Streptococcus equi subsp. equi 4047: SEQ_1006
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Entry
SEQ_1006 CDS
T00877
Name
(GenBank) DNA polymerase III alpha subunit
KO
K02337
DNA polymerase III subunit alpha [EC:
2.7.7.7
]
Organism
seu
Streptococcus equi subsp. equi 4047
Pathway
seu03030
DNA replication
seu03430
Mismatch repair
seu03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
seu00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
SEQ_1006
03430 Mismatch repair
SEQ_1006
03440 Homologous recombination
SEQ_1006
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
seu03032
]
SEQ_1006
03400 DNA repair and recombination proteins [BR:
seu03400
]
SEQ_1006
Enzymes [BR:
seu01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
SEQ_1006
DNA replication proteins [BR:
seu03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
SEQ_1006
DNA repair and recombination proteins [BR:
seu03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
SEQ_1006
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_alpha
DNA_pol3_finger
PHP
tRNA_anti-codon
HHH_6
tRNA_anti_2
Motif
Other DBs
NCBI-ProteinID:
CAW93588
UniProt:
C0M8V2
LinkDB
All DBs
Position
992704..995814
Genome browser
AA seq
1036 aa
AA seq
DB search
MFAQLDTKTVYSFMDSLIDLDHYFKQAKRLGYQAIGIMDQDNLYGAYHFIKGCQRHGLQP
ILGLEVAITVKEQALTLKLVAKNDTGYQQLLKLSTEKMSGDLDLDTLVQYLEGIAVIVPF
SQSLRDLGLPFDYFIGIDEASDLSKIDSTERLIPLRTVRYFDNAETETLQMLHAIRDNIS
LADTALVAKDQFLAPCQEMTAIFQEKCPEALVNLVNLTASIAYHFDTDLKLPRFNRDKPA
KEELRELTESGLREKQLWKEPYQFRLAEELAIISDMGFDDYFLIVWDLLRFGRSRGYYMG
MGRGSAAGSLVAYSLRITGIDPVKNNLLFERFLNKERYSMPDIDIDLPDIYRSEFLHYVR
DRYGSEHSAQIVTFSTFGPKQAVRDVFKRFGVPEYELTSLTKKIGFKDTLSTVYEKNIAF
RQTINSRLEFQKAFEIAKRIEGNPRQTSIHAAGIVMSDDHLTNHIPLKKGEDMMVTQYDA
SAVEANGLLKMDFLGLRNLTLVQKMQEKVVNDYGLSIDIEAINLEDPETIALFARGDTKG
IFQFEQHGAISLLKRIKPTSFEEIVATTSLNRPGASDYTQNFIKRRQGQENIDLIDPVIA
PILEPTYGIMLYQEQVMQIAQVYAGFTLGKADLLRRAMSKKNLVEMQRMQEDFLTGARAL
GRSEETARLLFARMEKFAGYGFNRSHAFAYAALAFQLAYFKAHYPEVFFDVMMNYSSSDY
ITDALDFGFEAAQVTINTIPFNDKIERHKIYMGLKNIKGLPREFSYWIIENRPFTSVESF
LCSIPEKYQKTSFLEPLIKIGLFDGFEKNRQKIINNLEGLLTFVNELGSLFADSSFSWVE
TEDYSAAEKYYFEQDLLGVGMSKHPLLAVAEKSTVAVTPITKLVKDTEATLLVQIDAIRV
IRTKSSGQQMAFLSVTDTKQKLDVTLFPEQYAVYKQDLKEGHIYYINGRVKERDNRLQLV
CHQLRLAQSQRYWLLVENHQHDAAISDILTAFSGETPVIIHYQEGKETLELNHIRVDVSK
DLEEAISPYVLKTVFR
NT seq
3111 nt
NT seq
+upstream
nt +downstream
nt
atgtttgctcagttagatacaaaaacagtttattcctttatggatagtttgattgattta
gaccattattttaaacaagccaaacgattaggctatcaagccatagggattatggatcag
gataatctatatggggcatatcattttattaagggctgtcaaaggcatgggcttcagccg
attttaggtcttgaggtggctattacagttaaagagcaggctcttacgctgaagcttgtt
gcgaaaaatgatacaggctatcagcagctcttaaagctttcgactgaaaaaatgtctgga
gacctagacctagacacattggtgcagtatttagaagggatagcagttatcgttcctttt
agtcagagcttgcgtgatttagggcttccttttgattacttcattggcattgatgaggca
agcgacttgtcaaagatagactctacagaaagactgattccgcttagaacggtacgttat
tttgataatgctgagactgagactctgcaaatgctgcatgccattcgtgataatattagc
ttagcagatacggctctagtagccaaggatcagtttttagcgccttgtcaggagatgacg
gctattttccaggaaaagtgccctgaggctttggtgaatctcgtaaatctaacagcttcg
attgcttatcattttgatactgatttaaagcttccgagatttaaccgcgataagccagca
aaagaagagctaagagaattgaccgagtctggtctaagagaaaagcaattatggaaggag
ccttaccaatttcgtctggcagaggagctggctattatttcagatatggggtttgatgat
tattttctcattgtctgggatttgctgcgctttggaaggagtagaggctattatatgggc
atggggcgtggttcagcagcaggcagtctagtggcttattcgttgcgcattactgggatt
gatcctgtcaaaaacaatttattgtttgaacgctttttgaataaagaacgctacagcatg
cctgatattgatattgatttgcctgatatttaccgctcagagtttcttcattatgttcga
gaccggtatggtagtgagcactcagctcagattgttaccttttcgacttttggtcctaag
caggctgttcgtgatgtgttcaaacgctttggtgtcccagaatacgagctaacaagccta
actaaaaaaattgggttcaaggataccctgagcactgtttatgagaaaaatatagccttc
agacagaccattaatagccgcttagagtttcaaaaggcatttgagatagctaagcgcatt
gaaggcaatccaagacagacctctattcacgctgctggtatcgtgatgagtgatgaccat
ctgaccaaccatattcccttaaaaaagggggaggatatgatggtgactcagtatgatgcc
agtgctgttgaagctaatggcttgctgaaaatggattttcttggtctgagaaatttgacg
cttgtacagaaaatgcaggaaaaggtggtcaacgattacggtctttcaattgacattgaa
gctattaacctagaggatcctgaaacgatagccttgtttgctaggggtgataccaagggc
atttttcaatttgaacagcatggtgcgattagcctgttaaaacggatcaagccgactagc
tttgaggaaattgttgcgacaaccagcttaaatagaccgggagcaagtgattacacgcag
aattttattaagcgccggcagggacaggaaaacattgatctaatagatccggtgattgct
ccgatattagagccaacctatggtatcatgctttatcaggagcaggttatgcagattgct
caagtttatgcaggctttacacttggaaaggccgatttgctacggcgtgctatgtctaag
aaaaacctcgttgagatgcaaagaatgcaggaggattttctgactggtgctagagccttg
ggtcgctctgaggagacagccagactattgtttgcacgtatggaaaaatttgcaggctac
ggctttaaccgcagccatgcctttgcttatgctgccctagcctttcagctagcctatttt
aaagcgcactatcctgaggtattttttgatgtcatgatgaattattctagcagtgattac
atcacagatgcgttagattttggctttgaggccgcgcaggtgacgataaacaccattccc
ttcaatgataagattgagcgtcataagatttatatgggcttaaaaaacatcaagggtctt
cctagagaattttcgtattggatcattgaaaataggccctttaccagtgttgaaagcttt
ttgtgcagcattcctgaaaaataccagaaaaccagcttcttagagccccttatcaaaata
ggcctgtttgatgggtttgaaaaaaatcgccaaaaaatcattaacaacttagaaggactg
ctaacctttgtcaatgaattgggatcactttttgcggattcctcctttagctgggtagag
actgaggattattcagctgctgagaaatattactttgagcaggatttgcttggtgttggc
atgagcaagcaccccttgctagctgtcgctgaaaaaagcacagtagcagtcacaccaatc
acaaagttagtgaaggatacagaagctactttgctggttcaaatagatgcgatcagggtt
attcggacaaaatcaagcggacagcagatggcctttttgagtgttactgataccaaacag
aaattagatgttaccctttttcctgagcaatatgctgtctataagcaagacctaaaagag
gggcatatttactatatcaatggcagggtaaaagaaagagataaccgcttgcagctagtc
tgtcaccagcttcgattagctcagagtcaaaggtattggctattggttgaaaaccatcag
catgatgctgctatttctgacatattaacagccttttcaggggagactcctgttattatc
cattatcaagaaggcaaagaaaccttagagttaaaccatattagggttgatgttagtaag
gatttggaggaggctattagcccctacgtgttgaaaacggtttttcgataa
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integrated database retrieval system
