Salmonella enterica subsp. enterica serovar Typhimurium U288: STU288_08185
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Entry
STU288_08185 CDS
T02639
Name
(GenBank) diaminopimelate decarboxylase
KO
K23385
D-ornithine/D-lysine decarboxylase [EC:
4.1.1.116
]
Organism
setu
Salmonella enterica subsp. enterica serovar Typhimurium U288
Pathway
setu00310
Lysine degradation
setu00470
D-Amino acid metabolism
setu01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
setu00001
]
09100 Metabolism
09105 Amino acid metabolism
00310 Lysine degradation
STU288_08185
09106 Metabolism of other amino acids
00470 D-Amino acid metabolism
STU288_08185
Enzymes [BR:
setu01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.1 Carboxy-lyases
4.1.1.116 D-ornithine/D-lysine decarboxylase
STU288_08185
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Paralog
GFIT
Motif
Pfam:
Orn_Arg_deC_N
Orn_DAP_Arg_deC
Ala_racemase_N
Motif
Other DBs
NCBI-ProteinID:
AGK09245
LinkDB
All DBs
Position
complement(1684706..1686103)
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AA seq
465 aa
AA seq
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MTDSIMQNYNQLREQVINGDRRFQHKDGHLCFEGVDLDALARQYPTPFYVFSEPEIIRNI
HEIQQAFAAHKNTKTFFASKTCSVMGVLKAIRDAGICAEANSQYEVRKCLEIGFRGDQIV
FNGVVKKPADLEYAIANDLYLINVDSLYELEHIDAISRKLKKVANVCVRVEPNVPSATHA
ELVTAFHAKSGLDLEQAEETCRRILAMPYVHLRGLHMHVGDQVPESEPFAKATKVLVDES
RRLEEVLGIKFDLINVGGGIPVPYKYDDENGDPLKDNMYAGITAQDFADAVIREVHKWRT
DVEICIEPGRKVTGSAAVLLTEVSCEKRKTNYDLNGNVECHVEWKFVDAGYSVLSDSQHF
DWFFYVYNASRMTAAHDAWIKLAGPLCDGGDYFHMGVKGEEFLLPKETHVGDIVAFLDAG
AYTIESQTVYNNRPRTGVVMIDKNGDTRLIRREDSYEDMVKYDIY
NT seq
1398 nt
NT seq
+upstream
nt +downstream
nt
atgactgactcgattatgcagaattacaaccagctacgtgagcaggtaatcaacggcgat
cgccgtttccagcacaaagacggtcatttgtgttttgaaggggtcgatctggacgctctg
gcgcgccagtaccccacgccgttctatgtgttttctgagccggagattattcgtaacatt
catgaaatccagcaggcatttgcggcgcataaaaataccaaaaccttctttgcgtcaaaa
acctgctcggtcatgggggtgttgaaagccattcgtgacgccggaatttgcgcggaggca
aactcacaatatgaggttcgcaagtgcctggagataggctttcgcggcgatcagatcgtc
ttcaacggcgtggtgaaaaagcctgccgatctggaatatgccatcgccaacgatctgtat
cttattaatgttgatagcctgtatgagctggaacatattgatgccatctctcgcaagctg
aagaaagtcgccaatgtttgcgtccgcgtagaaccgaatgttccctcggcgacgcatgcg
gaactggttaccgctttccatgcgaagtcgggtctcgacctggaacaggcggaagaaacc
tgccgccgcattctggcgatgccttatgtgcatttgcgcggcttgcatatgcatgtgggc
gatcaggtgccggagtcagagcctttcgcaaaagcgactaaagtgctggtggatgaatcc
cgtcgcctggaagaggtgcttggtattaaatttgatttgatcaacgtgggcggcggaatt
ccggttccctataaatatgacgacgagaatggcgacccgttaaaagataatatgtatgcc
ggtattaccgcccaggattttgccgatgcggtcattcgcgaagtgcataaatggcgtacc
gatgtggaaatatgtattgaaccgggacgtaaagtgaccgggtcggcggcggttttactt
acggaagtctcctgcgaaaaacgtaaaacaaattacgatcttaacggcaatgtggaatgc
cacgttgaatggaaatttgtcgacgctggttacagcgtactctctgacagccagcatttt
gactggttcttttatgtctataacgcctctcgcatgacggcagcgcacgacgcctggata
aaattagccgggccgctgtgtgatggcggagattatttccacatgggagtgaaaggcgaa
gagtttttactgccgaaggagactcatgttggcgatattgtcgcatttcttgatgccggg
gcatacaccattgaaagtcaaaccgtttataacaaccgtccgcgcacgggcgtggtgatg
atcgataaaaatggtgacacgcgtctgattcgtcgggaagacagttacgaagatatggtc
aagtacgacatttattaa
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