Saccharomyces eubayanus: DI49_0542
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Entry
DI49_0542 CDS
T08138
Name
(RefSeq) CDC40-like protein
KO
K12816
pre-mRNA-processing factor 17
Organism
seub
Saccharomyces eubayanus
Pathway
seub03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
seub00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
DI49_0542
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
seub03041
]
DI49_0542
Spliceosome [BR:
seub03041
]
Complex C
Other components
Step II factors
DI49_0542
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40
WD40_Prp19
WD40_CDC20-Fz
WD40_WDHD1_1st
Beta-prop_EML_2
WDR55
EIF3I
Beta-prop_WDR90_POC16_2nd
Beta-prop_TEP1_C
Beta-prop_EML
WD40_MABP1-WDR62_2nd
Beta-prop_TEP1_2nd
Beta-prop_CAF1B_HIR1
Beta-prop_SPT8
Beta-prop_IFT122_1st
Beta-prop_WDR75_1st
Beta-prop_EIPR1
WD40_RFWD3
Beta-prop_SCAP
WDR90_beta-prop_4th
Beta-prop_NWD2_C
Beta-prop_WDR75_2nd
Motif
Other DBs
NCBI-GeneID:
28929680
NCBI-ProteinID:
XP_018223902
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Position
II:complement(969129..970490)
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AA seq
453 aa
AA seq
DB search
MGLVEGYGTSSDSDSDTVENQSTCIRGANLQGDLYERTKASIHKRKQHLTKSELKRRRKI
RKGSGPWGSWSSSDDEGLENNENLVGQQDTFIDVIDEDDQDSDAVQTEEISNFYGKLEKD
YQGRGYLHPPNDIDVDLHKERMSFRCYLPKNVIRKYAGHSSGTTALKFLPKTGHLFLSGG
NDHTIKLWDFYHERECLRDFQGHTKPIKALRFADDCLSFLSSSFDRNVKIWDTETGKVKT
RLHLKSTPADVESRPTNPHEFIVGLSNSKILHYDDRVFEKQGLVQTYDHHLSSILALKYF
PDGSKFISSSEDKTVRIWENQINVPIKQISDTAQHSMPFLNVHPSHNYFCAQSMDNRIYS
FSLKPKYKRHPKKIFKGHSSAGYGIGLSFSGDGRYISSGDSKSRLFTWDWNTSRMLNSLK
IPGNKPITQVDWHPQETSKVICSGAAGKIYVCD
NT seq
1362 nt
NT seq
+upstream
nt +downstream
nt
atgggtttagtagaaggctatggaaccagttctgattctgattctgacaccgtcgaaaat
caatccacatgtataagaggtgctaacttgcaaggtgatctgtatgaacgaactaaagcg
agcattcataaaagaaagcaacatttaacaaaatcagaactcaaaagaaggcggaagata
cgtaagggaagtgggccatggggtagctggtcaagtagcgacgacgaaggtttagaaaac
aatgaaaatctggtaggacaacaagataccttcattgacgtgatagatgaggacgatcaa
gattcagatgcagtacagaccgaagaaatttccaatttctatggcaaattggaaaaggac
tatcaaggtcgaggatatttacatccaccaaatgacattgacgttgatcttcataaggaa
agaatgtcctttcggtgttatttaccgaaaaacgttatacgtaaatatgcagggcattcc
agtggtaccactgccctgaaatttttaccaaaaacagggcacctgttcctttcaggtggt
aatgatcatactataaaactttgggatttttaccacgaacgtgaatgccttcgagacttt
caaggtcataccaaacccatcaaggcgttacgtttcgctgatgattgtttatctttcctc
agttcctcttttgatagaaacgtcaaaatttgggacactgaaactggtaaagtgaaaacc
aggttacatcttaaatcaaccccagcagatgtcgaatctcgacccacaaacccacatgag
ttcatcgtgggtttatcaaactccaagatattgcactatgatgaccgtgtttttgagaaa
cagggccttgttcagacatatgatcaccacttaagtagtattttggctcttaagtacttt
cctgatggttctaagtttatttcttcctctgaagacaagactgtaagaatttgggaaaat
caaattaatgtgcccataaagcaaataagtgatacagctcaacattccatgccattttta
aatgtgcacccgtctcacaactatttttgtgcacaaagcatggataatagaatatattca
ttcagtttgaaacccaaatataagagacaccccaaaaagatattcaaagggcactcttca
gcaggctacggtataggcttgtcattttctggcgacggtcgttacatatcttcgggcgat
tcaaaaagtagactcttcacatgggattggaacacatcacgtatgttgaatagcttaaaa
attccaggcaataagccgataactcaagttgactggcatcctcaagaaacaagtaaagtt
atatgcagtggagctgcaggaaaaatatatgtgtgcgactaa
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