Streptococcus equi subsp. equi 4047: SEQ_1612
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Entry
SEQ_1612 CDS
T00877
Name
(GenBank) glycosyl hydrolase family protein
KO
K01186
sialidase-1 [EC:
3.2.1.18
]
Organism
seu
Streptococcus equi subsp. equi 4047
Pathway
seu00511
Other glycan degradation
seu00600
Sphingolipid metabolism
seu01100
Metabolic pathways
seu04142
Lysosome
Brite
KEGG Orthology (KO) [BR:
seu00001
]
09100 Metabolism
09103 Lipid metabolism
00600 Sphingolipid metabolism
SEQ_1612
09107 Glycan biosynthesis and metabolism
00511 Other glycan degradation
SEQ_1612
09140 Cellular Processes
09141 Transport and catabolism
04142 Lysosome
SEQ_1612
Enzymes [BR:
seu01000
]
3. Hydrolases
3.2 Glycosylases
3.2.1 Glycosidases, i.e. enzymes that hydrolyse O- and S-glycosyl compounds
3.2.1.18 exo-alpha-sialidase
SEQ_1612
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
BNR_2
Glyco_hydro_16
BNR_3
YSIRK_signal
Laminin_G_3
Sialidase
BNR
Motif
Other DBs
NCBI-ProteinID:
CAW94606
UniProt:
C0MAP0
LinkDB
All DBs
Position
complement(1619076..1623716)
Genome browser
AA seq
1546 aa
AA seq
DB search
MLFNPIGKEQIRKYAIKKLSVGVASVCVGIGLAAGLPVAVYADDVSEVSLQQPTKAAVTE
ISHEQEPQATDTDSEALVVSEETTVDEAVVANAVTSNAADQTADEEKSNAPIELNKVANG
GFDNDYVSNKNQWQYREGGHSVLTTENGNSYAEVTSGTLDEHILQKVSTTVGKTYTLEAD
VKVEADTPHNGLYLTAKESNHNLQGPVIKEVSLTDTDGTWSHIKLSFTATTSETFVGLVK
WLEASSPEALAASASIDNVSVVEENDYELIWQDEFSGDRLNQENWGYELGSIRGNEQQHY
TDSTENVYLDNGNLVLNVTERYGEDRYANPRGGTSARQVIYDSGSVRTVGKQEFLYGRIE
ARAKLPKGKGAFPAFWTLGADFTLDGDIASTQGYGWPSTGELDIMELIGAPNGEHEGELA
EGDQSNKTVYGTPHFYYIKGDADKDGSYSPTALGGNLTLSDDFYDDYHIFGINWYPDKIE
WYVDGIVYNTMYLTGDDRLEAAAAAFNKPQYLQFNLATGGNWSKNAGYYLASDETAFVID
YVRYYQDAEQKAASEAYYASQPVLKGVKDLTMLEGTSPDLAQAVTTDQEGYVVDFSVENE
YLFTNKGGNTNAALQAAGRDDLSALSELAPGIYNIYYSAVPYNADLGSTVTPTAKIAREV
AILTVLPKEGLIGKKGEPLSTVALPANWQWVTPEEILGSAEHYQIKYTTEGGRAVYTSIE
ASYISDQPISDQASILVDLGNAILDATAEKAAVTDDEALGKLDDVMNLTQGTVTIRYRLD
TADTTVRSSSPLALLSISNQASANEYASFFIEPKNNKIGLEFKGAEVPIVKVGSGFNLLT
NSDWQTISYVFTGSRLKIYLNGDLYGEADFAGFMKQLPWKASADTLTIGGLKRTYDGESV
LHWGLKGLVDQVLIDTDVYDLTDIAKAHQPTLRPVTGEKTNVWDKYDEGVFEYRIPSVVK
TPSGTLIAAADARKKHYNDWGDVATVVRISHDDGKTWSNNITVLDMPTQPYFTTQYSLAD
WNTNMTQSAFSIDSTLLTDASGKLYLLVDVFPESQGAVASKAGSGYELINGQYYLNLYDF
DNNKYTVREGGIVYDQSGHQTDMYVDEGNFETAFSTRGNLYQTEAGEDILLGNIYLRSGR
TKQGITREGSQTAPLFTYMTSFLWLLTSEDEGQTWSTPLDITPQIKEDWMGFLGTGAAAG
IEIDAVNAEGEQVKRLVFPIYYTNQQNATSASLGRQSSANIFSDDGGQTWQRGESPNDGR
IYGHNQQTTSKDFDTSVTELTENQIIQLNNGHLLQFMRNTGKTIVIARSTDYGMTWDDNP
TITDLPEPYVNLSAIHMMVDGKEYVVLSNPLGEPSGEQLTIRNQRMKGILRVGEVLEDDS
IHWVASTIFEPKRFAYSSLVQLDDERVGLLYEYSGQITYSTFNIKQMISDQFREDKAEIE
EVTITSAAPKQNGKVSITIQMTFNQPMFILGDRQLAVTVNGVDKLASYVSGDGTDTAIFE
LSLESMPEGPITVLPQFDHTIVETKYGIRLTDDKAYTVSYPAAVTA
NT seq
4641 nt
NT seq
+upstream
nt +downstream
nt
atgttatttaatcctatcggaaaagagcaaattagaaaatatgccatcaaaaagcttagt
gtcggtgttgcttcagtgtgtgtgggtattggtcttgctgctggtctgccagtggctgtt
tatgctgatgacgtttcagaggtaagcctgcagcagcctacgaaagcagcagtaacagag
ataagccatgagcaggagcctcaagctacagatacagatagcgaggccttagtagtctca
gaggagacgacagtagatgaggcagtagtagctaatgctgtgaccagcaatgctgctgat
cagacagcagacgaagagaagtctaacgctccgattgagctcaataaggtggctaatggt
ggttttgacaatgattatgtgtccaataagaatcagtggcaatatagagagggaggtcat
tcagtcctcacaacagagaatggtaatagctatgctgaggtaacaagcggcactttagat
gagcatatccttcaaaaggtgtctacaacggttgggaaaacctatacgctagaggctgat
gtgaaggttgaagctgacacacctcataatggcttataccttaccgctaaagagtccaat
cacaatcttcagggccctgttatcaaagaggtcagcctcacagatacagacggtacttgg
tcacatatcaagctctcctttacagcaacgacttcagaaacctttgttggcttagtcaaa
tggttggaagcctcttctccggaagccttggctgcctctgctagtattgataacgtgagt
gtcgtagaggaaaatgattatgaattgatttggcaggatgagttttcaggagatcggtta
aaccaagagaactggggatatgaattgggaagtattcgcgggaatgagcagcagcactac
acagacagcacagagaatgtctatcttgataatggcaatcttgttttaaacgtcacagag
cgttatggggaggaccgttatgccaatcctagaggaggaacaagcgcacgtcaggtcatt
tatgattcaggaagcgtacgaacggttggcaagcaagaatttttatatggtcgtatcgaa
gctagggccaagcttcccaagggtaagggagcctttccagccttttggacattgggggct
gattttaccttagatggtgatattgcgtcaactcaaggctatggctggccaagcacaggt
gagcttgacattatggagctaatcggtgctcctaacggagagcatgagggtgagcttgcc
gaaggtgatcaaagcaacaaaacagtttacgggacccctcatttttactatatcaagggt
gatgcagacaaagatggaagctatagcccaacagcattgggtggcaatctgacattaagt
gatgacttttatgatgactaccatatctttggtattaattggtatccggataagattgaa
tggtatgttgatgggattgtttataataccatgtatttaaccggtgatgatcgcttagag
gctgccgcagctgcctttaataagcctcaataccttcagtttaaccttgctactggaggc
aattggagtaaaaatgcaggctactatctagcttcagatgagacggcctttgtgattgat
tatgtgcgttattaccaagatgctgagcaaaaagcagcctcagaagcttattatgcctca
cagccagttctcaagggggtcaaggatttgaccatgctagagggaaccagtcctgattta
gctcaagctgtaaccactgatcaggaaggctatgtggttgatttttcagttgaaaatgaa
tacttgtttactaacaagggtggaaataccaatgctgctttacaggctgctggtcgagat
gatttgtcagccttgtctgagctagctcctggtatttataacatttactatagtgctgtt
ccttacaatgctgatttaggctcaacagtaacaccaactgctaagattgcaagagaagta
gctattttaactgtattacctaaagaaggtctgattggtaagaagggagaacccttatct
acagtagccctgccagccaattggcaatgggttacgccagaggagatcttgggaagtgca
gagcattatcagatcaaatacaccacagaaggcggacgagctgtttatacaagcatagaa
gcaagctatatctcagatcagccaatctcagatcaagcatccattttagttgatttaggc
aatgctattttggacgcaacagcagaaaaagcagccgtaacagatgacgaggctcttggt
aagctagacgatgtgatgaacctaacccaaggaactgtaacaatcagataccgtctagat
actgctgatacaacagtgagaagctcatcgcccttggccttgttatcgatctcaaatcaa
gcatcagctaatgaatacgcctctttctttatcgagcctaaaaacaataaaataggtctt
gaatttaaaggagctgaggttccgattgtaaaagttggctcaggctttaatttattaacg
aactcggactggcagacgatcagctatgtctttacagggtctaggctaaagatttacttg
aatggtgacttatatggggaagctgactttgctgggtttatgaagcaattaccttggaag
gcttctgctgatacgctaacaattggaggcttgaaacgcacctatgatggtgagtcggtc
cttcactgggggttaaagggactggttgatcaggtgctgattgatacagatgtgtatgat
ctgacagatattgccaaggctcatcagccaacccttcgaccagttactggtgaaaagacg
aatgtttgggacaaatatgatgaaggggtctttgaatatcggattccctctgttgtcaaa
acgccatcaggaaccttgatagccgcagcagatgcaagaaagaagcactacaatgactgg
ggagatgttgcaactgttgtcaggataagccatgatgatggcaaaacctggagtaataac
attacggtcttagatatgccaactcagccttattttacaacacaatatagcttggctgat
tggaataccaacatgactcaatctgctttttcaatagactccaccttgctaacagacgct
tctggcaagctttatttgctggtagatgtctttcctgagtcacagggtgctgttgcttct
aaagcaggctcaggatatgaattgattaacggtcagtattatttaaatctttatgatttt
gacaataataaatacactgtgcgtgaaggtggtatcgtctatgaccagagtggccatcag
acagatatgtatgttgatgagggcaattttgagacagcctttagcacacgcggcaacctc
tatcaaacagaggcaggagaggatattctactagggaatatttatctgagaagtggtcgc
actaagcaaggcatcactagagaaggctcacaaacagctcctctatttacttacatgacc
agctttttatggctgctaaccagtgaagacgaagggcaaacctggtccacacctcttgat
attaccccacaaataaaagaagactggatgggatttttaggtacgggtgccgcagctggc
attgaaatagacgcagtcaatgcagagggtgagcaggtgaaacggttagttttcccgatt
tactataccaatcaacaaaatgcgacatcagctagtctaggtcgtcaaagcagtgctaat
atttttagtgatgatggcggtcaaacatggcaacgaggtgaatcaccaaatgatggcaga
atttatggtcataaccaacaaacaacctctaaggattttgatacatcagtcacagaattg
acagaaaatcaaatcattcagctaaacaatggtcacttattacagtttatgcgcaatacc
ggaaagacaatcgttattgccagaagcacagactatggtatgacttgggacgataatcct
acaatcacagacctcccagagccttatgtcaatttgtcagctattcatatgatggttgat
ggcaaagaatatgttgttttatccaatcctttaggagagccctcaggtgagcaactgacg
attagaaatcagcgcatgaaagggattctgcgtgtcggtgaggtcttagaggacgatagc
attcattgggtcgcttcaaccatttttgagccaaagcgttttgcttactctagcttggtt
caactagacgacgagagggttggtttgttatacgaatatagtggtcagatcacctattca
acctttaatatcaagcagatgatctcagaccagtttcgtgaggataaggctgaaattgaa
gaagtaacaataacgtcagcagctccaaagcaaaatggcaaagtaagcataaccattcag
atgacctttaatcaaccgatgtttattcttggtgatcgtcagttagcagttactgtaaat
ggcgtagataagcttgccagctatgtttcaggagatggcacagacacagcgatatttgaa
ttgtctctggagagtatgcctgaaggaccgataactgttttaccgcagtttgaccatact
attgttgaaaccaaatatgggattagattgacagatgacaaggcatacactgtctcttat
cctgctgctgtgacagcatag
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integrated database retrieval system
