Saccharomyces eubayanus: DI49_0277
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Entry
DI49_0277 CDS
T08138
Name
(RefSeq) VPS41-like protein
KO
K20184
vacuolar protein sorting-associated protein 41
Organism
seub
Saccharomyces eubayanus
Pathway
seub04138
Autophagy - yeast
seub04148
Efferocytosis
Brite
KEGG Orthology (KO) [BR:
seub00001
]
09140 Cellular Processes
09141 Transport and catabolism
04138 Autophagy - yeast
DI49_0277
04148 Efferocytosis
DI49_0277
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
seub04131
]
DI49_0277
Membrane trafficking [BR:
seub04131
]
Endosome - Lysosome transport
Tethering complex
Hops complex
DI49_0277
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Beta-prop_Vps41
TPR_Vps41
Clathrin
WD40
WD40_CDC20-Fz
Vps39_1
WD40_WDHD1_1st
Beta-prop_EML_2
Beta-prop_IFT122_1st
Motif
Other DBs
NCBI-GeneID:
28929415
NCBI-ProteinID:
XP_018223650
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Position
II:409798..412776
Genome browser
AA seq
992 aa
AA seq
DB search
MTVNNTQKDSNANQQTGSSIIDENDSVSEKDNDDNTVNTTEVTKPNESTGYLPQPSSEAG
LQIDKSVIAVSDMEAEEDGKEEDDKEEEAEDDDDDDDDEPPLLKYTRINQLPKNFFQRDS
ISSCLFGDHFFAFGTHSGILHLTTCTFEPIKTIKCHRSSILCINTDGKHFATGSIDGTVI
IGSIDDPQNITQFDFKRPINSVALHSNYQASKMFVSGGMAGDVVLSQRNWLGNRIDIILN
KKKKKKIKKDDQQPDMKGPIMGIYTMGDLILWMDDDGVTFCDIPTRSELLNISFPTQIFN
IQNVRPDLFRPHVHFLESDRIIIGWGSNIWLFKVSFAKDSHSNKSSDSTSQSNNMSHFNP
TTNFGSLLSSAASSFRGTPDKKVELERHFTVSMLIAGLASFKDDQLLCLGFDLDIQDCTD
DNGNSNSNLGNQSKNLLFKGKAPELKIVDLFNGDEIYNDEVIMKNYEKLSLNDYHLGKHI
DETTPEYYLISSNDAIRVQELSLRDHFDWFIERKQFYKAWKIGKYVIGSDERFSIGLKFL
NTLVTKKDWSTLIDHLNIIFEETLSSLDSNSYEASNKVLLQWADIIEVLIKSGKIVEIAP
LIPEKPVLRKSVYDDVLHHFLVNGMINKFHEYIIKWDLKLFSVAHFEEELETKIETANEP
TVLHDEVDSDITYRTELVLLYLKENKYTKAIPHLLKAKDLRALAIIKSQNLLPQYLDQIV
DIILLPYKGKVSHIPKLSIFEIQTIFNKPIDLLFENRHTIPIDRIYKIFEHDCPKDFDKI
LFSYLIKFLDTDDSFMINPYENQLIELYSEYDPQSLLPFLQKHSNYNVETAIEVCSSKPG
LYNELIYLWGKIGETKKALSLIIDELQNPQLAIDFVRNWGDSDLWEFMINYSLDKPNFTR
AILTCSDETSEIYLKVIRGMSNDLKIDNLQDIIRHIVQENSLSLKVRDNILVIINDETNK
FANEFLKIRSQGKLFQVDESDGEINDDLYNVF
NT seq
2979 nt
NT seq
+upstream
nt +downstream
nt
atgactgtaaataacacccagaaagattccaatgcgaatcaacaaacaggcagtagcata
attgacgaaaacgattcagtttctgaaaaggacaacgatgataatactgtaaacaccacg
gaggtaactaaaccaaatgagagcactggttacttaccacaaccaagtagtgaagcaggc
ctccaaatagataaaagtgtaatagccgtaagcgatatggaagccgaagaagatggtaaa
gaagaagatgataaagaagaagaggctgaagacgatgatgatgatgacgatgatgaacca
cctttgctaaagtacacaagaatcaaccaactcccgaaaaatttctttcagagagactca
atatcttcatgtttatttggtgatcatttttttgcatttggtacgcattcaggtatttta
catctgactacatgcacattcgaacccatcaagacaataaaatgccatagatcttcaata
ctttgtatcaatactgatggtaaacattttgctacaggatctattgatggcaccgttatc
attggatcaattgatgatccgcagaatataacacagtttgactttaaaaggcccataaat
tcagtagcattgcactcaaattatcaagcatcaaagatgttcgtttccggtggaatggct
ggcgatgtggtattatcccaaagaaactggctaggtaataggattgatattatcctaaat
aaaaagaaaaagaaaaagatcaagaaagacgatcaacagccggatatgaagggccctatt
atgggaatatacactatgggagaccttattttatggatggatgatgacggcgttacgttt
tgcgatattccaactagatctgagcttttgaacatatcattccctacacagattttcaac
attcagaatgtcagaccggatcttttcagacctcacgtccatttcttagagagtgatcgg
attattattggatggggatccaacatttggcttttcaaagtttcctttgctaaggattca
cactcgaacaaatctagtgactctacatcgcaaagtaataatatgagtcatttcaaccct
actactaatttcggctctttactgtcaagtgccgcctcaagtttcagaggtacgccagat
aagaaagtagagttagaacgccattttacggtatcgatgctgattgctgggttagcatca
tttaaagatgatcagttattatgtctgggatttgatctagacatccaagattgcactgat
gacaatggaaatagcaactccaatctaggtaaccagtcaaaaaatttactgttcaaggga
aaagccccggaactaaaaattgtcgaccttttcaatggtgatgaaatatacaacgatgaa
gtcataatgaaaaactacgagaaattatcattaaatgactatcacctgggtaaacatata
gacgaaaccacgccagaatactatttaataagttcaaatgatgctatcagagttcaagaa
ctttcattgagagaccactttgattggttcatagagaggaagcaattttacaaagcctgg
aagattggtaaatacgtaattggatcagacgaaagatttagtataggtttgaaattcctt
aacactttggtaaccaagaaggattggagtacactgatcgatcatttaaacattatcttc
gaagaaactttaagctcattagattcgaactcatatgaagcttccaataaagtgttgcta
caatgggcagatataatagaagtcttaatcaaatcaggaaaaatagtagaaattgcaccc
ttaatccctgagaaacctgttttaagaaagtcggtatatgacgatgtattgcatcatttt
ttggtaaatggaatgattaataaatttcatgaatatattatcaaatgggatctgaaactc
ttctctgttgcacattttgaagaagagctagaaacgaagatagagaccgccaatgaaccc
acagtcttacacgatgaagtggattccgatattacttatagaacagaattagtcctttta
tatctaaaagagaacaaatatacgaaggcaataccacatttattgaaagctaaggatttg
agggccttagctattataaaatcacaaaatttgttgccgcagtatctagatcagatagta
gatatcattctcttgccttataagggcaaggtttctcatatccctaaactatcaatattc
gaaattcaaactatcttcaacaaacctattgatttattatttgagaatagacataccata
cccattgatagaatatacaaaatatttgaacatgactgtccaaaggactttgacaagatt
ctattctcctatctaataaaatttttagatacagacgactcctttatgataaatccttac
gaaaatcagcttattgaactttattctgaatacgatccacagagtctcttgcccttttta
caaaagcacagtaattataatgtagagactgccatcgaagtttgttcctccaaacctggt
ctgtacaacgaattgatttacttgtgggggaaaatcggtgaaacaaaaaaagctttatca
ttaattatcgacgagcttcaaaacccacaattagccattgattttgttaggaactggggt
gattcagatctttgggaatttatgattaactatagtctagataaaccaaattttacaagg
gcaattttaacatgttctgatgaaacaagtgaaatatatttaaaagtaatcagaggaatg
tcgaatgatttaaaaattgacaatctgcaggatatcatcaggcatattgtccaagaaaat
tcgttgagcttaaaagtacgcgataatatattggtgatcattaatgatgaaaccaataag
ttcgccaatgaattcttgaagattagaagtcaaggcaaactatttcaagttgacgaaagt
gacggtgaaatcaatgatgatctatataacgtgttttga
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