Salmonella enterica subsp. enterica serovar Typhimurium U288: STU288_12125
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Entry
STU288_12125 CDS
T02639
Name
(GenBank) transcriptional regulator HU subunit beta
KO
K03530
DNA-binding protein HU-beta
Organism
setu
Salmonella enterica subsp. enterica serovar Typhimurium U288
Brite
KEGG Orthology (KO) [BR:
setu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
setu03032
]
STU288_12125
03036 Chromosome and associated proteins [BR:
setu03036
]
STU288_12125
03400 DNA repair and recombination proteins [BR:
setu03400
]
STU288_12125
DNA replication proteins [BR:
setu03032
]
Prokaryotic type
DNA Replication Initiation Factors
Initiation factors (bacterial)
STU288_12125
Chromosome and associated proteins [BR:
setu03036
]
Prokaryotic type
Nucleoid associated proteins
HU (heat unstable protein)
STU288_12125
DNA repair and recombination proteins [BR:
setu03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Supressor
STU288_12125
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Bac_DNA_binding
HU-HIG
HU-CCDC81_bac_2
HU-CCDC81_euk_2
HU-CCDC81_euk_1
Motif
Other DBs
NCBI-ProteinID:
AGK10031
LinkDB
All DBs
Position
complement(2539340..2539612)
Genome browser
AA seq
90 aa
AA seq
DB search
MNKSQLIEKIAAGADISKAAAGRALDAIIASVTESLKEGDDVALVGFGTFAVKERAARTG
RNPQTGKEITIAAAKVPSFRAGKALKDAVN
NT seq
273 nt
NT seq
+upstream
nt +downstream
nt
gtgaataaatctcaactgatcgaaaaaattgctgcaggggctgatatctctaaggctgcg
gctggacgtgcgttagatgcgattattgcttctgttaccgaatctctgaaagaaggggat
gacgttgcactggtaggctttggtacttttgctgttaaagagcgtgctgcccgtactggt
cgcaacccgcaaacaggtaaagagatcaccatcgccgctgccaaagtgccgagtttccgt
gcaggtaaagcgctgaaagacgcggtaaactaa
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