Streptococcus equi subsp. equi 4047: SEQ_1995
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Entry
SEQ_1995 CDS
T00877
Name
(GenBank) polyribonucleotide nucleotidyltransferase
KO
K00962
polyribonucleotide nucleotidyltransferase [EC:
2.7.7.8
]
Organism
seu
Streptococcus equi subsp. equi 4047
Pathway
seu03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
seu00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
SEQ_1995
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
seu03019
]
SEQ_1995
03016 Transfer RNA biogenesis [BR:
seu03016
]
SEQ_1995
Enzymes [BR:
seu01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.8 polyribonucleotide nucleotidyltransferase
SEQ_1995
Messenger RNA biogenesis [BR:
seu03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Other RNA degradosome components
SEQ_1995
Transfer RNA biogenesis [BR:
seu03016
]
Prokaryotic type
tRNA degradation factors
SEQ_1995
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_PH
RNase_PH_C
S1
PNPase
KH_1
KH-I_KHDC4-BBP
KH_2
S1_2
SPATA25
OB_RRP5_4th
TRAM
Motif
Other DBs
NCBI-ProteinID:
CAW95251
UniProt:
C0M913
LinkDB
All DBs
Position
complement(2014620..2016764)
Genome browser
AA seq
714 aa
AA seq
DB search
MSKQTFTTTFAGKPLVVEVGQVAKRANGATVVRYGESTVLTAAVMSKKMSTGDFFPLQVN
YEEKMYAAGKFPGGWMKREGRPSTDATLTARLIDRPIRPMFAEGFRNEVQVINTVLSYDE
DASAPMAAMLGSSLALSISDIPFNGPIAGVQVAYVEGEFIINPDKAQQEASLLELTVAGT
KDAINMVESGAKELPEAIMLEALLVGHKAIQELIAFQEEIVAAVGKEKAEVELLQVAADL
QAEIIETYNADLQQAIQVEEKKAREAATEAVKERVIAAYEERYAADEEHDRIMRDVAEIL
EQMEHAEVRRLITEDKVRPDGRRVDEIRPLAAEIDFLPRVHGSGLFTRGQTQALSVLTLA
PMGDTQIIDGLEPEYKKRFLHHYNFPQYSVGETGRYGAAGRREIGHGALGERALAQVLPS
LEAFPYAIRLVAEVLESNGSSSQASICAGTLALMAAGVPIKAPVAGIAMGLISDGTNYTV
LTDIQGLEDHFGDMDFKVAGTRQGITALQMDIKIEGITPQILEEALAQAKKARFEILDLI
EATIAEPRPELAPTAPKIDTIKIDVDKIKVVIGKGGETIDKIIAETGVKIDIDEEGNVSI
YSSDQDAINRAKEIIASLVREAKVGEVYHAKVVRIEKFGAFVNLFDKTDALVHISEIAWS
RTTNVSDVLEIGEEVDVKVIKVDDKGRIDASMKALVPRPPKPEKSEAKKEGKHD
NT seq
2145 nt
NT seq
+upstream
nt +downstream
nt
atgtcaaaacaaacatttacaacaacctttgcaggcaaaccacttgttgttgaggtcggt
caagtagccaagcgagcaaatggtgccactgtcgttcgttatggggagtctacagtgcta
actgctgctgtcatgtctaagaagatgtcaacaggagactttttcccgcttcaagtcaat
tatgaagaaaaaatgtatgccgcaggtaaatttcccggtggctggatgaagcgtgaggga
cgtccgtcaacagatgcgaccttaaccgctcgcttgattgaccgccctatccgtcctatg
tttgctgagggctttcgtaatgaggtccaggtgattaatactgtcctgtcttatgacgaa
gatgctagtgcccctatggctgctatgcttggtagctcattagccctatcgatttcagat
attccttttaatgggccgattgctggtgttcaggtggcctatgttgagggtgaatttatc
atcaatcctgataaggcccagcaggaggcttcattattagagttaaccgtagcaggaaca
aaagatgcgatcaatatggttgaatctggtgctaaggaattgccagaggctattatgcta
gaagcacttttggttggccataaggctatacaggagttgattgcttttcaagaagagatt
gttgcagcggtgggcaaggaaaaggctgaggtagagctattacaggttgctgctgatttg
caggctgagatcatagagacttacaatgctgatttgcagcaggctattcaggttgaggag
aaaaaagcacgtgaagccgcaaccgaggctgtcaaggagcgtgtcatagctgcatacgag
gagcgttatgcagcagacgaagagcatgaccgtatcatgcgtgatgtggctgaaattttg
gagcaaatggagcatgctgaggttcgtcgcctcatcactgaggataaggttcgtcctgat
ggtcgtcgtgttgatgagattcgtccgcttgctgctgagattgatttcttaccaagggtg
catggctcaggcctctttacgcgcggtcaaactcaagctttgtctgtcttgactctagcc
ccaatgggagatactcaaattattgatgggcttgagcctgagtacaaaaaacgcttcttg
caccactataatttccctcaatattctgttggtgagacaggccgctacggtgcagcaggg
cgtcgtgaaattgggcatggtgctttaggcgagcgcgctcttgcacaagtccttccaagc
cttgaggcatttccatatgctattcgtctagtggctgaggtattggaatcaaacggttct
tcctcgcaggcctctatctgtgcagggacgcttgctttgatggctgctggtgtgccgatc
aaggcaccggttgcgggtattgctatgggacttatctctgatgggaccaattatactgtt
ttaacagacattcaggggttagaggatcattttggcgacatggacttcaaggttgctggg
acacgccaagggattacagcactgcaaatggatatcaagatcgaaggtatcacccctcaa
atcctagaagaagccttggcgcaggctaaaaaggctcgctttgaaattcttgacttgatt
gaggcaaccattgctgagcctcgtccagaattggcaccaacagcaccaaagattgatacc
atcaagattgatgttgataagattaaggtggttattggtaagggtggcgaaaccattgat
aagattattgctgagacaggtgttaagattgacattgatgaggaaggaaatgtttcaatc
tactcaagtgatcaggacgctatcaatcgtgctaaggaaatcattgctagcctagtacgt
gaggctaaggtaggagaggtctaccatgctaaggttgtccgtattgaaaaatttggtgcc
tttgttaacctctttgacaagacagatgcgctggtgcatatctctgaaattgcttggagc
cgcactaccaatgtctcagatgttcttgaaatcggtgaagaggttgacgttaaggttatt
aaggttgatgataagggacgtattgacgcatcaatgaaagccttggtgccacgcccgcca
aagccagaaaaatcagaagcaaaaaaagaaggcaaacatgactaa
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