KEGG   Saccharomyces eubayanus: DI49_0383
Entry
DI49_0383         CDS       T08138                                 
Name
(RefSeq) REF2-like protein
  KO
K15543  RNA end formation protein 2
Organism
seub  Saccharomyces eubayanus
Pathway
seub03015  mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:seub00001]
 09120 Genetic Information Processing
  09122 Translation
   03015 mRNA surveillance pathway
    DI49_0383
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:seub03019]
    DI49_0383
Messenger RNA biogenesis [BR:seub03019]
 Eukaryotic type
  mRNA processing factors
   3' end processing
    Cleavage and polyadenylation specificity factor (CPSF) complex
     DI49_0383
SSDB
Motif
Pfam: DUF6626
Other DBs
NCBI-GeneID: 28929521
NCBI-ProteinID: XP_018223752
LinkDB
Position
II:645550..647190
AA seq 546 aa
MSAPVPQLVNISHALQASTIQQIRLDMVDFNKDCKLSSVQLARIDKYTDSLQAALNQFTR
DNLHIERKDEDVTAADVQLYSGLKSMYLDYLNQLIKLKQDKQHHSAPPIANDVSLDFFVN
QLPKFPIEERKNYIDNLILNKNCHNQLSKMDGLVDAVINLCVLDNSVSENVRSYMKLLDT
LGFQKGPNSTNAKAKLKKKLTSSKAKVKDSEKEKEKEMDKDKDKDKDKLKAKVRTKLKPS
PLFNNDGNTSYSSSLPSASGSSAKKLKSGLFNKSEAKSSTDAVTASSSKKKLSFSKYLNK
DDTDTTKSGTKRSLELDFKVNPEVPTTSTNIASSPSSSSSLTTTGGYPVSSEEPLKKKIK
QSVQDPNIRSILRNGKSKKTRVSSIKFLDDPRLIKVYGDDLPNHGLQVSPVQLKKILKPF
KEGEPKEVILFEDMSIKLQPLELKFLKSTDNEDYMDISETKGGPIHCETRTPLIYRNNFN
QFSSDLNKRPPREPIDFDLNGNTNSNPIIAKAFGKNSLLLRKDRGGLPYKHVPIVKRNKY
PPRPVR
NT seq 1641 nt   +upstreamnt  +downstreamnt
atgtcagcacctgttcctcaattagtaaatatttctcatgccttgcaagcttccactatc
cagcaaattcgtttggatatggtagattttaataaagattgcaaactatcttcagttcaa
ttggcaagaattgacaaatataccgactccttgcaagcagctttaaatcaattcaccaga
gacaacttgcacatcgaacggaaagatgaggatgtgactgctgcagatgttcaattatat
tccggcttaaaatcaatgtatttagactatttgaaccaattaataaaactaaaacaagac
aaacaacaccactccgcaccccccattgccaatgatgtctcgctagacttcttcgttaac
caactacccaaatttcctatcgaggaaagaaaaaactacatcgataacttaatcctgaat
aaaaattgtcataatcaattatctaaaatggatgggttggtggatgctgttattaaccta
tgtgtcttggataattccgttagtgaaaacgtacgatcttatatgaaactattggataca
ctgggtttccaaaagggtccaaacagcactaatgcaaaggcaaagctaaaaaagaaacta
accagttccaaagcaaaagtaaaagattcagaaaaggaaaaggaaaaggaaatggacaag
gacaaggataaggacaaggataagttgaaagctaaagtaagaacaaaactaaaaccttct
cccctatttaataatgacggtaatacttcatattcatcatcgctaccttctgcatctggg
tcttcggcaaagaaactgaagtcaggcttattcaataaaagtgaagccaaatcttcgacg
gacgctgtaaccgcttcttcttctaagaaaaaactatcattttctaaatatctgaataaa
gatgacacagataccactaaatctgggaccaaacggtcactagagttagatttcaaagtt
aatcccgaagtgccaacaacatctaccaatattgcatcatcgccgtcatcttcatcgtca
ttaaccacaacgggaggatatcctgtttcttctgaagaacccttgaagaagaaaataaaa
cagtcagtacaagaccccaatataaggtcaattctgagaaatggtaaatcaaagaaaaca
cgtgtaagtagtattaaatttttggatgaccctcgactaataaaagtttatggtgatgat
ctaccgaatcacgggctacaagtttcgccagtacaactgaaaaaaatcctaaagccattc
aaagaaggcgaaccaaaggaagttatactgtttgaagatatgtcaatcaagctacagcct
ttagagttgaagtttttgaaaagcacagataatgaagactacatggatatatccgaaact
aaaggtggaccaattcactgtgaaaccagaactccattgatctatagaaacaacttcaac
caattcagttcagatttaaataagagaccgccaagagagccaatagattttgatttgaat
ggaaacacaaattcaaacccgatcattgcaaaggcatttggtaaaaatagtctattatta
aggaaggacagaggcggtttaccatacaagcatgtccccattgtaaaaagaaataagtac
cctccaagacctgtacgctaa

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