Salmonella enterica subsp. enterica serovar Typhimurium U288: STU288_00465
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Entry
STU288_00465 CDS
T02639
Name
(GenBank) LPS assembly outer membrane complex protein LptD
KO
K04744
LPS-assembly protein
Organism
setu
Salmonella enterica subsp. enterica serovar Typhimurium U288
Brite
KEGG Orthology (KO) [BR:
setu00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
setu02000
]
STU288_00465
Transporters [BR:
setu02000
]
Other transporters
Pores ion channels [TC:
1
]
STU288_00465
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LptD
LptD_N
Motif
Other DBs
NCBI-ProteinID:
AGK07711
LinkDB
All DBs
Position
complement(105516..107876)
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AA seq
786 aa
AA seq
DB search
MKKRIPTLLATMIASALYSHQGLAADLASQCMLGVPSYDRPLVKGDTNDLPVTINADNAK
GNYPDDAVFTGNVDIMQGNSRLQADEVQLHQKQAEGQPEPVRTVDALGNVHYDDNQVILK
GPKGWANLNTKDTNVWEGDYQMVGRQGRGKADLMKQRGENRYTILENGSFTSCLPGSDTW
SVVGSEVIHDREEQVAEIWNARFKVGPVPIFYSPYLQLPVGDKRRSGFLIPNAKYTTKNY
FEFYLPYYWNIAPNMDATITPHYMHRRGNIMWENEFRYLTQAGEGVMELDYLPSDKVYED
NHPKEGDKHRWLFYWQHSGVMDQVWRFNVDYTKVSDSSYFNDFDSKYGSSTDGYATQKFS
VGYAVQNFDATVSTKQFQVFNDQNTSSYSAEPQLDVNYYHNDLGPFDTRIYGQAVHFVNT
KDNMPEATRVHLEPTINLPLSNRWGSLNTEAKLMATHYQQTNLDSYNSDPNNKNKLEDSV
NRVMPQFKVDGKLIFERDMAMLAPGYTQTLEPRVQYLYVPYRDQSGIYNYDSSLLQSDYN
GLFRDRTYGGLDRIASANQVTTGVTTRIYDDAAVERFNVSVGQIYYFTESRTGDDNIKWE
NDDKTGSLVWAGDTYWRISERWGLRSGVQYDTRLDSVATSSSSLEYRRDQDRLVQLNYRY
ASPEYIQATLPSYYSTAEQYKNGINQVGAVASWPIADRWSIVGAYYFDTNSSKPADQMLG
LQYNSCCYAIRVGYERKLNGWDNDKQHAIYDNAIGFNIELRGLSSNYGLGTQEMLRSNIL
PYQSSM
NT seq
2361 nt
NT seq
+upstream
nt +downstream
nt
atgaaaaaacgtattcccactcttctggccaccatgatcgccagcgccctttatagtcat
caggggctggcagccgatctcgcctcacagtgtatgttgggcgtgccgagctacgatcgt
cctctggtaaaaggcgataccaacgatctgccggttactatcaatgccgataacgctaaa
ggtaactacccggacgatgccgtttttaccggcaacgtggacattatgcaggggaatagc
cgcctgcaagcggatgaagtgcagcttcatcagaagcaggcggaaggtcagccggaacct
gtacgcaccgtcgatgcgctgggtaatgtgcattatgatgacaatcaggtcatccttaaa
gggccgaagggctgggcgaacctgaacaccaaagacacgaacgtctgggaaggcgattac
cagatggtgggccgtcaggggcgcggtaaagccgatctcatgaagcagcgcggcgaaaac
cgctataccattctggaaaacggcagctttacctcctgtctgcctggctccgatacctgg
agcgtggtggggagtgaagtcatccatgaccgcgaagaacaggttgcggagatctggaac
gcccggtttaaagtaggtccggttccgatcttttatagcccctatttacagctacccgtc
ggtgacaagcgtcgctcaggtttcctgatcccgaacgcgaaatacacgaccaagaactat
ttcgagttctacttaccgtattactggaacatcgcgcccaatatggacgccaccatcacc
ccgcactatatgcaccgccgcggcaatattatgtgggagaacgaattccgttatctcacg
caggcaggcgagggagtgatggaattagattatctgccttctgataaagtctacgaggac
aatcaccccaaagagggcgataagcaccgctggttattctactggcagcactcaggcgtg
atggatcaggtgtggcgttttaacgtcgattacaccaaagtcagcgactccagctacttt
aacgatttcgacagtaagtacggttccagtaccgacggctacgcaacgcagaaattcagc
gtcggctacgccgtacaaaactttgacgctacggtgtcgaccaaacaattccaggtcttt
aacgatcaaaacaccagcagctattcagcggagccgcagttagacgttaactactaccat
aacgatctcggcccgtttgatacccggatttacggccaggcggtgcactttgttaacacc
aaagacaatatgccggaagcgacccgcgtccacctggagccaaccatcaatttgccgctc
tccaaccgctggggcagcctgaacaccgaagcgaagctgatggcgacgcactatcagcaa
acgaatctggacagctataacagcgatccaaacaataaaaataagctggaagattcggtt
aaccgcgtcatgccgcagtttaaagtcgacggtaagctcatcttcgaacgcgatatggcg
atgctggcgccggggtatacccagacgctggaaccacgcgtgcagtacctgtatgtgccg
taccgcgaccagagcggcatctataactacgattcttctttgctgcaatccgactataac
ggcctgttccgcgaccgcacttatggcggtctcgaccgtattgcttccgccaaccaggtc
acaaccggcgtcacaacacgcatttatgatgatgccgccgttgaacgttttaacgtttct
gttggtcaaatctactatttcacggagtctcgcaccggcgatgacaacattaaatgggag
aatgacgacaaaaccggttcgctggtttgggcaggcgacacttactggcgtatttcagaa
cgctgggggctgcgtagcggagtgcagtacgatacccgtctggatagcgtcgctaccagc
agcagcagcctcgaataccgtcgggatcaggatcgtctggtacagttgaactaccgctat
gccagcccggaatatattcaggctacgttgccttcgtattattccacggcagagcagtat
aaaaacggcatcaatcaggtgggcgcggtggcaagttggccgattgccgatcgctggtcg
attgtcggcgcgtactacttcgataccaattcgagcaaacctgcagaccagatgctcggc
ttgcagtacaactcttgctgctatgcgatccgcgtcggatacgaacgtaagctgaacggt
tgggataacgataaacaacacgcgatttatgataacgcgattggcttcaacattgagctg
cgcggtttgagctctaactacggcctcggcacgcaagaaatgttgcgttcgaacattctg
ccgtaccaaagctctatgtaa
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