Salmonella enterica subsp. enterica serovar Typhimurium U288: STU288_20620
Help
Entry
STU288_20620 CDS
T02639
Name
(GenBank) DNA-binding transcriptional regulator CytR
KO
K05499
LacI family transcriptional regulator, repressor for deo operon, udp, cdd, tsx, nupC, and nupG
Organism
setu
Salmonella enterica subsp. enterica serovar Typhimurium U288
Brite
KEGG Orthology (KO) [BR:
setu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
setu03000
]
STU288_20620
Transcription factors [BR:
setu03000
]
Prokaryotic type
Helix-turn-helix
LacI family
STU288_20620
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Peripla_BP_3
Peripla_BP_1
LacI
Peripla_BP_4
HTH_Tnp_ISL3
Motif
Other DBs
NCBI-ProteinID:
AGK11714
LinkDB
All DBs
Position
complement(4297079..4298104)
Genome browser
AA seq
341 aa
AA seq
DB search
MKSNKQVTAATMKDVALKAKVSTATVSRALMNPDKVSQSTRSRVEQAALEVGYFPQSMGR
NVKRNESRTILVIVPDICDPFFSEIIRGIEVTAAEQGYLVLIGDCAHQNQKEKTFLNLII
TKQIDGMVLLSSRLPFDASVEEQRNLPPMVMSNEFAPELELPTVHIDNLTAAFNAMNYLL
DLGHKRIGCIAGPEDMPLCHYRLQGYVQALRRSGIVVDPHYIARGDFTFEAGANALKQLL
EQPLPPTAVFCHSDVMALGALSWAKRQGLKVPDDLSIIGFDNIALAEFCDPPLTTVAQPR
FDIGREAMLLLLDQMQGQNVSSGSRLMDCELIIRGSTRALP
NT seq
1026 nt
NT seq
+upstream
nt +downstream
nt
gtgaaatcgaacaagcaggttactgccgctacgatgaaggatgttgcgttgaaggcgaaa
gtctctacggcaaccgtatcccgcgcgttaatgaaccccgataaagtctcccagtcgacc
cgtagccgggttgaacaggccgcgcttgaagtgggttatttcccgcagtcgatggggcga
aatgtaaaacgcaatgaatcccgtacgattttggtgattgtcccggatatttgcgatccc
ttcttcagtgaaattatccgcggtatcgaagtgaccgcggcagaacaggggtatctggtg
ctgattggcgattgcgcccatcaaaaccagaaagaaaaaacctttcttaatctcatcatc
accaaacagatcgacggcatggtacttctcagttcccgactgccctttgacgccagcgtt
gaggagcagcgcaatttgcctccgatggtgatgtcgaatgagttcgcgccggagcttgaa
ctgccgacggtacatattgataacctcaccgccgcgttcaatgccatgaactacctgttg
gatttgggccacaagcgaattggttgtattgcggggccggaagatatgccgctctgtcac
tatcgcttacaaggttacgtacaggcattaagacgcagtggcattgtggtcgatccgcat
tacatcgcccgtggcgactttacctttgaagccggggcaaacgcattaaagcagttgctt
gagcaaccgttgccgcctaccgccgtcttttgtcatagcgacgtaatggcgctgggcgcc
ctctcctgggccaagcgccagggtctgaaagtgcctgacgatctgtcgattatcggcttt
gacaatatcgcgctggccgagttttgcgaccctccgttgacaaccgtggcgcagccgcgt
tttgacattggtcgcgaggcgatgctgttgttgctcgatcagatgcaggggcaaaatgtg
agcagcggctcgcgtttaatggattgcgagctgattattcgcggttctacgcgcgcttta
ccctaa
DBGET
integrated database retrieval system
