Salmonella enterica subsp. enterica serovar Typhimurium U288: STU288_09135
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Entry
STU288_09135 CDS
T02639
Symbol
glyA
Name
(GenBank) serine hydroxymethyltransferase
KO
K00600
glycine hydroxymethyltransferase [EC:
2.1.2.1
]
Organism
setu
Salmonella enterica subsp. enterica serovar Typhimurium U288
Pathway
setu00260
Glycine, serine and threonine metabolism
setu00460
Cyanoamino acid metabolism
setu00630
Glyoxylate and dicarboxylate metabolism
setu00670
One carbon pool by folate
setu00680
Methane metabolism
setu01100
Metabolic pathways
setu01110
Biosynthesis of secondary metabolites
setu01120
Microbial metabolism in diverse environments
setu01200
Carbon metabolism
setu01230
Biosynthesis of amino acids
setu01240
Biosynthesis of cofactors
setu04981
Folate transport and metabolism
Brite
KEGG Orthology (KO) [BR:
setu00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00630 Glyoxylate and dicarboxylate metabolism
STU288_09135 (glyA)
09102 Energy metabolism
00680 Methane metabolism
STU288_09135 (glyA)
09105 Amino acid metabolism
00260 Glycine, serine and threonine metabolism
STU288_09135 (glyA)
09106 Metabolism of other amino acids
00460 Cyanoamino acid metabolism
STU288_09135 (glyA)
09108 Metabolism of cofactors and vitamins
00670 One carbon pool by folate
STU288_09135 (glyA)
09150 Organismal Systems
09154 Digestive system
04981 Folate transport and metabolism
STU288_09135 (glyA)
Enzymes [BR:
setu01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.2 Hydroxymethyl-, formyl- and related transferases
2.1.2.1 glycine hydroxymethyltransferase
STU288_09135 (glyA)
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Motif
Pfam:
SHMT
Aminotran_1_2
Beta_elim_lyase
OKR_DC_1
Aminotran_5
Motif
Other DBs
NCBI-ProteinID:
AGK09435
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Position
complement(1906411..1907664)
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AA seq
417 aa
AA seq
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MLKREMNIADYDAELWQAMEQEKVRQEEHIELIASENYTSPRVMQAQGSQLTNKYAEGYP
GKRYYGGCEYVDVVEQLAIDRAKELFGADYANVQPHSGSQANFAVYTALLQPGDTVLGMN
LAQGGHLTHGSPVNFSGKLYNIVPYGIDESGKIDYDEMAKLAKEHKPKMIIGGFSAYSGV
VDWAKMREIADSIGAYLFVDMAHVAGLIAAGVYPNPVPHAHVVTTTTHKTLAGPRGGLIL
AKGGDEELYKKLNSAVFPSAQGGPLMHVIAGKAVALKEAMEPEFKVYQQQVAKNAKAMVE
VFLNRGYKVVSGGTENHLFLLDLVDKNLTGKEADAALGRANITVNKNSVPNDPKSPFVTS
GIRIGSPAVTRRGFKEAEVKELAGWMCDVLDNINDEATIERVKAKVLDICARFPVYA
NT seq
1254 nt
NT seq
+upstream
nt +downstream
nt
atgttaaagcgtgaaatgaacattgccgattatgatgccgaattgtggcaggctatggag
caggaaaaagtacgtcaggaagagcacatcgaactgatcgcctccgaaaactacaccagc
ccgcgcgtgatgcaggcgcaggggtctcagctgaccaacaaatacgctgaaggttatccg
ggcaagcgctactacggcggttgcgaatacgttgatgtcgtagagcaactggctatcgac
cgcgcgaaagaactgttcggcgccgactacgctaacgtgcagccgcactccggttctcag
gctaacttcgctgtttacaccgcgctgctgcagccgggcgataccgttctgggtatgaac
ctggcgcagggcggccacctgactcacggctccccggttaacttctccggtaaactgtac
aacatcgtaccttacggtatcgatgagtccggtaaaattgactatgacgagatggcgaag
ctggccaaagagcacaagccgaagatgattatcggtggcttctctgcctactccggcgtg
gttgactgggcaaaaatgcgtgaaatcgctgacagcatcggcgcatacctgtttgtcgac
atggcgcacgtggcgggcctgattgccgcaggcgtttacccgaacccggttccgcacgct
cacgttgtcaccaccaccacccacaaaaccctggcgggtccgcgcggcggcctgatcctg
gcgaagggcggcgatgaagagctgtataaaaaactgaactccgccgtcttcccaagcgcg
cagggcggcccgctgatgcacgtgatcgccggtaaagcggtagcgctgaaagaagcgatg
gagccggagttcaaagtttaccagcagcaggtggcgaaaaacgccaaagcgatggtggaa
gtgttcctgaaccgcggctacaaagtggtgtctggcggcactgagaaccacctgttcctg
ctggacctggtggataaaaacctgaccggtaaagaagctgacgccgcgctgggccgtgct
aacatcaccgtgaacaaaaacagcgtgccgaacgatcctaagagcccgttcgtgacctcc
ggtatccgtattggttctccggcggttactcgtcgcggcttcaaagaagcggaagtgaaa
gagctggctggctggatgtgtgacgtgctggacaacatcaatgatgaagccaccattgaa
cgcgtgaaagcgaaagtgctggatatctgcgcacgcttcccggtttacgcataa
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