KEGG   Saccharomyces eubayanus: DI49_0292
Entry
DI49_0292         CDS       T08138                                 
Name
(RefSeq) MSH6-like protein
  KO
K08737  DNA mismatch repair protein MSH6
Organism
seub  Saccharomyces eubayanus
Pathway
seub03430  Mismatch repair
Brite
KEGG Orthology (KO) [BR:seub00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03430 Mismatch repair
    DI49_0292
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:seub03400]
    DI49_0292
DNA repair and recombination proteins [BR:seub03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   MMR (mismatch excision repair)
    Mismatch and loop recognition factors
     DI49_0292
SSDB
Motif
Pfam: MutS_V MutS_III MutS_I MutS_IV MutS_II AAA_27 AAA_29
Other DBs
NCBI-GeneID: 28929430
NCBI-ProteinID: XP_018223664
LinkDB
Position
II:complement(445013..448750)
AA seq 1245 aa
MAPATPKASKTAQFKNGSTSSQKKMKQSSLLSFFSKQASSATPTKGAPQAIPSSSQNPAT
SKTTEKSEDKKSKQLFVDIDDNNDMTMAEETPSSTSHSQEFQSDTLLNTNTTEVKNAIAD
DDSSSSSQTRRNHKRTINYAESDEEDSSTLSTNKRKRSKVIDSESDEDEYVPDKNDVEAE
DDEDNDIIEAKEDIKDELADNDGGDDDDDDLLSLVESSSKRKSSNTSHSSSPFARNTSHS
ISKNASRPNQGQRKSYTPPHTQKSMVSKSSKFNKQNEERYQWLVDERDAQRRSKSDPEYD
PRTLYIPSSAWNKFTPFEKQYWEIKSKMWDCIVFFKKGKFFELYEKDALLANALFDLKIA
GGGRANMQLAGIPEMSFEYWAAQFIQMGYKVAKVDQRESMLAKEMREGSKGIVKRELQCI
LTSGTLTDGDMLHSDLATYCLAIREESGNYYNPTELDTSTTAKKLNTKIFGVAFIDTATG
ELQMLEFEDDSECTKLDTLMSQVRPMEVVMERNNLSTLANKIVKFNSAPNAIFNDVKAGE
EFYDFDKTYSEIISSGYFSTEEDWPEILKTYHDMGKKVGFSAFGGLLYYLKWLKLDENLI
SMKNIKEYNFVKSQNSMVLDGITLQNLEIFSNSFDGSDKGTLFKLFNRAITPMGKRMMKK
WLMHPLLHKNDIEKRLDSVDSLLQDITLREELEMTFSKLPDLERMLARIHSRTIKVKDFE
KVITAFETIVQLQNSLQNNNLKGDVSDYISSFPKGLVEGVENWTNAFERQRAINENIIVP
QRGFDVEFDKSLDKIQELKDELMEILMRYRKQFKCSNIQYKDSGKEIYTVEIPVSATKSV
PSNWVQMAANKTYKRYYSDEVRTLARSMAEAKELHKTLEEDIKNRLCQKFDVHYNSIWMP
TIQAISNIDCLLSITRTSESLGAPSCRPIIVDEFDPKTNAKMNGYLNFKSLRHPCFNLGA
TTARDFIPNDVELGKDQPQLGLLTGANAAGKSTVLRMTCIAVIMAQMGCYVPCESAVLTP
MDRIMTRLGANDNIMQGKSTFFVELAETKKILDMATNRSLLVVDELGRGGSSSDGFAIAE
SVLHHVATHIQSLGFFATHYGTLALSFKHHPQVRPLKMSILVDEGTRNVTFLYKMVEGQS
EGSFGMHVASMCGISKSIIDNAQIAADNLEHTSRLVKERDLAVNNLKGEVLSLSGGLQSD
FVRIVYGDGLKNSKLGSGEGVLNYDWNIKKNVLKNLFSMIDGLDS
NT seq 3738 nt   +upstreamnt  +downstreamnt
atggccccagctacccctaaagcttctaagactgcccagtttaagaatggctccacgtcg
tcccaaaaaaaaatgaaacagtcaagtttactgtcatttttctccaaacaagcatcttct
gcgacgcccaccaaaggagcacctcaagctattccatcgagttcacaaaacccagctact
agtaagacaacggagaagtcagaagataaaaagtccaaacagctttttgtagatatagat
gacaacaatgatatgacaatggctgaagaaacgccgtcaagtaccagtcattctcaagag
ttccagtcagataccttactaaacactaatacaactgaagttaagaacgccattgcagat
gatgattcgtcatcctcttcacaaactcgaagaaaccataaaagaacgatcaattatgct
gaaagtgatgaagaagactctagcactttgtctaccaacaaacgaaagaggagtaaagtg
attgacagcgaaagtgatgaagacgaatatgtacccgataaaaatgatgtggaagctgaa
gatgatgaagataacgatattatagaagccaaagaagacatcaaagacgaattggcagat
aatgatggtggagatgatgacgatgatgatctgttgtccttagtggagtcgtcttcaaag
agaaagtcatcaaatacttcccattcttcatcaccttttgcaagaaacacatcacatagc
atttcaaagaatgcgagtagaccaaatcaaggccaaagaaaatcttacactcctcctcac
acccaaaaatcaatggtttctaaatccagcaaattcaataaacaaaatgaagagagatat
caatggctagttgatgaacgtgacgcccagcgccgttccaaaagtgatccggagtatgat
ccaagaacactgtatatcccatcctctgcatggaacaaatttacaccgttcgaaaaacaa
tactgggaaattaaatccaaaatgtgggattgcattgttttctttaaaaagggtaagttc
tttgaactttatgagaaagatgccttattggctaatgccttatttgatttgaagattgca
ggtggcggacgtgctaatatgcaattggccggtatcccagaaatgtcgttcgaatactgg
gcagctcagttcattcagatggggtataaagttgccaaggtggaccaaagagaatcaatg
cttgctaaagaaatgagagaaggttcgaagggtatcgttaaaagagaactacaatgtata
ctaacctcaggtactttaactgatggcgatatgttacattcggacttagcaacctattgt
ctcgctataagagaagagtccggtaattactataacccaaccgaattagatacgtcgacc
acggctaaaaagttgaacacgaaaatattcggtgtggcctttattgatactgccactggt
gaacttcaaatgttggagtttgaagatgatagtgagtgcacgaaactagacacgttgatg
tctcaagtgagacctatggaagttgttatggagaggaataatttgagcacactggctaac
aaaatcgtcaagtttaattctgcccccaatgcaattttcaatgacgtaaaagccggtgaa
gaattctatgactttgataaaacttattctgaaataatatcatctggatacttttctaca
gaagaagattggccagaaattttaaagacgtaccatgatatggggaagaaagttggtttt
agtgcatttggtggattgttgtactatttgaaatggctaaagttagatgaaaatctaatt
tcgatgaaaaatatcaaagagtacaattttgttaaatcgcaaaactccatggttttggat
ggtatcactttacaaaacttagagattttttccaattcgtttgatggttccgataaggga
acactgttcaaactatttaacagggccattactccaatgggtaagagaatgatgaaaaaa
tggttaatgcatccactattgcataagaacgatattgaaaagagactcgacagcgttgac
tctttattacaagatatcactctaagagaagaacttgaaatgacgttttctaagctgcct
gatctagagagaatgctggcccgtatccacagccgaacaattaaagtgaaagatttcgaa
aaagtcattacagcatttgaaacgattgttcaattgcaaaactctctacaaaataataat
ttaaagggagatgtttcggattacatatcatctttccccaaggggcttgtggaaggtgtt
gaaaactggacaaacgcgtttgaaagacaaagagcaatcaacgaaaatattattgtccca
cagaggggatttgatgtggaattcgataaatcactggataaaatacaggagttgaaagac
gaattgatggaaatattaatgaggtacagaaagcagttcaaatgttcgaacatacaatat
aaagattctggtaaggaaatttacactgtcgaaattccagtttctgcaaccaaaagcgtc
ccatcaaattgggttcaaatggcagcaaacaaaacctataaaagatattactctgatgaa
gtaagaactttagcgagatcgatggcagaggccaaggaattacacaagactctagaagaa
gatataaagaataggctatgtcaaaaattcgacgtacactataattcgatttggatgccc
actatacaagctatctctaatatagactgtctgttgtctataacaagaacatccgaatct
ttaggcgctccctcttgtaggccgattattgtggatgaattcgatccaaaaacaaatgcc
aaaatgaacggttacttgaatttcaagtcattgaggcatccatgttttaatctcggtgct
accaccgcaagagactttatccctaatgacgttgagttaggtaaggatcaacctcaattg
ggattgttgacaggtgccaatgcggcaggtaaatcaacagtattaagaatgacatgtatc
gccgtaattatggcacaaatgggctgctacgtaccctgtgaatctgctgttttgacgcca
atggatagaatcatgacgcgtttaggggccaatgataatataatgcaaggtaaatccaca
tttttcgtggagttggctgaaacgaaaaaaatactagatatggcaacaaacagatcgttg
ttggttgttgacgagctggggagaggcggttcatcaagcgatgggtttgccattgcagaa
agtgtgctacaccacgtggcgacacatattcaaagtttaggatttttcgccacacattac
ggtacactggcactaagttttaaacaccatccccaagtaaggccattgaaaatgagcatt
ctggtggatgaaggaaccaggaacgtgacttttctgtacaagatggtcgaaggccaaagt
gaaggttcattcggtatgcatgtggcgtcaatgtgtgggatttcaaagagtattatcgac
aatgcgcagattgcagcagacaatttggagcatacatctagattagtcaaagaacgtgat
ttggcagtcaacaatttaaaaggagaagttctctctttatctggtggcttacagagcgat
ttcgttcggattgtgtacggagatgggttgaaaaattcaaaattgggttccggagaaggc
gttttgaattatgattggaacattaaaaaaaatgtcttgaaaaatctcttcagtatgatc
gatggtttggattcttag

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