Salmonella enterica subsp. enterica serovar Typhimurium U288: STU288_10080
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Entry
STU288_10080 CDS
T02639
Name
(GenBank) DNA-binding transcriptional repressor DeoR
KO
K11534
DeoR family transcriptional regulator, deoxyribose operon repressor
Organism
setu
Salmonella enterica subsp. enterica serovar Typhimurium U288
Brite
KEGG Orthology (KO) [BR:
setu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
setu03000
]
STU288_10080
Transcription factors [BR:
setu03000
]
Prokaryotic type
Helix-turn-helix
DeoR family
STU288_10080
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Gene cluster
GFIT
Motif
Pfam:
DeoRC
HTH_DeoR
HTH_Mga
HTH_11
HTH_23
Sigma70_r4
HTH_31
HTH_17
Motif
Other DBs
NCBI-ProteinID:
AGK09624
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Position
2110374..2111132
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AA seq
252 aa
AA seq
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METRRDERIGQLLQALKRSDKLHLKEAATLLGVSEMTIRRDLNHKSAPVVLLGGYIVLEP
RSASHYLLSDQKSRLVEEKRRAAQLAAGLVQAHQTVFIDCGTTTPWIIEAIDNDLPFTAV
CYSLNTFLALQDKPHCRAILSGGEFHASNAIFKPLDFHETLNNICPDIAFYSAAGVHTSK
GATCFNLEELPVKHWAMTMAQCHVLVVDHSKFGKVRPARMGELSRFDTIISDRRPDEAFV
AYAKAQQITLMY
NT seq
759 nt
NT seq
+upstream
nt +downstream
nt
atggaaacgcgacgcgacgagcgtattggtcaattgctgcaggccttaaaacgcagcgat
aaacttcatcttaaagaagccgcgaccctgttgggcgtctctgaaatgaccattcgtcgc
gacctgaaccataaaagcgcgcctgtcgtgttgctaggcggctatatcgtactggagccc
cgcagcgccagtcattatctgttaagcgatcaaaaatctcgtctggtggaagaaaaacgc
cgagccgctcagctggctgcgggcctggtacaagcgcatcagacggtatttattgactgc
ggcaccaccacgccgtggatcattgaagccattgataatgaccttccctttacggcggtg
tgctattcacttaataccttcctggcgctgcaggacaaaccccattgccgcgccatcctc
agcggcggggagtttcacgccagcaacgccattttcaaaccgcttgatttccatgaaacg
ttaaacaatatttgtccggatatcgcgttttattccgccgctggcgttcataccagtaaa
ggcgctacctgctttaatctggaagagctgccggtaaaacattgggcaatgacaatggca
cagtgccatgtactggtggtggatcacagtaaattcggcaaggtacgtccggcgcggatg
ggggaattatcacgctttgatacgattatcagcgaccgccgtcccgatgaggcctttgtg
gcctacgctaaagcgcaacaaattactctgatgtattaa
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