROPPIN
Motif
Other DBs
NCBI-GeneID:
126033822
NCBI-ProteinID:
XP_049646802
LinkDB
All DBs
Position
17:47253259..47279225
Genome browser
AA seq
758 aa
AA seq
DB search
MAALAEEQTEVAVKLESEGPPALLPPQAGDGAGEGGGGTPSNGPNGPNGGGGTVAAASAP
GGDGGTPKASAAAAPPAPAPAPAPAGAAPGSEAGATHDRQTLLAVLQFLRQSNLREAEEA
LRREARLLEEAAAGAGAPGEPDGGGGAEALLSRVAASAGPGSAAPDPPGAAASGAGAGAA
AAAGAAASGSAPGPAAAGRVGSVTVEDQPDVSAVLSAYNQQGDPTMYEEYYSGLKHFIEC
SLDCHRAELSQLFYPLFVHMYLELVYNQHENEAKSFFEKFHGDQECYYQDDLRVLSSLTK
KEHMKGNETMLDFRTSKFVLRISRDSYQLLKRHLQEKQNNQIWNIVQEHLYIDIFDGMPR
SKQQIDAMVGSLAGEAKREANKSKVFFGLLKEPEIEVPLDDEDEEGENEEGKPKKKKPKK
DSIGSKSKKQDPNAPPQNRIPLPELKDSDKLDKIMNMKETTKRVRLGPDCLPSICFYTFL
NAYQGLTAVDVTDDSSLIAGGFADSTVRVWSVTPKKLRSVKQAADLSLIDKESDDVLERI
MDEKTASELKILYGHSGPVYGASFSPDRLWATDHYQPLRIFAGHLADVNCTRFHPNSNYV
ATGSADRTVRLWDVLNGNCVRIFTGHKGPIHSLTFSPNGRFLATGATDGRVLLWDIGHGL
MVGELKGHTDTVCSLRFSRDGEILASGSMDNTVRLWDAVKAFEDLETDDFTTATGHINLP
ENSQELLLGTYMTKSTPVVHLHFTRRNLVLAAGAYSPQ
NT seq
2277 nt
NT seq
+upstream
nt +downstream
nt
atggcggcgctggcggaggagcagacggaggtggcggtcaagttagagtcggagggaccg
ccggcgctgctccctccgcaggcgggggacggagcgggcgagggcggcggcggcaccccc
agcaacggccccaacggccccaacggcggcggcgggaccgtggcggccgcctcggcgccc
ggcggggatggcgggactcccaaagcctcggcggcggcggctcctccggctccggctccg
gctccggctcccgcgggggcggccccgggctccgaggcgggcgcgacccacgaccgccag
acgctgctggccgtgctgcagttcctgcggcagagcaacctgcgcgaagccgaggaggcg
ctgcgccgcgaggcccggctgctggaggaggcggcggcgggcgccggagccccgggagag
ccggacggcggcggcggcgccgaggcgctcctcagccgggtcgcagcctccgcggggccc
ggctccgcggcgcccgacccgcccggcgccgccgcttcgggagccggggccggagctgca
gccgctgccggggccgccgcctcgggctcagccccgggtcccgccgctgccggcagagtt
ggaagtgtaactgtggaagaccagcctgatgttagtgctgtgctgtctgcctacaaccaa
caaggagaccccaccatgtatgaggaatattacagtggactgaaacacttcattgaatgt
tcattggactgtcatcgggcagaattatcccaactcttttatcctctatttgtacatatg
tatttggaactagtctacaatcaacatgagaatgaggcaaagtcattctttgagaagttc
catggagatcaggaatgttattatcaggatgacctacgagtattatctagccttaccaaa
aaggaacacatgaaagggaatgagaccatgttggattttcgaacaagtaaatttgttctc
cgtatttcccgtgactcgtaccaactcttgaagaggcatcttcaggagaaacagaacaat
cagatatggaacatagttcaggagcacctctacattgacatctttgatgggatgcctcgg
agtaagcagcagatagatgccatggtgggaagtttggcaggagaggctaaacgagaggca
aacaaatcaaaggtattttttggtttattgaaagaaccagaaattgaagtacctttagat
gatgaagatgaggaaggagaaaatgaagagggaaaacctaagaagaagaagcctaaaaaa
gatagcattggatccaaaagcaaaaagcaagatcccaatgctccacctcagaacaggatc
cctcttcctgagttaaaagattcagataagttggataagataatgaatatgaaagaaacc
accaaacgagtccgtcttgggccagactgtttaccctccatttgtttttatacattcctc
aatgcttatcagggacttactgcagtagatgtcactgatgactcgagtttgattgctgga
ggttttgcagattcaactgttcgtgtgtggtctgtgacacccaaaaagcttcgtagtgtc
aagcaagccgcagatcttagcctcatagacaaagaatcagatgatgtcttagaaagaatc
atggacgagaaaacagcaagtgagttgaagattttgtatggtcacagtggacctgtctat
ggagccagcttcagtccagataggctttgggctacagaccactatcaacctttaaggata
tttgctggccatcttgccgatgtgaattgtaccagattccatccaaattctaattatgtt
gccacgggctctgcggatagaacagtgcggctttgggacgtcctgaatgggaactgtgta
aggatattcactggacataagggaccaattcattctttgacattttctcccaacgggaga
ttcctggctacaggagcaacagatggcagagtactactttgggatattggacatggctta
atggttggagaattaaaaggccacactgatacagtctgttcacttaggtttagtagagac
ggcgaaattttggcatcaggttcaatggataacacagtgcgattatgggatgccgtcaaa
gcatttgaagatttagagactgatgactttactacagccactgggcatataaatttacct
gagaattcgcaggaattattgttgggaacatatatgaccaaatcgacaccagttgtacac
ctccattttactcgaagaaacttggttctagctgcaggagcttatagtccacagtaa
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integrated database retrieval system
