Streptococcus equi subsp. equi 4047: SEQ_0099
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Entry
SEQ_0099 CDS
T00877
Name
(GenBank) DNA-directed RNA polymerase beta' chain
KO
K03046
DNA-directed RNA polymerase subunit beta' [EC:
2.7.7.6
]
Organism
seu
Streptococcus equi subsp. equi 4047
Pathway
seu03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
seu00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
SEQ_0099
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
seu03021
]
SEQ_0099
03400 DNA repair and recombination proteins [BR:
seu03400
]
SEQ_0099
Enzymes [BR:
seu01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
SEQ_0099
Transcription machinery [BR:
seu03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
SEQ_0099
DNA repair and recombination proteins [BR:
seu03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
SEQ_0099
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_Rpb1_1
RNA_pol_Rpb1_5
RNA_pol_Rpb1_3
RNA_pol_Rpb1_2
RNA_pol_Rpb1_4
Peptidase_M23
CM_2
Motif
Other DBs
NCBI-ProteinID:
CAW92042
UniProt:
C0M7R5
LinkDB
All DBs
Position
108917..112552
Genome browser
AA seq
1211 aa
AA seq
DB search
MVDVNRFKSMQITLASPSKVRSWSYGEVKKPETINYRTLKPEREGLFDEVIFGPTKDWEC
ACGKYKRIRYKGIVCDRCGVEVTRAKVRRERMGHIELKAPVSHIWYFKGIPSRMGLTLDM
SPRALEEVIYFAAYVVIDPKDTPLEPKSLLTEREYREKIQEYGHGSFIAKMGAEAIQDLL
KRVDLVTEIAELKEELKTATGQKRIKAVRRLDVLDAFHKSGNKPEWMILNILPVIPPDLR
PMVQLDGGRFAASDLNDLYRRVINRNNRLARLLELNAPGIIVQNEKRMLQEAVDALIDNG
RRGRPITGPGSRPLKSLSHMLKGKQGRFRQNLLGKRVDFSGRSVIAVGPTLKMYQCGVPR
EMAIELFKPFVIREIVAREFAGNVKAAKRMVERGDERIWDILEEVIKEHPVLLNRAPTLH
RLGIQAFEPVLIDGKALRLHPLVCEAYNADFDGDQMAIHVPLSEEAQAEARLLMLAAEHI
LNPKDGKPVVTPSQDMVLGNYYLTMEDAGREGEGMVFKDKDEAVMAYRNGYVHLHSRVGI
AVDSMPSKLWKDSQRHKIMVTTVGKILFNDIMPEDLPYLQEPNNANLTEGTPDKYFLKPG
QNIQEVIDSLPINVPFKKKNLGNIIAETFKRFRTTETSAFLDRLKDLGYYHSTLAGLTVG
IADIPVIDNKAEIIEAAHHRVEEINKAFRRGLMTDDDRYVAVTTTWREAKEALEKRLIET
QDPKNPIVMMMDSGARGNISNFSQLAGMRGLMAAPNGRIMELPILSNFREGLSVLEMFFS
THGARKGMTDTALKTADSGYLTRRLVDVAQDVIIREDDCGTDRGLLIRAITDGKEVTETL
EERLQGRYTRKSVKHPETGEVLIGADQLITEDMARKIVDAGVEEVTIRSVFTCATRHGVC
RHCYGINLATGDAVEVGEAVGTIAAQSIGEPGTQLTMRTFHTGGVASNTDITQGLPRIQE
IFEARNPKGEAVITEVKGTVIEIEEDASTRTKKVYVQGKTGMGEYVVPFTARMKVEVGDE
VNRGAALTEGSIQPKHLLEVRDTLSVETYLLAEVQKVYRSQGVEIGDKHVEVMVRQMLRK
VRVMDPGDTDLLPGTLMDIADFTDANKEIVISGGIPATSRPVLMGITKASLETNSFLSAA
SFQETTRVLTDAAIRGKKDHLLGLKENVIIGKIIPAGTGMVRYRNIEPQAINEVEVIEEA
EATEEPAIIKE
NT seq
3636 nt
NT seq
+upstream
nt +downstream
nt
gtggttgacgtaaatcgttttaaaagtatgcaaatcacattagcttcaccaagtaaggtc
cgttcatggtcctatggtgaagttaaaaaacctgaaacaatcaactaccgtacattaaaa
ccagaacgtgagggtctttttgacgaagtcatttttggaccaaccaaggattgggagtgt
gcgtgtggcaaatataaacgtattcgctataagggcattgtctgtgaccgttgtggggtc
gaggtaacgcgtgcaaaggttcgtcgtgaacgcatgggacacattgagctgaaggcacct
gtctcacatatctggtattttaagggaatcccatctcgtatgggcttgactcttgatatg
agtcctcgtgctcttgaggaggtaatctattttgcggcttatgtggttattgatccaaag
gacacaccgcttgagccaaaatcactattgacagagcgtgaatatcgtgaaaaaatccaa
gaatatggacatggctcattcattgctaaaatgggggcagaggctattcaagacctccta
aagcgtgttgatttggtcacagaaattgctgagctaaaggaagaattaaaaacagcaaca
ggccaaaagcgtatcaaggctgttcgtcggttagatgtgcttgatgcctttcataaatca
ggcaataagccagaatggatgatcctgaacatcttgccggtcattccaccagatcttcgt
cctatggtgcaattggacggtggccgctttgcagcctcagacttgaatgacctttaccgt
cgtgtcattaaccgtaataatcgtttagcacgtttgttggagcttaatgcgcctggtatc
attgtgcaaaatgaaaagcgtatgctgcaagaggcggttgatgctttgattgataatggt
cgtcgtggtcgtcctattacaggacctggtagtcgtccgcttaaatccttgagccacatg
cttaaaggaaaacaagggcgttttcgtcaaaacctgcttgggaagcgtgttgacttctca
ggtcgttcagttattgctgtgggtccaacgctaaaaatgtaccaatgtggtgtaccacgt
gagatggctattgagcttttcaagccatttgtgatacgtgagattgttgcccgcgaattt
gccggcaacgtcaaagcagctaagcgtatggttgagcgtggcgatgagcgtatctgggat
attctagaagaggttatcaaggagcatccagtcctgcttaaccgcgcacctacccttcac
agattagggattcaggcctttgagccggtgcttattgatggtaaggctcttcgtcttcac
ccgcttgtgtgtgaggcctacaatgccgactttgacggagaccaaatggctattcacgtg
ccgctttcagaggaagcacaggcagaggctcgtttgttgatgcttgctgctgagcatatt
cttaaccctaaggacggtaagccagttgtaacaccttctcaggatatggtgctaggaaac
tactacctaacaatggaagatgctggtcgtgaaggcgaaggtatggtctttaaggacaag
gacgaagcggtaatggcttaccgtaatggctatgttcaccttcatagtcgtgttggtatt
gctgttgacagtatgccaagcaagctttggaaggatagtcaaagacacaaaatcatggtg
acaacggtcggtaagatcttgtttaatgacatcatgccagaggaccttccttacctccaa
gagccaaataatgctaacttgacagagggcactccagataaatatttcttgaagccaggt
cagaatattcaggaggttattgatagcttaccgatcaatgtgcccttcaagaagaaaaat
cttggtaacatcattgcggaaaccttcaagcgtttccgtacaacagaaacatcggccttt
cttgaccgcttgaaggaccttggctactatcattcaacccttgcgggcttgacggttggg
atcgctgatattccggttattgacaacaaggctgagatcatcgaggctgctcaccatcgt
gttgaggaaattaataaggccttccgtcgaggcttgatgactgatgatgatcgctatgtt
gcagtcacaacaacatggcgcgaggcaaaagaagcccttgagaagcgtctgattgaaaca
caggatcctaagaacccaatcgttatgatgatggactcaggagcgcgtggtaacatctct
aacttctcgcagcttgccggtatgcgtggcttgatggctgctcctaatggccgtattatg
gagcttcctatcctgtctaacttccgcgaaggcttgtctgttttggaaatgttcttctca
actcatggtgctcgtaagggtatgactgatacggctcttaagacagctgactcaggctat
ctgacacgtcgtttagttgatgttgcgcaagatgtcatcattcgtgaggacgattgtggt
acagaccgaggccttcttattcgagctatcacagatggcaaggaagtcactgaaacactt
gaggagcgcttgcagggtcgatacactcgtaaatcagtcaagcaccctgaaactggtgag
gtattgattggtgctgaccaattaatcactgaggacatggctcgcaagattgttgatgct
ggtgttgaagaggttaccattcgctcagtatttacctgtgctactcgtcatggagtgtgt
cgtcactgttacggtatcaacctagcgacaggtgatgcggttgaggttggtgaggctgtt
ggtactatcgctgcccaatctattggtgagcctggtactcagctgaccatgcgtaccttc
cacacaggaggggttgcctctaataccgatatcacacagggtcttcctcgtatccaagaa
atctttgaagcgcgcaaccctaaaggggaagcagttatcacagaggttaaggggactgtt
attgagattgaagaggacgcatcaactcgtactaagaaggtctacgttcaaggtaaaaca
ggcatgggtgaatatgttgtgccatttacagcgcgtatgaaggttgaggttggtgatgag
gtcaatcgtggagctgcccttacagaagggtcaatccagcctaagcacctccttgaggtt
cgtgataccttgtcagttgagacctacttgcttgctgaggttcaaaaggtttaccgcagc
caaggggtagaaatcggagacaagcacgttgaggttatggttcgtcaaatgcttcgcaag
gtacgtgtcatggatccaggtgatacagatcttctgccaggaaccttaatggatattgca
gactttacagatgccaataaggagattgttatctctggaggtattcctgcgacctctcgt
ccagtgcttatgggaatcacaaaagcctcacttgagactaactcattcctatcagcagct
tccttccaggaaaccactcgcgtgctgacagacgctgctatccgaggcaaaaaagaccat
ctattggggcttaaggaaaatgttatcattggtaagatcattccagcaggtactggtatg
gttcgttaccgtaacattgaaccgcaagctatcaatgaggttgaggttatcgaagaagct
gaagctacagaagagccagcaattattaaggaataa
DBGET
integrated database retrieval system
