Salmonella enterica subsp. enterica serovar Typhimurium U288: STU288_19895
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Entry
STU288_19895 CDS
T02639
Symbol
dapF
Name
(GenBank) diaminopimelate epimerase
KO
K01778
diaminopimelate epimerase [EC:
5.1.1.7
]
Organism
setu
Salmonella enterica subsp. enterica serovar Typhimurium U288
Pathway
setu00300
Lysine biosynthesis
setu00470
D-Amino acid metabolism
setu01100
Metabolic pathways
setu01110
Biosynthesis of secondary metabolites
setu01120
Microbial metabolism in diverse environments
setu01230
Biosynthesis of amino acids
Module
setu_M00016
Lysine biosynthesis, succinyl-DAP pathway, aspartate => lysine
Brite
KEGG Orthology (KO) [BR:
setu00001
]
09100 Metabolism
09105 Amino acid metabolism
00300 Lysine biosynthesis
STU288_19895 (dapF)
09106 Metabolism of other amino acids
00470 D-Amino acid metabolism
STU288_19895 (dapF)
Enzymes [BR:
setu01000
]
5. Isomerases
5.1 Racemases and epimerases
5.1.1 Acting on amino acids and derivatives
5.1.1.7 diaminopimelate epimerase
STU288_19895 (dapF)
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Motif
Pfam:
DAP_epimerase
PhzC-PhzF
Motif
Other DBs
NCBI-ProteinID:
AGK11573
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Position
4147159..4147983
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AA seq
274 aa
AA seq
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MQFSKMHGLGNDFMVVDAVTQNVFFSPELIRRLSDRHLGVGFDQLLVVEPPYDPELDFHY
RIFNADGSEVSQCGNGARCFARFVRLKGLTNKRDIRVSTANGRMVLSVTEDELVRVNMGE
PNFEPAQVPFRANKAEKTYIMRAAEQTILCGVVSMGNPHCVIQVDNVDTAAVETLGPVLE
SHERFPERANIGFMQVVRREHIRLRVYERGAGETRACGSGACAAVAVGIQQGLLAEEVRV
ELPGGRLDIAWKGPGHPLYMTGPAAHIYDGFIHL
NT seq
825 nt
NT seq
+upstream
nt +downstream
nt
atgcaattctctaaaatgcatggccttggcaacgattttatggtcgtcgacgcggtaacg
cagaatgtctttttttcgccggaactgattcgtcggctatccgacagacacctgggcgta
gggttcgatcagctgctggtggttgagccgccctatgatcctgagttggactttcattac
cgcatcttcaacgccgacggcagtgaagtctcgcagtgcggcaatggcgcgcgctgtttc
gcgcgatttgttcgcctgaaagggctaaccaataaacgcgacattcgggtcagtaccgcg
aatggccggatggtactgagcgtcacggaagatgaactggtgcgggtgaatatgggggaa
ccaaactttgaacccgcgcaggtgccttttcgcgccaacaaagcggaaaagacgtatatt
atgcgagcggcggaacagaccatactgtgcggcgtggtttcaatgggcaatccgcactgt
gtcattcaggttgataacgtcgacacggcggccgttgaaacactggggccggttctggaa
agccatgagcgttttccggaacgcgccaacattggttttatgcaggttgtaagacgtgag
catatccggctgcgagtctatgaacgcggcgcaggggagacccgcgcgtgcggcagcggc
gcgtgcgctgccgttgccgtggggattcagcaggggctgctggctgaagaagtacgcgtg
gaattaccgggcggtcggctggatatcgcctggaaaggtccgggtcatccgttatacatg
actggtccggcggcacatatctacgacggatttatccatttatga
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