Salmonella enterica subsp. enterica serovar Typhimurium U288: STU288_06170
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Entry
STU288_06170 CDS
T02639
Symbol
fliA
Name
(GenBank) flagellar biosynthesis sigma factor
KO
K02405
RNA polymerase sigma factor FliA
Organism
setu
Salmonella enterica subsp. enterica serovar Typhimurium U288
Pathway
setu02020
Two-component system
setu02040
Flagellar assembly
Brite
KEGG Orthology (KO) [BR:
setu00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
STU288_06170 (fliA)
09140 Cellular Processes
09142 Cell motility
02040 Flagellar assembly
STU288_06170 (fliA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
setu03021
]
STU288_06170 (fliA)
09183 Protein families: signaling and cellular processes
02035 Bacterial motility proteins [BR:
setu02035
]
STU288_06170 (fliA)
Transcription machinery [BR:
setu03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
STU288_06170 (fliA)
Bacterial motility proteins [BR:
setu02035
]
Flagellar system
Flagellar assembly proteins
Stator
STU288_06170 (fliA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r3
Sigma70_r4
Sigma70_r2
Sigma70_r4_2
Rv2175c_wHTH
UPF0147
SapB_1
Motif
Other DBs
NCBI-ProteinID:
AGK08842
LinkDB
All DBs
Position
complement(1259505..1260224)
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AA seq
239 aa
AA seq
DB search
MNSLYTAEGVMDKHSLWQRYVPLVRHEALRLQVRLPASVELDDLLQAGGIGLLNAVDRYD
ALQGTAFTTYAVQRIRGAMLDELRSRDWVPRSVRRNAREVAQAMGQLEQELGRNATETEV
AERLGIPVAEYRQMLLDTNNSQLFSYDEWREEHGDSIELVTEEHQQENPLHQLLEGDLRQ
RVMDAIESLPEREQLVLTLYYQEELNLKEIGAVLEVGESRVSQLHSQAIKRLRTKLGKL
NT seq
720 nt
NT seq
+upstream
nt +downstream
nt
gtgaattcactgtataccgctgaaggtgtaatggataaacactcgctgtggcagcgttat
gtaccgctggtgcgtcacgaagcattgcgcctgcaggtgcgattgccggcgagcgtggaa
ctggacgatctgctacaagcgggcggcatcgggttattaaatgcggtcgaccgatatgac
gctttgcaaggaacggcatttaccacttacgcagtgcagcgtattcgtggggcgatgctg
gatgaattacgcagccgcgattgggtgccgcgtagcgtccggcgtaatgcccgcgaagtg
gcgcaggcgatgggacaactggagcaggaactggggcgtaatgcgacggaaaccgaagtg
gcggaacgtcttggcatccctgttgcggagtatcgtcagatgttgctcgataccaacaac
agccaacttttctcttacgatgagtggcgggaagagcatggcgatagcatcgaactggtg
actgaagaacatcaacaggaaaacccgttacatcaactgctggagggcgacctgcgacag
cgggtaatggatgcgattgaatcgctgccggaacgcgagcaactggtgttaacgctgtat
taccaggaagagctcaatctcaaagagattggcgcggtactggaagtcggcgaatcgcgg
gtcagccagttgcatagtcaggccatcaaacgattacgcaccaaactgggtaagttatag
DBGET
integrated database retrieval system
