Saccharomyces eubayanus: DI49_0410
Help
Entry
DI49_0410 CDS
T08138
Name
(RefSeq) PCF11-like protein
KO
K14400
pre-mRNA cleavage complex 2 protein Pcf11
Organism
seub
Saccharomyces eubayanus
Pathway
seub03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
seub00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
DI49_0410
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
seub03021
]
DI49_0410
03019 Messenger RNA biogenesis [BR:
seub03019
]
DI49_0410
Transcription machinery [BR:
seub03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Transcription termination factor
DI49_0410
Messenger RNA biogenesis [BR:
seub03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Pre-mRNA cleavage factor IIm (CFIIm)
DI49_0410
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Pfc11_Rna14-15-ID
Pcf11_C
Pfc11_Clp1_ID
CID
zf_PCFS4
VHS
zf_UBZ
Zn_Ribbon_TF
Motif
Other DBs
NCBI-GeneID:
28929548
NCBI-ProteinID:
XP_018223778
LinkDB
All DBs
Position
II:complement(707532..709385)
Genome browser
AA seq
617 aa
AA seq
DB search
MDHDTEVIIKDFNSILEELTFNSRPIITTLTKLAEENISCAQYFVDCIENRIEKCMPKQK
LYAFYALDSICKNVGSPYTIYFSRNLFNLYRKTYLLVDNTTRTKLINMFKLWLNPNDTGM
PLFEGSALEKIEQFLIKASALHQKNLQAMLPTPTVPLLLRDIDKLTSLTSDRLKNQPNDE
KLKMKLLVLSQLKQELKREKLTLNALKQVQMQLRQVFSQDQQVLQERMRYHEFQQQQQQQ
QQQYHETKETQGTSPQNSNAAIPLFGNNPDIMNHQGTLSSSLFGNISGVESFQDIEKKKN
LSKIKNLYESLQSEGLIYTPPKESIVTLYTKLNGHSSYSLDSREKQLMKNLPKIPLLNDI
LSDCKAYFATVNVDILNNPTLQLSEQTLLQENPIVQNSLIHLLYRSKPNKCSVCGKRFGN
SETEKQLQNEHLDWHFRINTRIKGSQNTANTGISNSNSNTTTTRKNIQSRNWYLSDSQWV
AFKDEEITSTQHKVDYTDPNIMENSNNIDNSNSYANEINEKSAKDTLGNRKDNEVKIKEK
YVVVPETSQDMVFKCPICKETVTGVYDEESGEWIWKNTIEVDDKYFHSTCYHETSESLNK
FDEGSVDLDDLKKLITK
NT seq
1854 nt
NT seq
+upstream
nt +downstream
nt
atggatcacgacactgaagtcataatcaaggatttcaatagtattcttgaagagctaact
ttcaattcgagaccgatcattaccactcttacgaagttagcggaagaaaatatatcatgt
gcccaatattttgttgattgtatagagaataggatcgaaaaatgtatgcctaaacagaaa
ctatacgccttttacgccttagattccatttgtaaaaacgttggtagtccatacacaatc
tacttcagtagaaatttgtttaatctatacagaaaaacatatctcttggtggataacact
acaagaacgaagctcatcaacatgttcaagctttggctaaacccaaacgacaccggcatg
cccctgtttgagggctctgctctagagaagattgaacaatttctaataaaggccagcgct
ttgcaccaaaaaaatttacaagcaatgttaccaacccccactgttcctcttctactaaga
gatatcgacaagttaacatctttgaccagcgacagattaaagaaccagccaaacgatgaa
aaactgaaaatgaaacttttggtcttatctcaattgaagcaagaactgaaaagagagaag
ctaactctcaatgcgttaaagcaggttcaaatgcaactgagacaggttttttcgcaagac
caacaagtattacaagaaagaatgaggtatcacgaatttcagcagcaacagcaacagcaa
cagcaacaatatcacgaaactaaggaaacccaaggaacctctcctcaaaattccaatgcg
gctatcccactatttggtaacaaccctgatataatgaaccatcagggcactttatcttca
tctctctttggaaatatttccggtgttgaatcttttcaagacatcgagaaaaaaaaaaac
ctaagtaaaatcaaaaacctttatgaatctttgcaatctgaggggttaatatatactcca
ccaaaggaatccattgtaacgctttatacaaagctaaacggccattcaagctattctttg
gactccagggaaaaacaattaatgaaaaacctaccaaagataccgctactaaatgacatt
ctctctgactgtaaagcctatttcgccacagtcaacgttgatatcttgaataacccaacc
ttacaactatctgaacaaaccttacttcaagaaaacccaatcgttcaaaatagtctcatt
catttattgtacagatcgaaaccaaataaatgtagtgtgtgtggtaagagattcggtaat
tcagaaactgaaaaacaactacaaaacgagcatttggactggcatttcagaataaataca
agaattaaaggttctcaaaatacagcaaacacaggtataagcaactcaaactcaaatacc
actactacaaggaaaaatatacaatcaagaaactggtatttgagcgattctcaatgggta
gctttcaaagatgaagaaatcacctctacacagcataaagttgactacactgatcccaat
attatggaaaacagtaataacatcgataattcaaatagctacgctaatgaaattaatgaa
aagtctgcaaaggacactttaggaaatcgtaaagataatgaagtaaaaataaaggaaaaa
tatgttgtcgtaccagaaacttcacaggatatggttttcaagtgtccgatttgtaaagaa
actgtcaccggtgtttatgatgaggaatcgggtgaatggatctggaaaaatacgattgag
gttgatgataaatattttcattctacttgctatcatgaaacctccgaaagtttaaataaa
tttgatgaaggctcagttgatttagacgatctaaaaaaattaatcactaaataa
DBGET
integrated database retrieval system
