Salmonella enterica subsp. enterica serovar Typhimurium U288: STU288_06300
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Entry
STU288_06300 CDS
T02639
Symbol
rcsA
Name
(GenBank) colanic acid capsular biosynthesis activation protein A
KO
K07781
LuxR family transcriptional regulator, capsular biosynthesis positive transcription factor
Organism
setu
Salmonella enterica subsp. enterica serovar Typhimurium U288
Pathway
setu02020
Two-component system
setu02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
setu00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
STU288_06300 (rcsA)
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
STU288_06300 (rcsA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
setu03000
]
STU288_06300 (rcsA)
Transcription factors [BR:
setu03000
]
Prokaryotic type
Helix-turn-helix
LuxR family
STU288_06300 (rcsA)
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
GerE
HTH_40
Motif
Other DBs
NCBI-ProteinID:
AGK08868
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Position
1282185..1282808
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AA seq
207 aa
AA seq
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MSTIIMDLCSYTRLGLSGYLVSRGVKKREINDIETVDELAIACGAHQPSVVFINEDCFIH
TPSDSQQIKQIINQHPDTLFIVFMAIANVHFDEYLLVRKNLLISSKSIKPDSLDTLLGDI
LKKESGISGTINLPTLSLSRTESSMLRMWMEGQGTIQISDRMNIKAKTVSSHKGNIKRKI
KTHNKQVIYHVVRLTDNVTNGIFVNMR
NT seq
624 nt
NT seq
+upstream
nt +downstream
nt
atgtcaacgattattatggatttgtgcagttacacccggctagggttaagcgggtatctg
gtcagcagaggggtgaaaaaaagggaaatcaacgacatcgaaaccgttgacgaactcgct
atcgcttgtggcgcgcatcagccttcggtggtgtttattaatgaggactgtttcattcat
acgccttcagacagtcaacaaataaagcaaatcattaatcaacatcctgacacgttattt
attgtttttatggcaattgctaatgtgcattttgatgaatatttattagtaagaaaaaac
ttattgattagctcgaaatcgattaaacctgactcgctggatacccttcttggcgatatt
ctgaaaaaagagtcgggtatttcaggaaccataaatttaccaacattatcgttaagtcga
actgaatccagcatgttgcgaatgtggatggaaggtcagggaaccattcagatttctgac
agaatgaatattaaagcaaaaacagtatcctcccataaggggaatataaaaagaaagata
aaaacgcataataaacaagtgatctatcacgtagtacggctgacagataacgtcactaac
ggcatttttgttaacatgcgctga
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