Suncus etruscus (white-toothed pygmy shrew): 126033829
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Entry
126033829 CDS
T09902
Symbol
TWNK
Name
(RefSeq) twinkle mtDNA helicase
KO
K17680
twinkle mtDNA helicase [EC:
5.6.2.3
]
Organism
setr
Suncus etruscus (white-toothed pygmy shrew)
Pathway
setr05017
Spinocerebellar ataxia
Brite
KEGG Orthology (KO) [BR:
setr00001
]
09160 Human Diseases
09164 Neurodegenerative disease
05017 Spinocerebellar ataxia
126033829 (TWNK)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03029 Mitochondrial biogenesis [BR:
setr03029
]
126033829 (TWNK)
Enzymes [BR:
setr01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.3 DNA 5'-3' helicase
126033829 (TWNK)
Mitochondrial biogenesis [BR:
setr03029
]
Mitochondrial DNA transcription, translation, and replication factors
Mitochondrial DNA replication factors
Mitochondrial DNA maintenance factors
126033829 (TWNK)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA_25
DnaB_C
ATPase
AAA_22
AAA_16
T2SSE
AAA_29
nSTAND_NTPase5
AAA_23
AAA_19
TsaE
ABC_tran
nSTAND3
cobW
PhoH
Motif
Other DBs
NCBI-GeneID:
126033829
NCBI-ProteinID:
XP_049646812
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All DBs
Position
17:44685253..44690276
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AA seq
676 aa
AA seq
DB search
MWVLLRGGHPLRVLLPLRGEWKGRRGLPRSLGPAPPRRRYRKEALPALDGPALPITTTEI
RQYLKAHGIPFQDGHSCLRAPSPFVGDSQLKDQIAAPASSSLFIDKTTGRFLCMISLAEG
SWEDFQASVEGRGDGAREGLLPGESTAAEDSDEVLRIWERAVPLWELPEKEEAQLARVMF
GLSKVTDDTLRRFSVRYLRSARSLVFPWFSPGSLRLRGLKLLGAESQGEDVRYVETTIPR
PGAYCNLFGLPLIGRRDVELVLTSRELDSLALSQSTGLPTLALPRGTACLPPALLPYLEQ
FRRIVLWLGDDLRSWEAAKLFARKLNPKRCSLVRPGDQQPRPLEALNLGLNLTRILRSAL
PAWHKSIISFRQLREEVLGELSNVEQVAGIRWSRFPDLNRLLKGHRKGELTVFTGPTGSG
KTTFISEYALDLCTQGVNTLWGSFEISNVRLARVMLTQFAVQRLEEQLDKYDEWADRFED
LPLYFMTFHGQQSIRTVIDTMQHAVYVYDICHVVIDNLQFMMGHEQLSSDRIAAQDYIVG
AFRKFATDSNCHVTLVIHPRKEDDDKELQTASIFGSAKASQEADNVLILQDRKLVTGPGK
RYLQVSKNRFDGVVGVFPLEFNKNSLTFSIPPKSKARLKKVKDDNGLVTKKPSSGKKGAM
AQNSEAASGQAPTPTS
NT seq
2031 nt
NT seq
+upstream
nt +downstream
nt
atgtgggttcttctgcgcgggggtcaccccctccgcgtcctgctgcccctccgtggggag
tggaaggggcggaggggcctgcccagaagtctgggccccgcccccccgcgccgccggtat
cggaaggaggccctcccggctctggatggtcccgcgctgcccatcacgaccactgagatc
cgccagtacttgaaggcacacggcatccccttccaggacggccacagctgcctgcgggca
cccagcccctttgtgggggactcacagctcaaggatcagattgcagctcctgcttcctcc
agcctcttcatcgacaagaccacaggccgttttctctgcatgatcagcctcgccgaaggg
agctgggaggacttccaagccagtgtggagggtcgtggggatggggccagagaagggctc
ttgcctggcgaatccactgctgctgaggacagtgatgaagtcctaaggatctgggagcgt
gccgtacccctttgggagctgcccgagaaggaggaagcccagttggctcgggtgatgttt
ggcctcagcaaagtgacagatgacacgctcaggcgcttcagtgtgcgctatctgcggtcg
gcccgcagccttgtcttcccttggttctccccaggaagtttgaggttacggggcctgaag
ctcctgggggctgaaagccagggggaagatgtacgctacgtggaaaccaccattccccgg
cctggtgcctactgcaatctctttgggctaccactgattggtcgtcgagatgtggagttg
gttctgaccagtcgtgaactggacagtctggccttgagtcagtccacaggcctgcctact
ctggctctcccccgagggacagcctgcttgccccctgccctgctcccttatctcgaacag
tttcgaaggattgtgctctggctgggggatgaccttcggtcctgggaagctgccaaattg
tttgcccgaaaactaaaccccaagcgatgctcattggtgcgccctggagaccagcagcct
cgtcccctggaggccctgaacctaggcttaaatctgactcgcattctgcgctcggccctg
cctgcctggcacaagtcaatcatatctttccgccagcttcgggaagaggtgctaggagaa
ctgtccaatgtggagcaggtagcgggtatccgttggagtcgcttcccagaccttaaccgt
ctcctgaagggacatcgaaagggcgagctgacagtcttcacagggccaacaggcagtgga
aagaccacattcatcagtgagtatgccctggatttgtgtacccagggggtgaacacgctg
tgggggagctttgagatcagcaacgtgagactagctcgggtcatgctgacccagtttgct
gtgcagcgactagaagagcagctggacaaatatgatgagtgggctgaccgttttgaggac
ctgcccctgtatttcatgacttttcacggacagcagagcatcaggacagtaatagacaca
atgcagcatgcagtctacgtctatgacatttgtcatgtggtcattgataatctccagttc
atgatgggtcatgagcagctgtcttcagacaggattgcagctcaagattacattgtgggg
gcttttcggaaatttgcaacagacagtaactgccacgtgaccctggtcattcatccccgg
aaggaggatgatgataaggaactgcagacagcatccatatttggttcagccaaagcaagc
caggaagccgacaatgttctgatcctgcaggacaggaagctggtaactgggccaggaaaa
cgctatctgcaggtgtccaagaaccgctttgatggagttgtaggtgtctttccacttgag
ttcaacaagaattctctcaccttctctataccgccaaagagcaaagcccgactcaagaag
gtcaaagatgacaatgggctagtgaccaaaaagccctcttctggcaaaaagggtgccatg
gctcagaactctgaggctgcttcaggccaggctccaacccctactagctag
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