KEGG   Salmonella enterica subsp. enterica serovar Typhimurium U288: STU288_13385
Entry
STU288_13385      CDS       T02639                                 
Name
(GenBank) SPI-6 associated protein
  KO
K11907  type VI secretion system protein VasG
Organism
setu  Salmonella enterica subsp. enterica serovar Typhimurium U288
Pathway
setu03070  Bacterial secretion system
Brite
KEGG Orthology (KO) [BR:setu00001]
 09130 Environmental Information Processing
  09131 Membrane transport
   03070 Bacterial secretion system
    STU288_13385
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   02044 Secretion system [BR:setu02044]
    STU288_13385
Secretion system [BR:setu02044]
 Type VI secretion system
  Imp/Vas secretion system core components
   STU288_13385
SSDB
Motif
Pfam: AAA_2 AAA_lid_9 AAA ClpB_D2-small AAA_5 AAA_16 AAA_22 Zeta_toxin AAA_25 Sigma54_activat AAA_7 NACHT nSTAND3 IstB_IS21 TniB ATPase_2 AAA_24 P33MONOX Hpr_kinase_C T2SSE AAA_30 AAA_6 NBD_SMAX1
Other DBs
NCBI-ProteinID: AGK10279
LinkDB
Position
complement(2775267..2777906)
AA seq 879 aa
METPVSRSALYGKLAGPLFRSLESATAFCKLRSNPWVELTHWLHQLTQQPDNDILHVLRH
YQIPLSDVEKALLRQLDMLPAGASAISDFSHHIDLSVEKAWMLASVRYGDNKIRSGWLLL
ALLTTPELRRVLSSICAPLATLPVDELTEILPSLIETSPEAQERPYDGSGLASAIPGESS
QAIPNGGQDGKSALAKYCQDMTAQARDGKIDPVTGREHEIRTMTDILLRRRQNNPLLTGE
AGVGKTAVVEGFALAIAQGEVPPALREVRLLALDVGALLAGASMKGEFESRLKGLLEEAG
RSPQPVILFVDEVHTLVGAGGASGTGDAANLLKPALARGTLRTIGATTWSEYKRHIEKDP
ALTRRFQVLQIAEPEEIPAMEMVRGLVDTLEKHHNVLILDEAVRAAVQLSHRYIPARQLP
DKAISLLDTAAARVALTLHTPPASVQFLRQQLKAAEMERSLLQKQEKMGIQSDERRDALM
ARIFSLNNELTASESRWQRELELVHTLQELRLAESDADDKTTLQQAETALREWQGDAPVV
FPEVSAAVVAAIVADWTGIPAGRMVKDEASQVLELPARLAQRVTGQDGALAQIGERIQTA
RAGLGDPRKPVGVFMLAGPSGVGKTETALALAEAIYGGEQNLVTINMSEFQEAHTVSTLK
GAPPGYVGYGEGGVLTEAVRRHPWSVVLLDEIEKAHHDVHELFYQVFDKGGMEDGEGTHV
DFKNTTLLLTTNVGSDLISQMCEDPALMPDATGLKEALMPELRKHFPAAFLGRVTVIPYL
PLDETSRGVIARLHLDRLVARMSEQHGVTLTYSEELVAHIVACCPMHETGARLLIGYIEQ
HILPRLSRYWLQAMTEKAAIRQIDIGVNGDEQIVFEIVC
NT seq 2640 nt   +upstreamnt  +downstreamnt
atggaaactcctgtttcacgcagtgcgttgtatggaaaactggccggcccactattccgg
tcgctggaatcggcaacggcattttgcaaactacgctctaatccctgggttgagctgact
cactggctgcaccagttaacacagcagcccgataacgatattctccacgttcttcggcat
taccagatccctctttctgatgtggagaaagcgttactccggcaactggatatgctgccc
gccggggccagcgccattagtgatttttctcaccatatcgatctcagcgttgaaaaggcc
tggatgctggcgagcgtccgttacggcgataacaaaattcgcagcggctggttgctgctg
gccttgttgaccacgccagaactgcgtcgggtactgagcagtatctgcgcgccgctggcc
acgcttccggttgatgaactgacggaaatactgccctcgttgatcgaaacatcgccggaa
gcgcaggagcgcccttacgacggctccggcctggcatcagccattcccggtgaaagcagt
caggcgattcccaacggcgggcaggacggtaaatccgcgctggcaaaatactgtcaggac
atgacggcacaggcgcgcgacggcaaaatcgacccggtgacggggcgtgagcatgaaatc
cgcaccatgacggatattctgctgcgccgtcgccagaataatccactactgactggtgag
gcgggcgtcgggaaaacggcggtcgtcgaaggttttgccctcgcgattgcgcagggggaa
gtgccgcccgcgctgcgggaagtacggctactggcgctggacgttggcgctctgttggcc
ggagccagcatgaaaggcgagtttgaatcgcgtctgaaagggttactggaagaggccggg
cgctcgccgcagccggttattctgtttgtcgatgaagttcacactctggtgggcgcgggc
ggcgcatccggcacgggcgatgccgctaacctgctgaaaccggcgctggcgcgcggcacc
ctgcggactatcggcgccaccacctggagcgaatacaagcgccatattgagaaagatccg
gcgctgacccgtcgttttcaggtgttgcagattgccgaaccggaagagatccccgcaatg
gaaatggtgcgtggtctggtggatacgctggaaaaacaccataacgtactgattctggat
gaggcggtacgtgcggcggtacagctttctcaccgctacattcccgcccggcagttgccg
gataaggccatcagcctgctggataccgccgcggcccgcgtggcgctgacgctgcacacg
ccgcctgccagcgtacagttcctgcgccagcagctaaaagcggcggaaatggaacggtcg
ctgttgcagaagcaggaaaaaatggggattcagtcagatgagcggcgcgatgcgctgatg
gcgcgaattttctcgctcaacaatgaactgactgcatccgaatcccgctggcagcgggag
ctggaactggtacatacgttgcaggaactgcgtctcgcagagtctgatgctgatgacaaa
accacgctgcaacaggccgaaacggcgctaagggagtggcagggcgacgcgccggtggtg
ttcccggaagtcagcgcggcggttgtcgcggcgattgtcgccgactggaccggtattcct
gctgggcgcatggtgaaagatgaggccagccaggtgctggaactgcctgcccgactggcg
caacgcgttaccgggcaagacggcgcgctggcgcagattggtgaacgtattcagaccgcc
agggcgggactgggcgatccacgcaaaccggtgggcgtgtttatgctggccgggccgtcc
ggtgtcggtaaaaccgaaaccgcgctggcgctggcggaggctatctacggcggcgagcag
aacctggtaaccatcaatatgagcgagttccaggaggctcacaccgtttccacgctgaaa
ggcgcgccgcccggctatgtgggctatggcgagggtggtgtgctgacggaagcggtgcgt
cgccacccctggagcgtagtgctgctcgacgagatcgaaaaagcgcaccatgacgtccac
gaactcttctatcaggtgtttgacaagggtgggatggaggacggcgagggtacacatgtc
gatttcaaaaacaccacgctattactcaccaccaacgtgggttccgacctcatcagccag
atgtgtgaagatccggccttaatgcccgatgctacggggcttaaagaggcgctaatgccg
gaattgcgcaagcatttcccggcggcatttctgggccgcgtgacggtgatcccttacctg
ccgctggacgaaacgtcgcgtggcgtgattgcccgtctgcaccttgaccggctggtggcg
cggatgagtgaacagcacggcgtgacgctgacgtatagcgaggaactggtcgcacatatt
gtggcgtgctgtccaatgcatgaaacgggcgcgcggttgctgattggctacatcgaacag
cacattctgccacgactgtcgcgctactggttgcaggccatgacggaaaaagccgcgatc
aggcagattgatatcggcgttaatggtgatgagcagattgtttttgagatcgtttgctga

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