KEGG   Saccharomyces eubayanus: DI49_0470
Entry
DI49_0470         CDS       T08138                                 
Name
(RefSeq) SSD1-like protein
  KO
K18748  protein SSD1
Organism
seub  Saccharomyces eubayanus
Brite
KEGG Orthology (KO) [BR:seub00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:seub03019]
    DI49_0470
Messenger RNA biogenesis [BR:seub03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Factors involved in mRNA localization
    Other mRNA localization factors
     DI49_0470
SSDB
Motif
Pfam: RNB OB_Dis3 Dis3l2_C_term CSD2 OB_RNB Rrp44_CSD1 HisG_C Rrp44_S1
Other DBs
NCBI-GeneID: 28929608
NCBI-ProteinID: XP_018223835
LinkDB
Position
II:complement(817727..821491)
AA seq 1254 aa
MSKNSNMNNNRSQDPNNMFVQTTGGGKNAPKQIHVAHRRSQSELTNLMIEQFTLQKQLEQ
VQAQQQQLLAQHQQLAQQTGQYLSGNSGPGNHFAPQPPHPHYNSNGNSPNMSAGGNRSRA
HSRNNSGYYQNSYDNNNNNNNNNNNSGPNSHRKTSSQSSIYGHSRRHSLGLNEAKKAAAE
EQAKRISGGEAGVTVKIDPVQSDTGSNTTTEQSEFKFPPPPTSQQGHRRATSNLSPPSFK
FPPNSQGDNDDEFIATSSTHRRTKTRNNEYSPGINSNWRTQSQQSQQQLSPFRHRGSNSR
DYNSLNTLEPPAIFQQGHKHRASNSSVHSFSSQGNSNGGGRKSLFAPYLPQANIPELIQE
GRLVAGILRVNKKNRSDAWVSTDGALDADIYICGSKDRNRALEGDLVAVELLVVDDVWES
KKEKEEKKRRKDASMQHDIIPLNSSDDYHNDASATAATSNNFLSSSSSSDSPNKDDSSIR
RNTSSNINNDNDPLSSPTKTGVKRRSSLKQRPTQKKNDDVEVEGQSLLLVEEEEINDKYK
PLYAGHVVAVLDRIPGQLFSGTLGLLRPSQQANSDNNKPPQSPKIAWFKPTDKKVPLIAI
PTELAPKDFVENADKYSEKLFVASIKRWPITSLHPFGILVSELGDIHDPNTEIDSILRDN
NFLSNEYLDQKNPQKEKSSFQPLPLTAENLEKRRNFTDDNEYNILAISELGWISGFALHV
RNNDDGTVELGCHVVDVTSHIEEGSSVDRRARKRSSAVFMPQKLVNLLPQSFNDALSLAP
GKESPTISVVYTLDSSTLRVQSTWVGESVISPSNILSLEQLDEKLLSGNPGTYLSLVQEI
ARSFYAVRINDPEAKLLPTLSLLESLDDEKVKVDLNILDRTSGFIVINEIKRKVNSTVAE
KIYTKLGDLALLRRQMQPIATKMASFRKKIQNFGYDVDISSADELIKAVLKIEDDDVRVG
IEILLFKTMPRARYFIAGKVDPDQYGHYALNLPIYAHFTDPMRRYADHVVHRQLKSVIHD
VPYTEDIEALKITSEYCNFKKDCAYQAQEQAIHLLLCKTINDMGNTTGQLLTVATVLQVY
ESSFDVFIPEFGIEKRVHGDQLPLIKAEFDGTNRVLELHWQPGVDSATFIPADEKNPKSY
RNSIKNKFSSTAAEIANIELDKEAESEPLISDPLSKELSDLHLTVPSLRLPSADNNEQNA
LDKFIATTETRIENDNYIQEIHELQKIPILLRAEVGMALPCLTVRALNPFMRRE
NT seq 3765 nt   +upstreamnt  +downstreamnt
atgtctaaaaatagtaacatgaataacaatagatcgcaagatccaaacaacatgtttgta
caaaccacaggaggtgggaaaaatgctccgaagcaaatccatgttgcacatagacgttct
caaagtgaactgacgaatctaatgattgagcaattcactttgcaaaagcaactggaacaa
gtccaagcacaacagcaacaactgctggcccaacatcaacaattggcccaacagacagga
caatatctttcgggaaattcaggcccaggtaatcattttgctcctcaacctcctcaccca
cattacaactcaaatggtaattcacccaatatgagtgctggtggcaatagaagtagagcc
cattcgagaaacaattctggatattatcaaaactcctacgataacaataacaacaataac
aacaacaataataactctggtcctaattcgcacagaaagactagttcacaatctagcatt
tacggtcattcgagaaggcattctttaggtctgaatgaggctaagaaggccgctgctgaa
gaacaggccaaaagaatatctgggggtgaagcaggtgtaactgtgaagatagatcctgtt
caatcagatactggttcaaataccactacagaacagtccgaattcaagttcccgccacca
ccaacctcacaacagggccaccgccgtgcaacttcaaatctatcaccaccttctttcaag
tttccgccaaactcccaaggtgacaatgacgacgaattcatagccacttcttccacacat
cgtcgcacaaagacaagaaacaatgaatattcgccaggtatcaattctaactggaggact
caatcacagcaatcgcaacagcaactgtctccattccgtcacagaggttccaactccagg
gattataattcattaaacactctagagccccctgcgatctttcaacagggtcataagcac
cgtgcttctaattcatctgttcatagtttcagctctcaaggcaatagcaacggaggcggg
cgtaaatccctatttgcaccctatcttcctcaagcaaatattccggaactgatccaagaa
ggaagactagtagctggtattttaagagttaacaagaaaaacaggtcagatgcttgggtc
tctacagatggggctcttgatgccgacatttatatctgcggctccaaagatcgtaataga
gctctcgaaggtgatttggttgccgtagagttattagtcgtcgatgacgtttgggaatct
aaaaaggaaaaagaagaaaaaaagagaagaaaggatgcctctatgcaacacgatattatt
cctttgaacagtagtgacgattaccacaacgatgcatctgccactgcagcaacgagtaat
aattttctatcgtcatcttcgtcatccgactcgccaaacaaagatgactcgtccattaga
agaaatacgtcatcaaacatcaataacgacaacgatcctttatcgtctcccactaaaaca
ggtgtgaagagaagaagttcattaaagcaacgtccaacccaaaagaaaaatgatgatgtt
gaggttgaaggtcaatcgttattgttagttgaggaggaggaaataaatgacaaatacaaa
ccactgtatgcaggtcacgttgttgctgttttggatcgtatccctggtcaattattcagt
ggtacgttgggtctattgagaccatcccagcaagctaacagtgacaataataaaccacct
cagagcccaaaaatagcctggtttaaacctactgataagaaggttccgttaatcgcaatt
ccaacagagttggcaccaaaggactttgttgaaaatgcagataaatactccgagaagcta
tttgttgcctctatcaaacgttggccaatcacatctttgcatccgtttggtattttagtt
tctgaactcggagacattcacgatccaaacaccgaaattgattctattctaagggataac
aatttcctttcaaatgaatatctggatcagaaaaatccacaaaaggagaaatcgagcttt
caaccactgccattaacagcggagaacttggaaaagagaagaaattttacagacgataat
gaatacaacattctcgcaatttcagagcttggatggatctcgggatttgctttacatgtt
agaaacaacgatgatggcacggttgagctaggttgtcatgtcgttgacgtaacaagccat
attgaagagggttcttctgttgacagacgtgctagaaaaagatcatccgcagtatttatg
ccacagaagctcgttaatttactaccacagtccttcaacgacgcactctcactggcaccg
ggtaaagaatctcccaccatatcagttgtatatactctagattcttctactctaagagtt
caatctacttgggtaggagaatcggtcatctctccatcgaatattttatcattggaacaa
ttggatgaaaaattgttaagcggaaaccctgggacctacctctctctggtacaagaaatt
gcaagatcattctatgctgtaagaataaatgaccctgaagccaaattgcttcctacacta
tctttactggagagtttagatgacgaaaaagttaaagtcgacttaaacatcttggataga
acttcaggctttattgtaataaacgaaattaaaagaaaagttaattcgaccgtagcagag
aagatttataccaagcttggtgacttagctcttttgagaagacaaatgcaacctattgca
accaaaatggcgtcattcaggaagaaaatccaaaacttcggttacgatgttgacatcagt
tcggcagatgaactcattaaagcagtgttaaagattgaagatgacgacgtaagagtcgga
attgaaattttactgttcaagactatgccaagagccagatatttcattgccggcaaggtc
gatccagatcagtacggtcattatgctctgaacttacctatctatgctcatttcacagat
ccaatgagaagatatgctgatcatgtcgttcacagacaattaaaatctgttattcacgat
gttccatatactgaagatatagaagcactaaagattacttctgagtactgtaatttcaaa
aaagattgcgcctatcaggcccaagaacaagcaattcacttactcctatgtaaaacgatc
aatgatatgggtaatactactggccagttgttgactgtggccactgtgttgcaagtttac
gagtcttcgtttgacgtctttattccagaatttggtattgaaaaaagagttcacggtgat
caactgcctttgatcaaggccgaatttgacggcaccaatcgtgttttagaattacattgg
caacctggtgtagatagcgcaactttcatcccagcggacgaaaagaatccaaaatcctac
aggaactctatcaaaaacaaattcagttccacggccgcagaaatcgctaatattgaactc
gataaagaagctgagtcagaaccactgatcagtgacccattaagtaaagaacttagcgac
ttgcatttaacggtaccaagtctaaggttaccatccgcggacaacaacgaacaaaatgcc
ttggacaagttcattgctactactgaaactaggatcgaaaatgataactatattcaagaa
atacatgaattacaaaagattcctattttgttgagagctgaagtgggaatggctttgcca
tgcttaaccgttcgtgcattaaatccgtttatgagaagagaataa

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