Saccharomyces eubayanus: DI49_0057
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Entry
DI49_0057 CDS
T08138
Name
(RefSeq) VPS8-like protein
KO
K20178
vacuolar protein sorting-associated protein 8
Organism
seub
Saccharomyces eubayanus
Pathway
seub04138
Autophagy - yeast
seub04148
Efferocytosis
Brite
KEGG Orthology (KO) [BR:
seub00001
]
09140 Cellular Processes
09141 Transport and catabolism
04138 Autophagy - yeast
DI49_0057
04148 Efferocytosis
DI49_0057
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
seub04131
]
DI49_0057
Membrane trafficking [BR:
seub04131
]
Endosome - Lysosome transport
Tethering complex
CORVET complex
DI49_0057
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TPR_Vps8
zf_RING_Vps8_fungal
TPR_VPS8_2
VPS8_N
Beta-prop_HPS5
zf-RING_Vps41
zf-RING_5
Beta-prop_VPS8
zf-RING_2
zf-C3HC4_2
zf-C3HC4
zf_RING_Vps8
zf-rbx1
WD40_WDHD1_1st
zf-RING_UBOX
zf-RING_11
zf-ANAPC11
Beta-prop_EML_2
GrpE
zf-C3H2C3
WD40
Motif
Other DBs
NCBI-GeneID:
28929195
NCBI-ProteinID:
XP_018224105
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Position
I:117188..121006
Genome browser
AA seq
1272 aa
AA seq
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MEQNGLDHDSRSSIDTINDTQKSFLEFRSYTHLSEKLASNTAFPASQPGDDEGPKGVATA
ISQGSESVVSWTTLTHVYSILGAYGGPTCLYPTTTYFLMGTSRGSVLIFNFNEHLQTILV
PTLSEDPAAHSIRSPVKSIVVCSDGTHVAASYESGSICVWNLNVGYRVKTAHEPTSGMTP
TPSIPAILHIDDHLSKEITGLDFFGTRHTALIVSDRTGRISLYNGYRRGFWQLVYNSRKI
LDLNSHNERLIRSRLSPLITKDKYSTNLLSVLTNTHFALLSLSPHVSLVCQEPIESSIRH
SLVVNSSISWTYNSSRVAYSVNNKISVISVSLSDLNVQSIQHSSEFPESILSIQWIDQFL
LGVLTISHQFLVLDPQNDFKVLLRLDFLIHDLIIPPNKYFVISRRSFYLLTNYSFKIGKF
VSWSDITLRRILKGDYLGALEFIESLLQPYCPLASLLKLYESPEERTKQLMEPFYNLSLA
ALRFLIKKDSADYDRVYQLLMVVVRVFQRFPIKSDSIPSLNVFLEQALEFFEPKDTAVYF
EVVANIVAQGSITSISPVLFKSVIDYYAKEENIKVIEDLIIVLDPVTLDVDLAVKLCQHY
NLFDLLIYIWNKIFDDYQTPLVDLIYRISNQNEKCIIFSGPQAPPETAVFDYLTYILTGR
QYPQNLFISPSSKCIQIQKELSKFVFSGYSVEWPLNSDQKLYICENPEEEPAFPYFNLLL
KFNPNRFLAMLNEVFEASLFNDDNDMMKPTEETESVSRQYIIDLLMDVIRTSEHSDDVKV
LVAIFIATSISKYPQFIKLSNQALDCVVNTICSSKAEGTFEISQLALESLLPYYHSKTTE
NFILELKERKFNKVLFHLYKSENKYSNALLLLLETDNVEKEYNTDILSITEYILKKCPPA
SLEYSKVVGVIENNFELLLSRVGIEKCVAIFSDFDFSLHQEILKVETEETQQRYLDKLFS
TSNISNKTDKRLRSLYIELNCKYKGKKEIISWLNRLDLNNGESLHILDLVTQNSNFEAAA
VIHERLLEFNLAVKDLLECIEQCLNEGETNINVLSDYLRKAIDDCNSAATEKKSCWIFLI
TFLITLYGNYSKHDDKKNLCNELLQEAFLGLVRSKSSSQKNSGGEFWEIMSFVLEXQDVI
LMKVQDLKQLLLNVFTTYKLERSLSELLQKIIEDSSQDLVQLYRKFLNEGWSIHNDDCEV
CGKIIWGAGLDPLLFLVWEKVQRHRDMISLDLETPLVIFKCHHGFHQTCLENLAQKPNEY
TCLICDTKSDSK
NT seq
3819 nt
NT seq
+upstream
nt +downstream
nt
atggaacaaaacggccttgatcatgatagcagatccagcatcgataccatcaatgacacc
caaaagagttttttagaattcagatcgtatactcacttgagtgaaaaattggcatccaac
accgcatttccagcatcacaaccgggggacgatgaggggcctaaaggggtggcaactgca
atatcacaaggttctgaatctgtagtctcatggacgactttgactcatgtatattccatt
ctgggtgcctatggaggacccacttgtttatatcccacaaccacatattttttaatgggt
acttctagaggatccgtactgattttcaatttcaacgagcatttgcaaacaattctagta
ccgaccttatccgaggaccctgctgcccattccataagaagcccagtaaaatcgattgtc
gtatgttctgatggtactcatgtggccgcctcgtacgagagtggcagtatatgcgtttgg
aatttgaacgtggggtatagagtcaaaactgctcatgaacccaccagtggtatgaccccc
accccatctataccggcaattttacatatcgacgaccacctaagcaaagagattacgggc
ttagatttcttcggaactcgacatactgcactcatagtcagtgacagaacaggtaggata
tcgctttataatggttatagaaggggattctggcaattagtttacaattccaggaaaatt
ttagacctcaattcccacaatgaaagattaataagatcgcggctgtctcccctaataaca
aaggacaaatactccactaatttgttaagtgtactcacaaatacccattttgcccttctt
tcattatccccgcatgtttctttagtatgtcaagaaccaattgaatcctcaatacgacat
tccctggtggtgaatagttccatttcatggacatataactcttccagagtcgcatattct
gtaaataataaaatttccgttatttctgtgtctttatctgacctgaatgttcaatccatt
cagcattcttctgagtttccggaatctatattatctattcaatggattgatcagtttctt
ttgggtgtcttaaccatatctcatcaatttttagtactggatcctcaaaacgatttcaag
gtcttactaagactagattttttaattcacgatttaatcatccctcctaataaatacttt
gtgataagcagaagaagtttttacttgttaacaaactactcgttcaagattggcaaattt
gtttcttggtcggacattactttaagacgaatattaaaaggtgattatttgggcgcatta
gaatttatagaatctcttttacagccttattgtccattggccagtctgttaaagctatac
gaaagcccagaagaaagaactaagcaacttatggaaccattttataatttgtctctggcg
gctttaagatttctaataaaaaaagacagtgcagactacgatagagtttaccagctatta
atggttgtcgttcgtgtttttcaacgatttcccataaaatcagattcaattccttccctg
aacgtctttttggagcaagctctggaattttttgaacccaaagacactgcggtatatttt
gaagttgtagcaaacattgttgctcaaggttctattacgtcaatctccccggttcttttc
aaatctgtaattgattattacgccaaggaagaaaacataaaagttattgaagatttgatt
attgtgctagatcccgttaccctagatgttgatctagcagtcaagttgtgccagcactat
aatttgtttgacctgctaatatacatctggaacaaaatatttgatgattaccaaaccccg
ctggtggacttgatatacagaatatccaaccagaacgaaaaatgtattatctttagtgga
cctcaagcacctcctgagacggctgtctttgactatctgacgtatattcttactggcaga
cagtatccacagaacctgttcatatctcctagtagtaaatgtattcaaatacaaaaagaa
ctgtccaagtttgtttttagtggttactcagtagaatggccattgaacagcgaccagaaa
ctctatatatgtgaaaatccggaagaagaacccgcatttccctattttaaccttttgtta
aaatttaatcccaacagatttttagcaatgcttaatgaagtattcgaagcctccttattc
aatgacgataatgacatgatgaaaccaaccgaagaaactgagtccgtcagtaggcaatat
attatcgacttgctaatggatgttataagaacctcagaacattctgatgatgtgaaagta
cttgttgctattttcattgcaaccagtatatcaaaatatcctcaattcattaaattatcc
aatcaagcactagactgcgtcgttaacactatatgctcttcaaaagccgaaggtacattt
gaaatctcgcaactagctttagagtctcttctgccttactatcattcaaagaccactgaa
aattttatattggaattaaaggaaagaaagttcaataaagtcctttttcatctttataag
agtgaaaacaaatattccaacgcgcttttgctccttttagaaaccgataatgttgaaaag
gaatataatactgacattctatccataaccgaatatatactcaagaaatgtccacctgca
agcttggaatacagtaaagtagttggtgttattgaaaataacttcgaacttcttctttca
agagtcggtatcgaaaaatgcgtggcgatattttcagactttgactttagcctccatcaa
gaaattttgaaagtagagactgaagaaactcagcaaagatacttagataagctgttttct
acgtcaaatatcagcaataaaaccgacaagcgtttgaggagtttatacatcgagttgaac
tgtaagtataagggcaaaaaggaaatcatatcatggttaaataggttagatctcaacaac
ggtgagagcttacatatcctcgacttggtaacccaaaactctaattttgaagctgcagct
gtaattcatgaacgcttactagagttcaacttagcagtcaaagacttactggaatgtatt
gaacagtgcctcaatgaaggagaaacaaacattaatgtcttatctgattatttgaggaag
gcaattgatgattgtaattccgctgctactgagaaaaagtcctgttggatattcttgatt
actttcctgattactttatacgggaactactctaaacatgatgacaagaaaaatttgtgc
aatgaattgttgcaagaagcatttttgggactggttagatccaaaagttcctctcaaaaa
aattcggggggcgagttttgggaaataatgtctttcgttcttgaacwccaggatgtcata
ctgatgaaagttcaagacttgaagcaattattattgaatgtcttcactacctataaattg
gagagatcgctctctgagttactccaaaaaataatagaagactcttcgcaggatcttgtt
caactttataggaaatttcttaatgaaggttggtctatacacaatgatgattgcgaagtc
tgtgggaaaataatatggggcgccggtctggacccactactttttctagtttgggaaaag
gtgcagcgccatcgggatatgattagtttagatctcgaaacgccgcttgtcatatttaaa
tgtcatcacggttttcaccagacttgtctcgaaaacctagcccaaaagcctaacgaatat
acttgtttgatttgtgatactaagtctgattcaaagtga
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