Streptococcus equi subsp. equi 4047: SEQ_0357
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Entry
SEQ_0357 CDS
T00877
Name
(GenBank) metallo-beta-lactamase superfamily protein
KO
K12574
ribonuclease J [EC:3.1.-.-]
Organism
seu
Streptococcus equi subsp. equi 4047
Pathway
seu03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
seu00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
SEQ_0357
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
seu03019
]
SEQ_0357
Messenger RNA biogenesis [BR:
seu03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
SEQ_0357
BRITE hierarchy
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Gene cluster
GFIT
Motif
Pfam:
RNase_J_b_CASP
RNase_J_C
Lactamase_B
RMMBL
Lactamase_B_2
Anti-Pycsar_Apyc1
SIS_2
Motif
Other DBs
NCBI-ProteinID:
CAW92483
UniProt:
C0M9J1
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All DBs
Position
complement(339794..341476)
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AA seq
560 aa
AA seq
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MTNISLRPNEVGVYAIGGLGEIGKNTYGIEYQDEIIIVDAGIKFPEDDLLGIDYVIPDYS
YIVDNLERVKALVITHGHEDHIGGIPFLLKQANVPIYAGPLALALIRGKLEEHGLLRDAV
LYEINHNTELTFKHMSVTFFKTTHSIPEPLGIVIHTPQGKVICTGDFKFDFTPVGDPADL
HRMAALGKDGVLCLLSDSTNAEIPTFTNSEKVVGQSIMNIIEGIHGRIIFASFASNIYRL
QQAAEAAVKTGRKIAVFGRSMEKAIVNGIELGYIKVPKGTFIEPNEIKHYHASEILIMCT
GSQGESMAALARIANGTHRQVSLQPGDTVIFSSSPIPGNTVSVNKLINTIQEAGVDVIHG
KVNNIHTSGHGGQQEQKLMLSLIKPKYFMPVHGEYRMQKVHAGLAVDIGIPEENIFIMEN
GDVLALTSDSARIAGHFNAQDIYVDGNGIGDIGTAVLRDRRDLSEDGVVLAVATVDFETQ
MILAGPDILSRGFIYMRESGELIRESQRVLFNAIRIALKNKDASIQSVNGAIVNALRPFL
YEKTEREPIIIPMVLTPDSQ
NT seq
1683 nt
NT seq
+upstream
nt +downstream
nt
atgacaaatatcagtttaaggcctaatgaggttggggtttatgcgattggtggtctggga
gagatcggcaaaaacacctacggtattgagtatcaagatgaaatcatcattgtcgatgcc
ggtatcaaattcccagaggacgatctgctagggattgactatgttatccccgattactct
tatattgttgacaatttggagcgcgtcaaggctcttgtgattactcatggtcatgaggat
catattggcggtattccttttttactaaagcaagctaatgtgcctatatatgcaggcccc
ttagctctagctcttatccgaggaaagctggaggagcacggtctcttacgcgatgctgtg
ctctatgagattaatcacaataccgagctcacctttaagcatatgagcgttaccttcttt
aaaacaactcactctattccagagccacttgggattgttatccacaccccacaagggaaa
gtcatctgtactggcgacttcaagtttgactttacacctgttggtgatccggctgatcta
catcgcatggctgctcttggtaaggacggggttctttgtctattgtccgattcgacaaat
gccgagataccaacctttacgaattctgaaaaggtcgttggccagtcaatcatgaacatt
attgaaggcattcatggacgtatcatttttgcttcctttgcttcaaatatctaccgcttg
cagcaggctgcagaagccgctgttaagacagggcgtaagattgctgtatttggtcgttca
atggaaaaggctattgttaacggtattgagcttggctacatcaaggtcccaaagggaacc
tttattgagcctaatgagattaaacattaccacgctagtgagattttgatcatgtgtacc
ggcagtcaaggggagtctatggccgcccttgctaggattgccaatggtacccacagacag
gtcagcttacagcctggagacactgtcatcttttcatcaagtccaattcctggtaatacc
gtcagcgtcaataagctaatcaatacgattcaggaggctggagttgacgttattcatgga
aaggtcaacaatatccacacctccggtcatggtggccagcaggagcaaaagctaatgctt
agccttattaagccaaaatactttatgcctgtccatggtgaataccgtatgcagaaggtt
catgctgggcttgctgttgatattgggattccagaggaaaatatctttatcatggaaaat
ggtgacgtattggccttgaccagtgatagcgctcgtatagccggtcatttcaatgctcag
gacatttatgtagatggcaatggcattggagatattgggacagcagtccttcgcgatcgt
cgtgatctttcagaggacggggttgtccttgcagtggcgactgttgattttgagacacag
atgatcttagccggaccagatattctcagccgcggctttatctacatgcgcgagtcaggc
gagctcatcagagagagtcagcgcgtgcttttcaatgcgattcgtatcgctctgaaaaat
aaggacgctagtatccagtctgtcaatggtgctatcgttaatgcgcttcgtcccttcctt
tacgaaaagacagagcgcgagcctattatcattccgatggttctaacgcctgatagccaa
tag
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