Salmonella enterica subsp. enterica serovar Typhimurium U288: STU288_01320
Help
Entry
STU288_01320 CDS
T02639
Name
(GenBank) ATP-dependent RNA helicase SrmB
KO
K05590
ATP-dependent RNA helicase SrmB [EC:
5.6.2.7
]
Organism
setu
Salmonella enterica subsp. enterica serovar Typhimurium U288
Brite
KEGG Orthology (KO) [BR:
setu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
setu03009
]
STU288_01320
Enzymes [BR:
setu01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
STU288_01320
Ribosome biogenesis [BR:
setu03009
]
Prokaryotic type
rRNA helicases
STU288_01320
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
AAA_19
AAA_22
CMS1
DUF561
Motif
Other DBs
NCBI-ProteinID:
AGK07880
LinkDB
All DBs
Position
complement(306550..307884)
Genome browser
AA seq
444 aa
AA seq
DB search
MTVTTFSELELDESLLDALQDKGFTRPTAIQAAAIPPALDGRDVLGSAPTGTGKTAAYLL
PALQHLLDFPRKKSGPPRILILTPTRELAMQVADHARELAKHTHLDIATITGGVAYMNHA
EVFSENQDIVVATTGRLLQYIKEENFDCRAVETLILDEADRMLDMGFAQDIEHIAGETRW
RKQTMLFSATLEGDAIKDFAERLLEDPVEVSANPSTRERKKIHQWYYRADNFEHKVALLK
HLLKQDDATRSIVFVRKRERVHELAETLRLAGINNCYLEGEMAQIKRNEGIKRLTDGRVN
VLVATDVAARGIDIPDVSHVINFDMPRSGDTYLHRIGRTGRAGRKGTAISLVEAHDHLLL
LKIGRYIEEPLKARVIDELRPTTRAPSEKLTGKPSKKVLAKRAEKKKEKEKEKPRVKKRH
RDTKNIGKRRKPSGTKMQEQSSEE
NT seq
1335 nt
NT seq
+upstream
nt +downstream
nt
atgactgtaacgactttttccgaacttgaactcgacgaaagcctgctggatgccctccag
gataaaggtttcactcgcccgaccgccattcaggctgccgccattccgcctgcgctcgat
ggccgtgatgtactcggttctgcgccgacaggcaccggtaaaacggcggcatatctgctg
ccggcgttgcagcacctgctcgactttccgcgtaaaaaatcggggccgccgcgcattctg
atcctgacgccaacccgcgaactggcaatgcaggttgccgatcacgctcgtgaactggct
aagcatactcatctggatatcgccacgattaccggcggcgtggcctatatgaaccatgct
gaagtgtttagcgaaaaccaggatatcgtggtcgccacgacgggccgtctgctgcaatat
ataaaagaagagaactttgactgccgggcggttgaaacactgatccttgacgaagctgac
cggatgctcgacatgggcttcgctcaggacattgaacatatcgctggtgagacccgctgg
cgtaaacaaacgatgctgttctccgccacgctggaaggcgatgcgattaaagattttgcc
gagcgcctgctggaagacccggttgaggtttctgccaatccgtcaacccgcgagcgtaag
aaaattcaccagtggtactaccgtgccgacaatttcgaacataaagttgcgctgttgaag
cacctgctaaaacaagacgatgcaacccgttctatcgtgtttgtacgtaaacgtgaacgc
gtccatgaattggctgaaacactgcgtctggcagggatcaacaattgctatcttgaaggt
gagatggcgcagatcaaacgtaacgaaggtattaagcgtctcaccgacggtcgcgttaac
gtgctggtcgcgaccgacgtcgcggcacgcgggattgatattcctgacgtcagccacgtc
attaacttcgacatgccgcgcagtggcgatacctatctgcatcgcattggtcgtacaggc
cgtgctggccgcaaaggcactgcaatctcgctggtagaagcccacgaccatctgttgctg
ctgaaaatcggtcgctacatcgaagagccgctaaaagcgcgcgtcattgatgagcttcgc
ccgaccacgcgtgcgcctagcgaaaagttgaccggcaaaccgtcgaaaaaagtgctggcg
aaacgcgccgagaagaaaaaagagaaagaaaaagagaagccgcgcgtgaagaaacgtcac
cgcgatacaaaaaatatcggtaagcgccgcaagccaagcggtacgaaaatgcaggagcaa
tccagcgaagagtga
DBGET
integrated database retrieval system
