Streptococcus equi subsp. equi 4047: SEQ_1427
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Entry
SEQ_1427 CDS
T00877
Name
(GenBank) putative single-stranded-DNA-specific exonuclease
KO
K07462
single-stranded-DNA-specific exonuclease [EC:3.1.-.-]
Organism
seu
Streptococcus equi subsp. equi 4047
Pathway
seu03410
Base excision repair
seu03430
Mismatch repair
seu03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
seu00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
SEQ_1427
03430 Mismatch repair
SEQ_1427
03440 Homologous recombination
SEQ_1427
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
seu03400
]
SEQ_1427
DNA repair and recombination proteins [BR:
seu03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
RecJ
SEQ_1427
DSBR (double strand breaks repair)
HR (homologous recombination)
RecFOR pathway proteins
SEQ_1427
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
RecET pathway
SEQ_1427
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ssDNA-exonuc_C
RecJ_OB
DHH
DHHA1
DUF892
Motif
Other DBs
NCBI-ProteinID:
CAW94297
UniProt:
C0MAM7
LinkDB
All DBs
Position
complement(1427138..1429348)
Genome browser
AA seq
736 aa
AA seq
DB search
MITSKYQWTIADKEPDAGFFKLAQAKGLSQTAAKLIYDRGVHTEEELTSFLTADLSQLHD
PYLLNDMEKAVHRIRQAIEGLERILVYGDYDADGMTAASIVKETLEMMGAEPLVYLPNRF
TDGYGPNQSVYKYFIEQEQVSLIITVDNGVSGHEAVAFAQAQGVDVIVTDHHSLPAELPD
AFAIIHPEHPAAAYPFQKLAGCGVAFKLASALLETIPVDFLDLVAIGTIADMVSLRGENR
ILVKNGLAVLKETERLGLQELMKLSEVDLAHFDEDVISFKLAPQLNALGRLDDPNPAIDL
LTGFDDEELHELALMISSKNEERKVLVQEIFAQAMAMLDLDKPVQVLAKSGWHPGVLGIV
AGRIMEEIGQTVLVLTIDEGLAKGSARSLESINIFEALNSNRSLFTAFGGHEGAAGMTLP
SDRLEELSELLCQYVAAKGHDGQEKNTLLINGELDLEALSIDSLNKLLLLAPFGMDNKKP
VFYLKDFTIKQARTIGQQQSHLKFKVSKGAVEADVLAFGQGHLIQEYQQSQGLELAVSLA
INHWRGHTSLQLMLVDARVTGVQLFDIRARTARAPEHIPTAVEDQQAKVVVIDEVPDDID
ALKGLFRHREFEAIYFKNHIKRPYYLTGYGSREQFAKLYKTIYQYPEFDLRHKLTLLSDY
LKIEKILLVKMIQIFEELGFVVIEDGLMRVKTDAPKRSIADSVIYQQLKELVKFQELMAL
GSPQEIYQYLMTSEEK
NT seq
2211 nt
NT seq
+upstream
nt +downstream
nt
atgattacgtccaaatatcagtggaccatagctgataaggagccagatgctggcttcttt
aagctagctcaggcaaagggacttagtcagacagctgcaaagctcatctatgaccgaggt
gttcataccgaagaggagcttaccagctttttgacagctgacctatcacagctccatgac
ccttatttgctaaatgatatggaaaaagctgttcatcgcattcgtcaggccattgagggg
cttgagaggattttggtctacggagattatgatgcagatggcatgacagcggcgtctatt
gtcaaggaaacgctggaaatgatgggagcagagcctcttgtttatttgcctaatcgcttt
acagatggctatggtcccaatcaaagtgtttacaagtatttcatcgagcaagagcaggtt
tcgctgattattaccgttgacaatggtgtttcaggccatgaagcggttgcctttgcgcaa
gcacagggggtagatgttattgtaacagaccaccacagcctgccagcagagctacctgat
gcctttgctattattcaccctgagcacccagctgctgcttatccctttcaaaaactagct
ggctgtggcgtcgccttcaagttggcttcagctctgttagagacaattccagtagacttt
ttagatctggttgctattgggacaattgctgatatggtcagcctacgaggtgaaaaccgt
atccttgtcaaaaacgggctggctgttctaaaagagacagaaagactaggcttgcaggag
ctgatgaagctttcagaggttgacttagcgcattttgatgaagatgttattagctttaag
cttgctccgcagctcaatgctctagggcgtcttgacgatccaaatccagctattgatcta
ctgacaggctttgatgacgaagagcttcatgagcttgccttgatgattagtagtaaaaat
gaggaaagaaaggtcttggtacaggagatttttgctcaagcaatggctatgcttgatcta
gacaagcctgtgcaggttttagctaagtctggctggcacccaggggtcttagggattgta
gctggtcggatcatggaggagattgggcagactgttcttgttttgaccattgatgagggg
ctagccaagggctcagccagaagcttagagagcattaatatctttgaagcacttaatagc
aataggagcttatttacagcctttggtggtcatgagggggcagcaggcatgactctgcca
tctgatcgcctagaggagctatcagagctactttgccaatacgtggcagccaagggacac
gatggtcaggaaaaaaacactctattgatcaatggtgaattggatttagaagcattgagt
atagatagtctgaacaagctgctacttctagcaccctttggcatggataataaaaagcct
gttttttacttaaaagattttacgattaagcaggcaaggaccattggtcagcaacaaagt
cacttgaagttcaaggtcagcaaaggagccgttgaggctgatgtcttggcctttggtcag
ggacatctgatacaggagtaccagcaatcacagggcttggaattagcggttagtcttgcg
atcaatcactggcgaggtcatactagcctgcaattaatgctggttgacgctagagtgact
ggggtgcagctgtttgatattcgagcaaggactgctagggcacctgagcatattcctaca
gctgttgaggaccagcaggccaaggttgttgtcatagatgaggttcctgacgatattgat
gccttgaaaggcctttttagacatcgggaatttgaagcgatttactttaaaaatcatatt
aagcgcccttattacctaacaggctatggcagtagagagcaatttgccaagctttataag
accatctatcaatacccagaatttgatcttcgccataagctgaccttgctaagtgattac
ctcaagattgaaaaaatcctcttggtcaaaatgatacaaatttttgaggagttaggcttt
gtagtaatcgaagatgggctgatgagggtaaagactgatgccccaaaacgtagcatcgct
gacagtgtcatttaccaacagctaaaagagctggtaaagtttcaagagcttatggccttg
ggcagtccgcaggagatttatcagtatttaatgactagtgaagagaaatag
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