Saccharomyces eubayanus: DI49_0489
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Entry
DI49_0489 CDS
T08138
Name
(RefSeq) TFB1-like protein
KO
K03141
transcription initiation factor TFIIH subunit 1
Organism
seub
Saccharomyces eubayanus
Pathway
seub03022
Basal transcription factors
seub03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
seub00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
DI49_0489
09124 Replication and repair
03420 Nucleotide excision repair
DI49_0489
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
seub03021
]
DI49_0489
03400 DNA repair and recombination proteins [BR:
seub03400
]
DI49_0489
Transcription machinery [BR:
seub03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIH
DI49_0489
DNA repair and recombination proteins [BR:
seub03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TFIIH complex
DI49_0489
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
BSD
PH_TFIIH
Motif
Other DBs
NCBI-GeneID:
28929627
NCBI-ProteinID:
XP_018223853
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All DBs
Position
II:857351..859282
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AA seq
643 aa
AA seq
DB search
MSHSGAAIFKKVSGIIAINEDVSPAELTWRSTDGDKIHTVPLSTIDKLQATPTSSEKMML
RLIGKVDESKKQKDNEGNEVLPKPQSHMFSFNNRTVMDNIKMTLQQIISRYKDTDIYEEK
RRREESAQNTETPMSPSPAETDTPTPHLDTPHLNNGAPLINTAKLDDSLSKDKLLINLKL
QQSLLKGNKLLMKVFQETVINAGLPPLEFWSTRIPLLRAFALSTSQKVGPYNVLSTIKPV
ASSENKVNVNLSREKILNIFENYPIVKKAYTDNVPKNFKEPEFWARFFSSKLFRKLRGEK
IMQNDRGDVIIDRYLTLDQEFDRKDDDMLLHPVKKIIDLDGNIQDDPVVRGNRPDFTMQP
GVDINGNSDGTVDILKGMNRLSEKMIMALKNEYSRTNLQSKSNNANDDEDEDRDERNELK
IDDLNESYKTNYAIIHLKRNAHEKTTDKDTDDVAPKKKADLNVSNQQMLQQLSLVMDNLI
NKLDLTQVVPNKEVSNGINKRVITAIKINAKQAKHNNVDSALGAFVGTTSQANESEVKSD
LPVDLLESCRMLHTTCCEFLKHFYIHFQSGEQKQAATVKKLYNHLKDCIEKLNELFQDVL
NGDGEPMSNTCTAYLKPILNSITLATDKYDECYDEYNSSNGAT
NT seq
1932 nt
NT seq
+upstream
nt +downstream
nt
atgtcacattccggtgctgccattttcaagaaggtttcagggataatcgctattaatgaa
gacgtgtctcctgcagaattgacgtggaggtctacagatggtgacaagatccatacagtt
ccattgtccaccatcgacaaactgcaagctactccaacttcaagtgaaaagatgatgttg
aggctgattggtaaagtggacgaatcaaaaaagcaaaaagataacgaagggaacgaagtc
ttgccgaaaccgcaatctcatatgttttcgttcaacaatagaacggtcatggataatatt
aagatgactttacagcagatcatttcccgttataaggatacagacatatatgaagagaag
agaagaagagaggaatctgcgcaaaacacagagacaccgatgagcccctctcccgcggag
acagacactccaacgccacatctggatacaccacatctgaataatggagctccgctaatc
aatacagccaaactggatgattcgttgtccaaggataaattactgattaatctaaaactc
cagcaatctttgttaaagggtaacaaactactgatgaaggttttccaagaaacggtcatc
aatgctggtttacccccactggagttttggtctactagaattccgctgttaagagccttt
gctctatccacttcgcaaaaagtagggccctataacgttttgtccactatcaaaccagtg
gcctcgtcggaaaataaagtcaatgttaacctgtcaagggaaaaaatcttgaacattttt
gaaaactatcccattgtaaagaaagcatacactgacaatgtcccgaaaaatttcaaagag
ccagaattttgggcaagatttttctcctcgaaattgtttagaaaattaagaggtgaaaag
attatgcaaaatgacagaggtgatgtgatcatcgataggtacttgacgttggatcaagaa
tttgacagaaaggatgacgatatgctattgcatccagtgaaaaaaattatagatttggac
ggaaatatacaagacgatccagtagtacgaggtaataggccggattttactatgcagcca
ggtgtagatatcaatggtaacagtgacgggacagtggacatcttaaagggtatgaatagg
ttaagcgaaaaaatgattatggctttgaaaaacgaatattccagaacgaatttacagagc
aaatcgaataatgcgaacgatgatgaagatgaagatagggacgaaagaaatgaactaaaa
attgatgacttgaacgagagttacaagaccaattatgccatcatacacctcaaaagaaat
gcacacgaaaaaacaacggacaaggatacagacgacgtggcaccaaagaaaaaggcggat
ttgaatgtttctaaccaacaaatgctgcaacaattatcgttggttatggacaatttgatc
aataagctagacttaacgcaagtggttcccaataaagaggtgagtaacggtatcaacaaa
agagtcataaccgcaatcaagatcaacgctaagcaggcaaaacacaataatgtcgactcg
gcactcggcgcttttgtaggcaccacctctcaggcaaacgaatcggaagtgaaaagtgac
ctcccagtagacttgttagagagttgcagaatgctacacaccacgtgctgtgaattcttg
aagcatttctatatccatttccaaagcggtgagcaaaagcaagccgccaccgtcaagaag
ctttataaccatttaaaggattgcattgaaaagctgaacgagctgtttcaagatgttctc
aatggtgacggcgagcctatgtcgaatacatgcacagcctatttgaagccaattctaaac
tctatcactcttgccacagacaaatatgacgagtgttacgacgagtataacagctcgaac
ggtgctacataa
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