Salmonella enterica subsp. enterica serovar Typhimurium U288: STU288_06950
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Entry
STU288_06950 CDS
T02639
Name
(GenBank) glycosyl transferase
KO
K13684
putative colanic acid biosynthesis glycosyltransferase WcaC [EC:2.4.-.-]
Organism
setu
Salmonella enterica subsp. enterica serovar Typhimurium U288
Pathway
setu00543
Exopolysaccharide biosynthesis
Brite
KEGG Orthology (KO) [BR:
setu00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00543 Exopolysaccharide biosynthesis
STU288_06950
09180 Brite Hierarchies
09181 Protein families: metabolism
01003 Glycosyltransferases [BR:
setu01003
]
STU288_06950
Glycosyltransferases [BR:
setu01003
]
Polysaccharide
Bacterial polysaccharide (excluding LPS)
STU288_06950
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Glyco_transf_4
Glyco_trans_1_4
Glycos_transf_1
GT4-conflict
Motif
Other DBs
NCBI-ProteinID:
AGK08998
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Position
complement(1409707..1410924)
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AA seq
405 aa
AA seq
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MNILQFNVRLAEGGAAGVALDLHLRALQKGLTSHFVYGYGKGGKKSVSHHRYPQVIKQTP
RGTAIANIALFRFLNRDLFGNLDNLYRTVIQTSGPLVLHFHVLHSYWLNLADIVTFCEKV
KAQKPDVTLVWTLHDHWSVTGRCAFTDGCEGWKSGCQKCPTLSNYPPVRVDRAHQLIDGK
RQRFRDMLRLGCRFISPSQHVAEAFNSVYGAGRCQIINNGIDLATEAILAQLSPVPLNPG
KPRIAIVAHDLRYDGKTDQRLVHDMMALGEKIELHTFGKFSPFTGQNVVNHGFETDKRKL
MSALNEMDALVFSSRVDNYPLILCEALSIGVPVIATHSEAAQEVLAKSGGQTFAATDVLR
LAQRRKPEIAQAVFGATLDAFRMRSRVAYSGQQMLEEYVSFYQNL
NT seq
1218 nt
NT seq
+upstream
nt +downstream
nt
atgaatattctgcaatttaatgtacggctggcggaaggcggcgcggcgggagtggcgttg
gatctccatctgcgggcgctgcaaaaagggctgacgtcgcattttgtttatggttatggc
aaaggcggaaaaaaaagcgtcagccaccaccgttatccgcaggtgataaaacagacgccg
cgcggcacggcaatcgctaatatcgcgctgtttcgtttcctgaatcgcgatctgtttggc
aatctcgacaatctttaccgcacggttatccagacatccggcccgctggtgctgcatttt
catgttctccacagttactggctaaacctggcggacatcgtgacgttttgcgaaaaagtc
aaagcgcaaaaaccagacgtcacgctggtctggacgttgcacgatcactggagcgtcacc
gggcgttgcgccttcaccgacggttgcgagggctggaaaagcggctgccaaaaatgcccg
accctaagcaattatccgccggttagggtggatcgggcgcaccagcttattgacggcaaa
cgtcagcgctttcgggacatgctgcggctgggctgccggtttatttcgccgagccagcac
gtggccgaggcctttaacagcgtttatggcgcggggcgctgccagattattaacaacggt
atcgatctggcgaccgaggcgattctcgcgcagctatcacctgtgccgctgaatccggga
aaaccgcgaattgccattgtggcgcatgacttgcgttatgacggcaaaactgaccagcgt
ctggtacacgacatgatggcgctgggcgaaaaaattgaactgcataccttcggtaaattt
tcgccttttaccggccaaaacgttgttaatcacggttttgaaaccgataagcgcaaatta
atgagcgcgctcaatgagatggatgcgctggtctttagctcgcgggtcgataactatccg
ctgatcttgtgtgaagcgctctcgatcggcgtaccggtaatcgccacccacagcgaggcg
gcgcaggaggtgctggcgaaatccggcggccagacttttgccgctacagatgtactgcgc
ctggcgcagcggcgtaagccagagattgctcaggcggtatttggcgccacgctggacgcc
tttcgtatgcgtagccgcgtcgcgtacagcggtcaacagatgctggaggagtatgtctcg
ttctatcagaatctgtag
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