Salmonella enterica subsp. enterica serovar Typhimurium U288: STU288_12265
Help
Entry
STU288_12265 CDS
T02639
Name
(GenBank) geranyltranstransferase
KO
K00795
farnesyl diphosphate synthase [EC:
2.5.1.1
2.5.1.10
]
Organism
setu
Salmonella enterica subsp. enterica serovar Typhimurium U288
Pathway
setu00900
Terpenoid backbone biosynthesis
setu01100
Metabolic pathways
setu01110
Biosynthesis of secondary metabolites
Module
setu_M00364
C10-C20 isoprenoid biosynthesis, bacteria
Brite
KEGG Orthology (KO) [BR:
setu00001
]
09100 Metabolism
09109 Metabolism of terpenoids and polyketides
00900 Terpenoid backbone biosynthesis
STU288_12265
09180 Brite Hierarchies
09181 Protein families: metabolism
01006 Prenyltransferases [BR:
setu01006
]
STU288_12265
Enzymes [BR:
setu01000
]
2. Transferases
2.5 Transferring alkyl or aryl groups, other than methyl groups
2.5.1 Transferring alkyl or aryl groups, other than methyl groups (only sub-subclass identified to date)
2.5.1.1 dimethylallyltranstransferase
STU288_12265
2.5.1.10 (2E,6E)-farnesyl diphosphate synthase
STU288_12265
Prenyltransferases [BR:
setu01006
]
Terpene biosynthesis
Prenyl diphosphate synthase
STU288_12265
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
polyprenyl_synt
UbiA
Arm-DNA-bind_3
Motif
Other DBs
NCBI-ProteinID:
AGK10059
LinkDB
All DBs
Position
2570302..2571201
Genome browser
AA seq
299 aa
AA seq
DB search
MDFTQQLQACVTQANQALSRFIAPLPFQNTPVVEAMQYGALLGGKRLRPFLVYATGQMFG
VSTATLDAPAAAVECIHAYSLIHDDLPAMDDDDLRRGLPTCHIKFGEANAILAGDALQTL
AFAIISDAPMPEVADRDRIAMIAELANASGIAGMCGGQALDLAAEGQRITLDALERIHRH
KTGALIRAAVRLGALSAGDKGRNTLPILDRYAESIGLAFQVQDDILDVVGDTATLGKRQG
ADQQLGKSTYPALLGLEQARNKARDLIEDARQSLHQLAAQSLDTSALEALANYIIQRDK
NT seq
900 nt
NT seq
+upstream
nt +downstream
nt
atggactttacgcagcagctacaggcttgcgtaacgcaagcgaatcaggcgctgagccgt
tttatcgcgccactgccctttcagaacactcccgtggtcgaagccatgcagtatggcgca
ttattaggcggtaaacgcctgcggccatttctggtttacgccaccggtcaaatgtttggc
gtcagtacggcaacgctggatgcgccagctgcggcggtcgaatgcattcatgcctattcg
ctgatccatgacgacctgccagcaatggacgatgacgatttgcgtcgcggcctgccgact
tgccatattaaatttggcgaagccaacgcaatcctggcgggagacgcgttgcagacgctg
gcgtttgccattatcagcgacgcgccgatgccggaagtcgccgatcgcgatcgtatcgcg
atgatcgccgaactggcaaacgccagcggtatcgccggtatgtgcggcggtcaggcattg
gatctggcggcagaaggccagcggatcactctggacgcgctggaacgcattcatcgccat
aagaccggcgcgctcattcgcgccgccgttagacttggcgcattgagcgcgggcgataaa
ggacggaatactctgccgatacttgaccgctatgcagagagtatcggccttgccttccag
gttcaggatgacattctggatgtggtgggcgatactgcaacgttaggtaaacgtcagggc
gcagaccagcagcttggcaaaagtacctaccctgcacttctgggtcttgagcaagcccgg
aataaagcccgggacctgatagaggacgcccgtcagtcgttacatcagctggccgcgcaa
tcactggacacctcggcactggaagcgctagcgaactacataatccagcgtgataaataa
DBGET
integrated database retrieval system
