KEGG   Salmonella enterica subsp. enterica serovar Typhimurium U288: STU288_22625
Entry
STU288_22625      CDS       T02639                                 
Name
(GenBank) cell density-dependent motility repressor
  KO
K21645  LysR family transcriptional regulator, hypochlorite-specific transcription factor HypT
Organism
setu  Salmonella enterica subsp. enterica serovar Typhimurium U288
Brite
KEGG Orthology (KO) [BR:setu00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03000 Transcription factors [BR:setu03000]
    STU288_22625
Transcription factors [BR:setu03000]
 Prokaryotic type
  Helix-turn-helix
   LysR family
    STU288_22625
SSDB
Motif
Pfam: LysR_substrate HTH_1
Other DBs
NCBI-ProteinID: AGK12113
LinkDB
Position
complement(4759946..4760854)
AA seq 302 aa
MDVTGAGLHNIETKWLYDFLTLEKCRNFSQAAIIRNVSQPAFSRRIRALEHAVGVELFNR
QVSPLQLSEQGKIFHSQVRHLLQQLESNLTELRGGSDYTLRKIKIAAAHSLSLGLLPTIV
KQMPTQFTYAVEAIDVDQAVDMLREGQSDFIFSYHDENLQQAPFDNIRLFESRLFPVCAN
NGRGEPRYTLEQPHFPLLNYSQNSYMGRLINRTLTRHAELSFSTFFVSSMSELLKQVAMD
GCGIAWLPEYAIRQEITDGRLIVLDADELVIPIQAYAYRMNTRMSQVAETFWRDLRGLQA
AL
NT seq 909 nt   +upstreamnt  +downstreamnt
atggatgtaactggagcaggtttgcacaatattgagacaaaatggctatatgattttctg
acgctggaaaagtgccgcaatttctctcaggccgccattatccgcaacgtatcgcaaccc
gcttttagccggcggattcgcgccctggaacatgccgtgggcgttgaactgtttaaccga
caggtctcgccgctacagctttccgaacagggtaaaatctttcactcccaggttcgccac
ctgttacagcagctggaaagtaatctgaccgaactgcgcggcggcagcgattatacgctg
cgtaaaatcaagattgccgccgcccactcgctctccctcggcctgttgccgaccatcgtt
aagcagatgcctacgcagtttacctacgccgttgaggcgatagatgtcgaccaggcggtg
gatatgttacgtgaggggcaaagcgattttatcttttcttatcacgatgaaaacctgcaa
caagcgccgtttgataatatccgcctgtttgagtcgagactgtttccggtttgcgccaac
aatggccggggcgagccgcgctatacgcttgagcagccgcactttcccctgcttaattac
agtcagaactcctatatgggccgattgataaatcgtaccctgactcgccatgctgaactg
agtttcagtacatttttcgtctcttcgatgagtgaattgttaaaacaggttgcgatggac
ggctgcggaatcgcctggttgcccgagtatgctatccgtcaggagattaccgacgggcgc
ctgatagtgcttgatgccgacgaactggttatcccgatccaggcttatgcttatcgcatg
aatacccgcatgagtcaggtagccgaaacattttggcgcgacctgcgtgggcttcaggcc
gcgctgtaa

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