Saccharomyces eubayanus: DI49_0063
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Entry
DI49_0063 CDS
T08138
Name
(RefSeq) SEN34-like protein
KO
K15323
tRNA-splicing endonuclease subunit Sen34 [EC:
4.6.1.16
]
Organism
seub
Saccharomyces eubayanus
Brite
KEGG Orthology (KO) [BR:
seub00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
seub03016
]
DI49_0063
Enzymes [BR:
seub01000
]
4. Lyases
4.6 Phosphorus-oxygen lyases
4.6.1 Phosphorus-oxygen lyases (only sub-subclass identified to date)
4.6.1.16 tRNA-intron lyase
DI49_0063
Transfer RNA biogenesis [BR:
seub03016
]
Eukaryotic type
tRNA spricing factors
tRNA splicing endonuclease complex
DI49_0063
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TSEN34_N
tRNA_int_endo
DUF5928
DUF5505
Motif
Other DBs
NCBI-GeneID:
28929201
NCBI-ProteinID:
XP_018224111
LinkDB
All DBs
Position
I:<132336..>133238
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AA seq
300 aa
AA seq
DB search
MTEEDVRRVAITIYAKKCAEAEEVLMSPLVFDMHDIQLLRKYGICGVLSGTLPTAAQQNV
FLSVPLRLMLEDVLWLHQNNLADVKIIRQGGDEIIAGITPERGAKLAKLVEDRLTKSFDY
QTKFKKDQHIAKLKKIGIINDETSAEELQRLDKSNNNDQLIESSLFIDIADSSSILKDDS
IALNSLSCDDIRNLLFKQYERSEKMQTYFLYKALRDQGYVLSPGGRFGGKFIAYPGDPLR
FHSHLTIQEAIDYRSEPIDLISMISGARLGTTVKKLWVIGGVEEETGSTHFFSVEWAGFG
NT seq
903 nt
NT seq
+upstream
nt +downstream
nt
atgactgaggaagatgttagacgcgtagcgatcactatatatgcgaaaaaatgtgcagaa
gctgaggaggtgctgatgtcaccgctagtattcgacatgcatgatatccagcttctgcgg
aagtatggtatatgtggtgtgctgtctggaactttgcccactgctgcacaacagaatgtg
ttcttgtcggtgcctctgaggctcatgctggaagacgtgctgtggcttcaccaaaacaat
ctcgccgatgtgaagataataagacaagggggcgatgagataatagcaggaataacgcca
gaaaggggtgccaaactagccaaactggtggaagaccgcttaactaagtcgttcgattat
cagacgaagtttaagaaggaccaacacattgcaaaattaaagaaaatcggtattatcaac
gacgagacttccgcagaggaactacagcggttggacaaatctaacaacaacgaccagctg
atcgaatcttctttatttattgacattgccgacagttcttctatcctaaaggacgatagt
attgctttgaatagcctatcttgtgatgatattcgtaatttgttgtttaagcaatacgag
cggtcagaaaagatgcagacatactttttgtacaaggcattgagagatcaaggatacgtc
ttgtctccaggtggtcgttttggtgggaaattcatagcatatcctggtgatcccctgcgt
ttccattcgcatttgactatccaagaggcgatcgattatcgtagcgagccgatcgacttg
atatctatgataagcggtgcaagactaggcactactgttaagaaactttgggtcataggg
ggtgttgaggaagagacgggaagcacacatttcttctcggtggaatgggcaggtttcggt
taa
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