Saccharomyces eubayanus: DI49_0018
Help
Entry
DI49_0018 CDS
T08138
Name
(RefSeq) PTA1-like protein
KO
K06100
symplekin
Organism
seub
Saccharomyces eubayanus
Pathway
seub03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
seub00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
DI49_0018
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
seub03021
]
DI49_0018
03019 Messenger RNA biogenesis [BR:
seub03019
]
DI49_0018
Transcription machinery [BR:
seub03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Transcription termination factor
DI49_0018
Messenger RNA biogenesis [BR:
seub03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Cleavage stimulation factor (CSTF) complex
DI49_0018
U7-dependent histone pre-mRNA processing factors
DI49_0018
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SYMPK_PTA1_N
Spore_coat_CotO
Motif
Other DBs
NCBI-GeneID:
28929156
NCBI-ProteinID:
XP_018224067
LinkDB
All DBs
Position
I:complement(32354..34759)
Genome browser
AA seq
801 aa
AA seq
DB search
MVANSRHRDSRSSAMSSAEMEQLLQAKTLAMHNNPTEMLPKVLETTASMYHNGNLSKLRL
PLAKFFTQLVLDVVSVDSPIANTERPFIAAQYLPVLLAMAQSTTDVLVYKNIVLIMCASY
SLVLDLVAKTSNAETFDQLCALKAFVLSHWRTAYPLQTTTHDEGDVEPWLAQIDKNVGVK
LATIKFMSEAVLAQTKSSNGNDINSASVPDNHPVLNRSALENEAKKLLDTLLNYLIEEQY
MVSPVFIGIINTLSFIIKRRPQTTIRILSGLLRFNVDAKFPLEGKPDLNYRLSKRFVERA
YKNFVQFGLKNQIITKSLSSGSGSGSSIYSKLTKISQTLHVIGEETKSKGILNFDPSKGN
SKKSLSKQDKLKYISLWKRQLSTLQSTAAVERKASLPVPALTAVASTENMLDQLKILQKY
TLNKASHQGNHFFNNSPKPITNTYSSVYSLMNSSNSNQDVTQLPNDTLIKLSTEAILQMD
TTRLISGLSIVASRYTDLMNTYVNSVPSSSSXKRKSDDDEDDDDVNNGDDDGLADNSKKV
KVEVEEPTEDPEDPEDDDRMQKMLQDETAQEDAGGATRPSSTAREIAPPFQPDSLTQDEK
LNYLTRLTTKLFELSNRQDSTPASKSLPPSPILLDDDDSSSWLHVLIRLVTRGIAAQEAS
DLIREQLLAFFIQDFEQRVSLIIEWLNEEWFFQTSLRQEPANYNKWSLQVLESLGPFLEN
NHRRFFIRLMSELPSLHAGHLDALKPICLDPARSSLGFQTLKFLVMFRPPVQAIVRDLLL
QLKQEDEGLHKQCDSLLDRLQ
NT seq
2406 nt
NT seq
+upstream
nt +downstream
nt
atggttgctaacagcaggcacagagacagcaggagcagtgcaatgtcgtcagcagagatg
gagcagttgctacaggccaagacgctggccatgcacaacaacccgacggagatgctaccc
aaggtcctcgagaccacggcgtccatgtaccacaacggcaacctcagcaagctgaggttg
cccctagccaagttcttcacacagttggtgctggacgtggtgtccgtagactcgccaatt
gccaacacggagaggccgttcatcgcggcacagtacctgcccgtgcttcttgccatggca
cagtccaccacggatgttctggtgtacaagaacatcgtgctcatcatgtgtgcgtcatac
tcgctggtgctagacctggtcgccaagacgtcgaatgcggagacgttcgaccagctgtgc
gcattgaaggcgtttgtactctcgcactggaggaccgcgtacccgttgcaaactaccact
cacgacgagggcgacgtcgagccatggctggcacagatcgataagaacgtgggtgtcaag
ctggccacgatcaagttcatgtccgaggccgtgctggctcagaccaagtcctccaacggc
aacgacatcaactccgccagcgtccccgacaaccaccctgtgctaaaccggtcggcactg
gagaacgaggccaagaaactgctggacacgctgctaaactacctcatcgaggagcagtac
atggtctcgcctgtctttatcggcatcatcaacaccctgtccttcatcatcaagagacgt
ccacagacaaccataagaattctttccggcctcttgcggttcaacgtcgacgccaagttc
ccgttggagggcaagccggacctgaactacagattgtccaagaggtttgtagagagagcg
tacaagaacttcgtgcagttcgggctgaaaaaccagatcatcaccaaatcattgtcgtcg
ggctcgggctcaggctcatcgatctattccaagttgaccaagatctcacagacactacac
gtaattggtgaagaaaccaagagcaagggtatcctgaacttcgacccctccaagggcaac
agtaagaaaagtttgtccaagcaggataaactgaagtacatctcgctatggaaaagacag
ctatctacgctacagtccaccgcggccgtggaaaggaaggcctctttgcccgttcctgcc
ctcacagcagtagcctcaacggaaaacatgctcgatcaattgaaaatcctacagaaatac
accctcaacaaggcctcccaccagggaaaccacttcttcaacaactcgcccaaacctatc
accaacacgtactcgtccgtgtactcgctgatgaacagctcgaactccaatcaggacgtg
acccagctgcccaacgacacgctgatcaagctgtccacggaggctatcttgcaaatggac
accacgagactaatatccgggttgtctatcgtcgcttcaaggtacacggacctgatgaac
acgtacgtgaactcggtaccgtcctcgtcgtccycgaagagaaagtcagacgatgacgaa
gacgatgacgacgtaaacaacggcgacgacgacggcctggcggacaacagcaagaaagtc
aaagtcgaggtagaggagccaacggaggaccccgaggaccccgaagacgacgaccgcatg
caaaagatgctacaagatgaaaccgctcaagaggacgcgggcggtgccacccgacccagc
tccaccgcgagggagattgcgccccccttccaacctgactcattgacgcaggatgaaaag
ctaaactaccttaccaggctgaccacgaagttgtttgagctgtccaaccgccaggactcc
accccagcgtcaaagtcgctgccgccctcccccatcctactggacgacgacgactcgtcg
tcgtggctccacgtccttataagactggtcacgaggggaattgcagcccaggaggccagc
gacctcatccgcgaacaactgctcgccttcttcatccaggacttcgagcagcgcgtcagc
ctgatcatcgagtggctcaacgaggaatggttcttccagacctcgctgcgccaggaaccg
gccaactacaacaagtggtccctgcaggtgctcgagtccctggggccgttcctggaaaac
aaccacagacggttcttcatccgcctcatgagcgagctgcccagcctccacgccggccac
ctcgatgccctcaagcccatatgcctggacccggccagaagttcgctggggttccagacg
ctcaagttccttgtcatgttcagacccccagtgcaggccattgttcgcgacctgctcctc
cagctcaagcaggaggacgaaggcttgcacaagcagtgcgactccctcttggacagactg
caatga
DBGET
integrated database retrieval system
