Saccharomyces eubayanus: DI49_0383
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Entry
DI49_0383 CDS
T08138
Name
(RefSeq) REF2-like protein
KO
K15543
RNA end formation protein 2
Organism
seub
Saccharomyces eubayanus
Pathway
seub03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
seub00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
DI49_0383
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
seub03019
]
DI49_0383
Messenger RNA biogenesis [BR:
seub03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Cleavage and polyadenylation specificity factor (CPSF) complex
DI49_0383
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DUF6626
Motif
Other DBs
NCBI-GeneID:
28929521
NCBI-ProteinID:
XP_018223752
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Position
II:645550..647190
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AA seq
546 aa
AA seq
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MSAPVPQLVNISHALQASTIQQIRLDMVDFNKDCKLSSVQLARIDKYTDSLQAALNQFTR
DNLHIERKDEDVTAADVQLYSGLKSMYLDYLNQLIKLKQDKQHHSAPPIANDVSLDFFVN
QLPKFPIEERKNYIDNLILNKNCHNQLSKMDGLVDAVINLCVLDNSVSENVRSYMKLLDT
LGFQKGPNSTNAKAKLKKKLTSSKAKVKDSEKEKEKEMDKDKDKDKDKLKAKVRTKLKPS
PLFNNDGNTSYSSSLPSASGSSAKKLKSGLFNKSEAKSSTDAVTASSSKKKLSFSKYLNK
DDTDTTKSGTKRSLELDFKVNPEVPTTSTNIASSPSSSSSLTTTGGYPVSSEEPLKKKIK
QSVQDPNIRSILRNGKSKKTRVSSIKFLDDPRLIKVYGDDLPNHGLQVSPVQLKKILKPF
KEGEPKEVILFEDMSIKLQPLELKFLKSTDNEDYMDISETKGGPIHCETRTPLIYRNNFN
QFSSDLNKRPPREPIDFDLNGNTNSNPIIAKAFGKNSLLLRKDRGGLPYKHVPIVKRNKY
PPRPVR
NT seq
1641 nt
NT seq
+upstream
nt +downstream
nt
atgtcagcacctgttcctcaattagtaaatatttctcatgccttgcaagcttccactatc
cagcaaattcgtttggatatggtagattttaataaagattgcaaactatcttcagttcaa
ttggcaagaattgacaaatataccgactccttgcaagcagctttaaatcaattcaccaga
gacaacttgcacatcgaacggaaagatgaggatgtgactgctgcagatgttcaattatat
tccggcttaaaatcaatgtatttagactatttgaaccaattaataaaactaaaacaagac
aaacaacaccactccgcaccccccattgccaatgatgtctcgctagacttcttcgttaac
caactacccaaatttcctatcgaggaaagaaaaaactacatcgataacttaatcctgaat
aaaaattgtcataatcaattatctaaaatggatgggttggtggatgctgttattaaccta
tgtgtcttggataattccgttagtgaaaacgtacgatcttatatgaaactattggataca
ctgggtttccaaaagggtccaaacagcactaatgcaaaggcaaagctaaaaaagaaacta
accagttccaaagcaaaagtaaaagattcagaaaaggaaaaggaaaaggaaatggacaag
gacaaggataaggacaaggataagttgaaagctaaagtaagaacaaaactaaaaccttct
cccctatttaataatgacggtaatacttcatattcatcatcgctaccttctgcatctggg
tcttcggcaaagaaactgaagtcaggcttattcaataaaagtgaagccaaatcttcgacg
gacgctgtaaccgcttcttcttctaagaaaaaactatcattttctaaatatctgaataaa
gatgacacagataccactaaatctgggaccaaacggtcactagagttagatttcaaagtt
aatcccgaagtgccaacaacatctaccaatattgcatcatcgccgtcatcttcatcgtca
ttaaccacaacgggaggatatcctgtttcttctgaagaacccttgaagaagaaaataaaa
cagtcagtacaagaccccaatataaggtcaattctgagaaatggtaaatcaaagaaaaca
cgtgtaagtagtattaaatttttggatgaccctcgactaataaaagtttatggtgatgat
ctaccgaatcacgggctacaagtttcgccagtacaactgaaaaaaatcctaaagccattc
aaagaaggcgaaccaaaggaagttatactgtttgaagatatgtcaatcaagctacagcct
ttagagttgaagtttttgaaaagcacagataatgaagactacatggatatatccgaaact
aaaggtggaccaattcactgtgaaaccagaactccattgatctatagaaacaacttcaac
caattcagttcagatttaaataagagaccgccaagagagccaatagattttgatttgaat
ggaaacacaaattcaaacccgatcattgcaaaggcatttggtaaaaatagtctattatta
aggaaggacagaggcggtttaccatacaagcatgtccccattgtaaaaagaaataagtac
cctccaagacctgtacgctaa
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