Salmonella enterica subsp. enterica serovar Typhimurium U288: STU288_02410
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Entry
STU288_02410 CDS
T02639
Name
(GenBank) L,D-transpeptidase
KO
K19236
L,D-transpeptidase YcfS
Organism
setu
Salmonella enterica subsp. enterica serovar Typhimurium U288
Pathway
setu01503
Cationic antimicrobial peptide (CAMP) resistance
Brite
KEGG Orthology (KO) [BR:
setu00001
]
09160 Human Diseases
09175 Drug resistance: antimicrobial
01503 Cationic antimicrobial peptide (CAMP) resistance
STU288_02410
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
setu01002
]
STU288_02410
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
setu01011
]
STU288_02410
Peptidases and inhibitors [BR:
setu01002
]
Cysteine peptidases
Family C82
STU288_02410
Peptidoglycan biosynthesis and degradation proteins [BR:
setu01011
]
Peptidoglycan biosynthesis and degradation
Transpeptidase
STU288_02410
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ldt_C
YkuD
LysM
Motif
Other DBs
NCBI-ProteinID:
AGK08096
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All DBs
Position
complement(513055..514020)
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AA seq
321 aa
AA seq
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MFNNTRLSRWWALLALTATIMLALPAQANTWPLPPPGSRLVGENKFHVVEDDGGSLEAIA
KKYNVGFLALLQANPGIDPYVPRAGSVLTIPLQTLLPDAPREGIVINLAELRLYYYQPGK
NTVTVYPIGIGQLGGDTLTPTMVTTISDKRANPTWTPTANIRARYKAQGIDLPAVVPAGP
DNPMGHHAIRLAAYGGVYLLHGTNADFGIGMRVSSGCIRLRDGDIETLFRQVTPGTKVNI
INTPIKASVEPGGVRLVEVHQPLSKNIGDDPQVLPIVLNGPMQAFKDAPQTDAAVMEHVM
EVRSGMPVDVTRQAEAKPQSL
NT seq
966 nt
NT seq
+upstream
nt +downstream
nt
atgttcaacaatacgcgactctctcgctggtgggcgttgcttgcgcttaccgcgaccatc
atgcttgcccttcccgcgcaggcgaatacgtggcctcttccgccccccggcagtcgactg
gtgggagaaaataaattccatgtcgttgaagacgacggcggctcgctggaggcgatcgcc
aaaaaatataacgtgggctttttagccctgttacaggccaaccccggcattgatccttat
gtgccacgcgcaggcagcgtgctaacgattccgctgcaaacgctgctaccggacgcgcca
cgtgaaggtatcgtcattaacctcgcggaattacggctttactattatcaaccggggaaa
aatacggtcacggtctaccctatcgggattggccaactgggcggcgataccctgacgcca
acgatggtgacgaccatttcggataaacgcgccaatccaacctggacgccgaccgccaat
attcgcgcccgttataaagcgcaaggtatcgatctccccgccgtggtgcctgccggtccc
gataacccaatgggacatcacgcgattcgtttagcggcctacggcggcgtctatctgtta
catggcacgaatgccgattttggcattggtatgcgcgtcagttccggctgtatccgtctg
cgcgacggtgatatagagacattgttccgtcaggtcacgccgggaaccaaagtgaatatt
atcaatacgccgattaaagcctcggtggagccaggcggcgtgcgactggtggaagttcat
cagccgctgtctaaaaatataggcgacgatccgcaggtgttgccgattgtgctgaatggc
ccgatgcaggcctttaaggacgcgccgcagaccgatgctgcggtgatggaacatgttatg
gaagtgcgttccggaatgccggtggatgtaacccgtcaagcagaggcgaaaccgcagtcg
ctgtaa
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