Saccharomyces eubayanus: DI49_0062
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Entry
DI49_0062 CDS
T08138
Name
(RefSeq) RFA1-like protein
KO
K07466
replication factor A1
Organism
seub
Saccharomyces eubayanus
Pathway
seub03030
DNA replication
seub03420
Nucleotide excision repair
seub03430
Mismatch repair
seub03440
Homologous recombination
seub03460
Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:
seub00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
DI49_0062
03420 Nucleotide excision repair
DI49_0062
03430 Mismatch repair
DI49_0062
03440 Homologous recombination
DI49_0062
03460 Fanconi anemia pathway
DI49_0062
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
seub03000
]
DI49_0062
03032 DNA replication proteins [BR:
seub03032
]
DI49_0062
03400 DNA repair and recombination proteins [BR:
seub03400
]
DI49_0062
Transcription factors [BR:
seub03000
]
Eukaryotic type
Zinc finger
Cys2His2 others
DI49_0062
DNA replication proteins [BR:
seub03032
]
Eukaryotic type
DNA Replication Elongation Factors
RPA (replication protein A)
DI49_0062
DNA repair and recombination proteins [BR:
seub03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
RPA (replication factor A)
DI49_0062
MMR (mismatch excision repair)
DI49_0062
DSBR (double strand breaks repair)
HR (homologous recombination)
DI49_0062
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Rep_fac-A_C
REPA_OB_2
tRNA_anti-codon
DUF223
Rep-A_N
CDC24_OB3
BRCA-2_OB1
Motif
Other DBs
NCBI-GeneID:
28929200
NCBI-ProteinID:
XP_018224110
LinkDB
All DBs
Position
I:complement(130191..132056)
Genome browser
AA seq
621 aa
AA seq
DB search
MSSIQLSKGDFHSIFTNKQRYDNPTGGVYQVYNTRKSDGANSNRKNLIMISDGVYHMKAL
LRNQAASKFQSMELQRGDMIRVIVAEPAIVRERKKYVLLVDDFELIQSRAEMVNQASTFL
DNYFSEHSNETLKDEDITDNGNAANQANAGNAGVPDMLHSNSNLNANDKKFSNESSGSQK
SKPIFAIEQLSPYQNVWTIKARVSYKGEIKTWHNQRGDGKLFNVNFLDTSGEIRATAFND
FATKFNEILQEGKVYYVSKAKLQPAKPQFTNLTHPYELNLDRDTVVEECFDESNVPKTHF
NFIKLDAIQNQEVNSNVDVLGIIQTINPHFELTSRAGKKFDRRDITIVDDSGFSISVGLW
NQQALDFNLPEGSVAAIKGVRVTDFGGKSLSMGFSSTLIPNPEIPEAYALKGWYDSKGRN
ANFITLKQEPGMGGQSAAGLTKFIAQRINIARAQAENLGRSEKGDFFSVKAAISFLKVDN
FAYPACSNENCNKKVLEQPDGTWRCEKCDTNNASPNWRYILTISIIDETNQLWLTLFDDQ
AKQLLGVDANGLMSLKEEDPNEFTKITQSIQMNEYDFRIRAREDTYNDQSRIRYTVANLH
SLNHKAEADYLADELSKALLA
NT seq
1866 nt
NT seq
+upstream
nt +downstream
nt
atgagcagcattcaactttcgaagggagacttccacagcatcttcaccaacaagcagagg
tacgataatcctaccggtggcgtttaccaggtttacaataccaggaagtcagatggtgcc
aatagcaacagaaagaacctgatcatgatttcagacggtgtctaccacatgaaggctctt
ttgagaaaccaggccgcgtccaaattccagtcgatggagctacaaaggggcgatatgatt
cgcgtgatagttgctgaacctgctattgtcagagaaaggaaaaagtacgttcttttggtt
gatgattttgagctaatccaatcccgtgcagaaatggtcaaccaggccagtacattttta
gataattacttctcggagcattcaaatgaaaccttaaaggatgaagatataaccgataac
ggcaatgccgctaaccaagcaaacgccggcaatgccggagttccagatatgctccattca
aactcaaacctaaatgctaacgacaaaaagttctccaacgaaagctctggctctcaaaaa
tccaaaccgatttttgccattgaacaattgtctccataccaaaacgtttggacgatcaag
gcaagagtttcctacaagggagaaatcaagacctggcacaatcaaagaggtgatgggaaa
ttgttcaatgtcaattttctagacacctctggggaaatcagagccactgctttcaacgac
ttcgctaccaagtttaacgaaattttgcaagagggcaaagtatactacgtttcaaaggca
aagctgcaaccagctaagcctcagtttaccaacttgactcatccttatgagctcaatttg
gatagagacaccgtcgtcgaagaatgttttgacgaaagcaatgttccaaagacccatttc
aacttcatcaaattagatgctatccaaaaccaagaggtaaactccaacgtggatgttctg
ggcattatccaaactatcaacccacatttcgaactaacttccagagctggaaaaaaattt
gatcgtcgcgatatcacaattgtcgacgattctgggttttctatctcagtcggtctgtgg
aatcagcaagcccttgacttcaacctccccgaaggttctgttgccgccatcaaaggtgtt
cgagtaacagattttggcggaaagtctttatctatggggttttcaagtactttaattccc
aatccagaaattcctgaagcgtatgctctaaaggggtggtacgattctaagggacgtaat
gccaacttcatcactttaaagcaagaacccgggatgggcggtcaatcagctgctggctta
acgaaatttattgctcaacgtataaacattgctagggctcaagccgaaaacttgggaaga
agtgaaaaaggtgattttttcagtgttaaggctgctattagtttcttgaaggtcgacaat
tttgcatatcctgcctgttccaatgaaaactgtaacaagaaagtcttggaacaacctgat
ggtacttggagatgtgagaaatgtgataccaacaatgcaagccctaattggaggtacata
ttgacaatctcaatcattgacgaaactaaccaactatggctaactttgttcgatgaccaa
gctaaacaattgcttggagttgacgctaatggtttaatgtctttgaaggaggaggatccc
aatgaatttacgaaaattacccaaagcatccaaatgaacgaatatgactttaggatcaga
gcacgcgaagatacatacaacgatcaaagcagaatcagatatactgttgccaacctacac
agtttgaatcacaaggctgaagctgattatttggcagacgagttatccaaggctttgttg
gcttaa
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