KEGG   Saccharomyces eubayanus: DI49_0542
Entry
DI49_0542         CDS       T08138                                 
Name
(RefSeq) CDC40-like protein
  KO
K12816  pre-mRNA-processing factor 17
Organism
seub  Saccharomyces eubayanus
Pathway
seub03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:seub00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    DI49_0542
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:seub03041]
    DI49_0542
Spliceosome [BR:seub03041]
 Complex C
  Other components
   Step II factors
    DI49_0542
SSDB
Motif
Pfam: WD40 WD40_Prp19 WD40_CDC20-Fz WD40_WDHD1_1st Beta-prop_EML_2 WDR55 EIF3I Beta-prop_WDR90_POC16_2nd Beta-prop_TEP1_C Beta-prop_EML WD40_MABP1-WDR62_2nd Beta-prop_TEP1_2nd Beta-prop_CAF1B_HIR1 Beta-prop_SPT8 Beta-prop_IFT122_1st Beta-prop_WDR75_1st Beta-prop_EIPR1 WD40_RFWD3 Beta-prop_SCAP WDR90_beta-prop_4th Beta-prop_NWD2_C Beta-prop_WDR75_2nd
Other DBs
NCBI-GeneID: 28929680
NCBI-ProteinID: XP_018223902
LinkDB
Position
II:complement(969129..970490)
AA seq 453 aa
MGLVEGYGTSSDSDSDTVENQSTCIRGANLQGDLYERTKASIHKRKQHLTKSELKRRRKI
RKGSGPWGSWSSSDDEGLENNENLVGQQDTFIDVIDEDDQDSDAVQTEEISNFYGKLEKD
YQGRGYLHPPNDIDVDLHKERMSFRCYLPKNVIRKYAGHSSGTTALKFLPKTGHLFLSGG
NDHTIKLWDFYHERECLRDFQGHTKPIKALRFADDCLSFLSSSFDRNVKIWDTETGKVKT
RLHLKSTPADVESRPTNPHEFIVGLSNSKILHYDDRVFEKQGLVQTYDHHLSSILALKYF
PDGSKFISSSEDKTVRIWENQINVPIKQISDTAQHSMPFLNVHPSHNYFCAQSMDNRIYS
FSLKPKYKRHPKKIFKGHSSAGYGIGLSFSGDGRYISSGDSKSRLFTWDWNTSRMLNSLK
IPGNKPITQVDWHPQETSKVICSGAAGKIYVCD
NT seq 1362 nt   +upstreamnt  +downstreamnt
atgggtttagtagaaggctatggaaccagttctgattctgattctgacaccgtcgaaaat
caatccacatgtataagaggtgctaacttgcaaggtgatctgtatgaacgaactaaagcg
agcattcataaaagaaagcaacatttaacaaaatcagaactcaaaagaaggcggaagata
cgtaagggaagtgggccatggggtagctggtcaagtagcgacgacgaaggtttagaaaac
aatgaaaatctggtaggacaacaagataccttcattgacgtgatagatgaggacgatcaa
gattcagatgcagtacagaccgaagaaatttccaatttctatggcaaattggaaaaggac
tatcaaggtcgaggatatttacatccaccaaatgacattgacgttgatcttcataaggaa
agaatgtcctttcggtgttatttaccgaaaaacgttatacgtaaatatgcagggcattcc
agtggtaccactgccctgaaatttttaccaaaaacagggcacctgttcctttcaggtggt
aatgatcatactataaaactttgggatttttaccacgaacgtgaatgccttcgagacttt
caaggtcataccaaacccatcaaggcgttacgtttcgctgatgattgtttatctttcctc
agttcctcttttgatagaaacgtcaaaatttgggacactgaaactggtaaagtgaaaacc
aggttacatcttaaatcaaccccagcagatgtcgaatctcgacccacaaacccacatgag
ttcatcgtgggtttatcaaactccaagatattgcactatgatgaccgtgtttttgagaaa
cagggccttgttcagacatatgatcaccacttaagtagtattttggctcttaagtacttt
cctgatggttctaagtttatttcttcctctgaagacaagactgtaagaatttgggaaaat
caaattaatgtgcccataaagcaaataagtgatacagctcaacattccatgccattttta
aatgtgcacccgtctcacaactatttttgtgcacaaagcatggataatagaatatattca
ttcagtttgaaacccaaatataagagacaccccaaaaagatattcaaagggcactcttca
gcaggctacggtataggcttgtcattttctggcgacggtcgttacatatcttcgggcgat
tcaaaaagtagactcttcacatgggattggaacacatcacgtatgttgaatagcttaaaa
attccaggcaataagccgataactcaagttgactggcatcctcaagaaacaagtaaagtt
atatgcagtggagctgcaggaaaaatatatgtgtgcgactaa

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