Salmonella enterica subsp. enterica serovar Typhimurium U288: STU288_08915
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Entry
STU288_08915 CDS
T02639
Name
(GenBank) AIDA autotransporter-like protein ShdA
Organism
setu
Salmonella enterica subsp. enterica serovar Typhimurium U288
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Gene cluster
GFIT
Motif
Pfam:
PATR
Autotransporter
AC_1
Motif
Other DBs
NCBI-ProteinID:
AGK09391
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All DBs
Position
complement(1840316..1846426)
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AA seq
2036 aa
AA seq
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MYVVASELARGHSKVKAQVCASETHSPNQKSEYGQIIKATRAALACAVAAALGFFSPLAM
ADNQVSYADAQPHVLDASTPPISYSGTDEGAALYVSGVATVGWQPTTVTGTGLVIETSGG
GADDPDGGKYVSNAISLDHYAILELTDAKITTTGIYTQGISAADGSTLRLTDSTLTIDGN
FGVMTLYTGSEATLDGTIVEAANSSSAQVQQGSTLNVLDGSTITLAQGQINVVAGNTATD
EGSTLNLSDSSVSSAGTMSTIQGTNKAALNLTNATITHTNASGAAVQANNATTLDITGGN
ITSAGTGVYILASDARIDGATINADGDGIFITSKRKLDGYEDLNALTVSDANVTSKTVAL
NIDGSTTINDPIELTNSTFTAPTAIKLGSKATIQAEKTMLTGNIVQTDASSSSLSLSQGS
TLTGSVDAMFTTLSLDDTSQWNMTDPSTVGNLTNDGDITLGNASGSTGTLLTVDNTLTLQ
DGSQINATLDTANSAPIIKAANVTLDGTLNLSSTATFVAPETDEHFGSITLIDSQTAITT
DFDSVTLDADTSAMPDYLTINAGVDANDNTNYELSTGLSWYAGANSARAAHGTFTVDAGS
TFTVTSELDETTATSNWNGSKLTKQGDGTLILSNTGNDYGDTEIDGGILAAKDAAALGTG
DVTIAESATLALSQGTLDNNVTGEGQIVKSGSDELIVTGDNNYSGGTTISGGTLTADHAD
SLGSGDIDNSGVLKVGEGELENILSGSGSLVKTGTGELTLSGDNTYSGGTTITGGTLTAD
HADSLGSGDIDNSGVLQVGEGELENTLSGSGSLVKTGTGELTLSGDNSYSGGTTIIGGTL
TADHADSLGSGDIDNSGVLKVGEGDLENTLSGSGSLVKTGTGELTLSGGNDYSGGTTIIG
GTLTADHADSLGTGAVANSGVLQVGEGELENTLSGSGSLVKTGTGELTLSGDNSYSGGTT
IIGGTLTADHADSLGTGAVANSGVLQVGEGELENTLSGSGSLVKTGTGELTLGGDNSYSG
ATTITDGTLIAANVNALGSGNIDNSGTLILDANGAFELANVTTHSGATTALAAGSTLDAG
QFTQEDGSTLSIDLGAATDDAVITADSVALGGTLNVTGIGSVTDSWTPEAYTYTLIGSDS
AITTDFDDLTVAGMNREDVDFLTIDGKVDEADNTHYDLTASLSWYADRDNATTDAHGTFT
LSDPDGSFNVAATLTDVDDTLDPGSRWDGKSLTKEGAGTLILSGDNDYSGGTTINEGTLV
AASTTALGTGLVDNNATLVLDADGEVSAVGGITTHSGATTQLALGTSLDLGDSALIQQDG
STLNVELNSDSVQPLITGSSATLGGDLVVSDASLQARASDAEFQSFKLMDMTSDISGDFT
SLTMNLTDKPDYLTVTGTINPEDASEYLLTEGLSWNATATSATPAHGTFTLGAGDSFEVT
SVLGDKTGNGDWDGKSLTKLGAGKLTLSGANTYSGDTNVQEGTLWLSGDGSIGEMGSQQA
VNVASGATFGGSNGTTVNGKVTNEGTLVFGNSEETGAIFTLNGDLINMGTMTSGSSSSTP
GNTLYVDGNYTGNGGSLYLNTVLGDDDSATDKLVITGDASGTTDLYINGIGDGAQTTNGI
EVVDVGGVSTSDAFELKNEVNAGLYTYRLYWNESDNDWYLASKAQSDDDDSGGDDTPSDG
GDDGGNVTPPDDGGDGGNVTPPDDGGDGGDVTPPDHGGDVAPQYRADIGAYMGNQWMARN
LQMQTLYDREGSQYRNADGSVWARFKAGKAESEAVSGNIDMDSNYSQFQLGGDILAWGNG
QQSVTVGVMASYINADTDSTGNRGADGSQFTSSGNVDGYNLGVYATWFADAQTHSGAYVD
SWYQYGFYNNSVESGDAGSESYDSTANAVSLETGYRYDIALSNGNTVSLTPQAQVVWQNY
SADSVKDNYGTRIDGQDGDSWTTRLGLRVDGKLYKGSRTVIQPFAEANWLHTSDDVSVSF
DDATVKQDLPANRAELKVGLQADIDKQWSVRAQVAGQTGSNDFGDLNGSLNLRYNW
NT seq
6111 nt
NT seq
+upstream
nt +downstream
nt
atgtatgtcgtggcttcagaactggcgcgaggccacagcaaagttaaagcgcaagtatgc
gcgagtgaaacccattctccaaaccaaaagtccgaatatggacaaataataaaagcaacg
cgcgcggcgctggcttgcgccgtggctgcggcgctcggatttttcagcccgctggctatg
gccgataatcaggtatcatatgctgatgcgcagccccacgttctggatgcgtcaacgccg
ccgataagctattcgggcaccgatgaaggcgcggcgctatatgtctcgggtgtcgccacc
gtcggctggcagcccaccacggtcacagggacggggctcgtcattgaaacaagcggaggc
ggggctgatgatccggatggcggtaagtatgtttccaacgccatttcgctggatcattac
gctatccttgagcttaccgacgcgaagataaccactacgggtatttatacccagggtatt
tccgcagcggatggcagcacactgaggttaacagacagtacgctaacgattgacggcaat
ttcggcgtaatgacgttgtatacgggttcagaagcaacgctggacggtaccatcgttgag
gcagctaacagcagcagcgcgcaggtgcaacaaggcagtacgctgaacgtgctggacggt
agcacaatcaccctggcgcaaggccagataaacgttgttgccggaaacaccgcgacagac
gagggttccaccctgaacctgtctgatagctcggtcagctctgcaggtacgatgagcacc
atccagggtaccaataaggccgctcttaatctcaccaacgcgaccataacacataccaat
gccagcggcgcggcggtacaggccaataacgccactaccctggatattacaggcggcaac
attacctctgccggtacgggcgtgtatattctggcgtcggacgccaggatcgacggcgcc
accatcaacgccgacggcgacggtatctttataaccagcaaaagaaaactcgacgggtat
gaggatctcaacgcgctgacggtcagcgacgcaaacgtcacctcaaaaactgtcgcactg
aacattgatggcagcacgaccattaacgaccccattgagctcaccaacagcacctttacg
gcgccgaccgcgatcaaattaggcagcaaagcgactattcaggccgaaaaaacgatgctg
accggcaacattgtccagactgacgcgtcatcgtcatcgctctctttaagccaggggtcc
acgttaaccggtagtgtagatgcgatgtttactacgctgtcgctcgacgacaccagccag
tggaacatgaccgacccgtcaaccgtcggcaatctgaccaacgacggcgatattacgctg
ggcaacgcgagcggttcgacaggtacgctgctgacggtggacaataccctgaccttgcag
gacggcagccagataaacgcgacgctggataccgccaacagcgcgccaattatcaaagcc
gccaacgtcacgctggacgggacgctgaaccttagctcaacggccacctttgtcgcgccc
gaaaccgacgaacactttggatcgatcacgctgattgattcgcaaactgcaatcactacc
gattttgacagcgtaacactggatgctgacacctccgctatgccggattatctgacgatc
aacgcgggcgttgatgcgaatgataataccaactacgagttgtctacgggcttgagttgg
tacgcgggcgcaaattctgcgcgcgctgcgcatggcacttttaccgttgatgcaggcagt
acctttaccgtcaccagcgaactggacgaaaccacggcgacctccaactggaacggcagc
aagctaaccaaacaaggcgacggcacgctgatcctcagcaacaccggcaacgactacggc
gatactgaaattgacggcggcattctggccgccaaagacgccgccgcgctcggcactggc
gatgtgacgattgcagaaagcgcaacgcttgcgctgagccagggcacgctggataacaac
gtgaccggcgagggccaaattgtcaaaagcggtagcgatgagctgatcgtgaccggcgat
aacaactacagcggcggcaccactatttccggcggtacgctgacggctgaccatgcggat
tcgctgggcagcggcgatatcgacaacagcggcgtgcttaaggtgggcgaaggcgagctg
gaaaacatcctttccggcagcggctcgctggtgaaaaccggcacaggcgagctgacgcta
agcggcgacaacacttactccggcggcaccaccattaccggcggtacgctgacggctgac
catgcggattcgctgggcagcggcgatatcgataacagcggcgtgcttcaggtcggcgag
ggcgagctggaaaatacgctttccggcagcggttcgctggtcaaaaccggtacgggcgaa
ctgacgttaagcggcgataacagttactccggcggcaccaccattatcggcggtacgctg
acggctgaccatgcggattcgctgggcagcggcgatatcgataacagcggcgtgcttaag
gtgggcgaaggcgatctggaaaatacgctttccggcagcggttcgctggtgaaaaccggt
accggcgagctgacgttaagcggcggcaacgattactccggcggcaccaccattatcggc
ggtacgctgacggctgaccatgcggattcgctgggtaccggagctgttgccaacagcggt
gtgcttcaggtcggtgagggcgagctggaaaatacgctttccggcagcggttcgctggtc
aaaaccggtacgggcgaactgacgttaagcggcgataacagttactccggcggcaccacc
attatcggcggtacgctgacggctgaccatgcggattcgctgggtaccggagctgttgcc
aacagcggtgtgcttcaggtcggtgagggcgagctggaaaatacgctttccggcagcggt
tcgctggtcaaaaccggtaccggcgagctgacgttaggcggcgacaacagctattccggc
gccaccactatcactgacggcacgctgattgccgccaacgtcaacgcgctgggcagcggc
aatatcgacaacagcggtacgctgatactggatgccaacggcgcatttgagcttgcgaac
gtcaccacccatagcggcgccactaccgcgctggcagcgggcagcacccttgacgcgggc
cagttcacccaggaagacggcagtacgctaagtattgacctcggcgcggccaccgacgac
gccgtgattaccgccgacagcgtcgcgctgggcggcacgctgaatgttaccggcattggc
agcgttacagacagctggacgcctgaggcatacacctacacgctgattggcagcgacagc
gccattacgaccgatttcgacgatctgaccgtcgcgggaatgaatagagaagatgttgac
ttcctgactatcgacggaaaagtcgatgaagcagacaacacccactatgatctgacggcc
tccctctcctggtatgcggacagagacaacgccactaccgacgcccacggcacctttacc
ctgagcgaccctgacggcagctttaacgttgcggctacactgacagacgttgacgatacg
ctggatccgggtagcagatgggacggtaaatcgctgaccaaagaaggcgcaggcacgctg
atcctctctggcgacaacgactacagcggcggcaccaccatcaatgaaggtacgctggtc
gccgccagtacgacggcgctgggcaccggtctggtagacaataatgccacgctggtgctg
gacgcagacggtgaagtcagcgcggtgggcggcatcaccactcatagcggcgcgacgacc
caactggcgctcggcacctcgttggatctcggcgacagcgcgttaattcagcaagatggc
agtacgctgaacgttgagctgaatagtgactcagtgcaaccgctgattaccggcagcagc
gccacgcttggcggcgatttggtcgtcagcgacgccagcctgcaagcgcgcgcctccgac
gcggagttccagtcctttaaactgatggatatgaccagcgatatcagcggcgactttacc
agcctgacgatgaacctcactgacaagccggactatctgaccgtaaccgggacaatcaat
cctgaagatgcgtcagaatatctgcttaccgaagggctgagctggaatgcgaccgccacg
tcagcgacgccagcacacggcacgtttaccctgggcgcaggcgacagttttgaagtcacc
agcgtactgggcgataaaaccggcaacggcgactgggacggtaaatcgctgaccaaactg
ggcgcgggtaaactgacgctgagcggcgcgaacacctatagcggcgataccaacgtacag
gaaggcacgctatggctgtccggagacggctcgattggcgagatgggcagccagcaggcg
gtgaacgtcgcctccggggcgaccttcggcggcagcaatggtacgaccgttaacggtaag
gtgaccaacgaagggacgctggtcttcggcaacagcgaggaaacaggcgctatcttcacc
ctcaatggcgatctgatcaacatggggacaatgaccagtggtagcagctccagcacgcct
ggcaatacgctttatgtcgatggcaattacaccggcaacggcggctcgctttacctgaat
accgtcctgggcgacgatgattcggcaaccgataagttggtcattaccggcgatgcttcc
ggcaccaccgatctgtacatcaacggcatcggcgatggagcacagaccactaacggtatc
gaagtggtggatgttggcggcgtatcgaccagcgatgcgtttgagctaaaaaatgaggtt
aacgccggtctgtatacctaccgtctgtactggaatgaaagtgacaacgactggtatctg
gcgtcaaaagcacagtctgatgatgacgacagcggcggtgatgacacgccttcggatggc
ggtgacgatggcggtaatgtcacgcctccggacgacggcggcgatggcggtaatgtcacg
cctccggacgacggcggcgacggcggcgatgtcacgcctccggaccacggcggcgatgtc
gcaccgcagtaccgtgcggatatcggcgcgtacatgggcaaccagtggatggcgcgcaac
ctgcaaatgcagaccctctatgaccgcgagggcagccagtatcgtaatgccgatggcagc
gtatgggcgcgcttcaaagcgggtaaagcggaatccgaggctgtcagcggcaatatcgat
atggacagcaactactcccagttccagttaggcggcgacattctggcctggggtaacggc
cagcagagcgttaccgttggcgtcatggcgagctacatcaacgccgataccgacagcacc
ggtaaccgtggcgcagacggtagccagttcaccagtagcggcaacgtagacggctacaac
cttggcgtctatgccacctggtttgccgatgcccaaacgcatagcggcgcgtatgtcgac
agctggtaccaatatggtttctacaacaacagcgtagagagcggtgatgcgggatctgaa
tcttatgattcaaccgctaacgccgtctcgctggaaactggttatcgctacgatattgcg
cttagcaacggtaatactgtcagtctgacgccgcaggcgcaggttgtctggcagaattac
tcagcggatagcgtgaaggataactacggcacccggattgatggtcaggatggcgacagt
tggacaacgcgtctgggtctgcgtgttgacggcaagctgtacaaaggcagccgtacggtt
atccagccgtttgctgaagctaactggctgcacaccagcgatgatgtgtcggtatcgttt
gatgatgctacggtgaaacaggatcttccggctaaccgtgcggagctgaaagtgggtctg
caggcagatatcgataagcagtggagcgttcgcgctcaggttgccgggcagactggcagc
aatgactttggcgatctgaacggtagcctcaatctgcgctataactggtaa
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