KEGG   Saccharomyces eubayanus: DI49_0579
Entry
DI49_0579         CDS       T08138                                 
Name
(RefSeq) RPB7-like protein
  KO
K03015  DNA-directed RNA polymerase II subunit RPB7
Organism
seub  Saccharomyces eubayanus
Pathway
seub03020  RNA polymerase
seub03420  Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:seub00001]
 09120 Genetic Information Processing
  09121 Transcription
   03020 RNA polymerase
    DI49_0579
  09124 Replication and repair
   03420 Nucleotide excision repair
    DI49_0579
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:seub03021]
    DI49_0579
   03019 Messenger RNA biogenesis [BR:seub03019]
    DI49_0579
   03400 DNA repair and recombination proteins [BR:seub03400]
    DI49_0579
Transcription machinery [BR:seub03021]
 Eukaryotic type
  RNA polymerase II system
   RNA polymerase II
    Pol II specific subunits
     DI49_0579
Messenger RNA biogenesis [BR:seub03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   mRNA cycle factors
    P-body specific factors
     DI49_0579
DNA repair and recombination proteins [BR:seub03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    TCR (transcription coupled repair) factors
     DNA-directed RNA polymerase II complex
      DI49_0579
SSDB
Motif
Pfam: S1 SHS2_Rpb7-N RNA_pol_Rbc25 MSSS
Other DBs
NCBI-GeneID: 28929717
NCBI-ProteinID: XP_018223938
LinkDB
Position
II:complement(1037548..1038063)
AA seq 171 aa
MFFIKDLSLNITLHPSFFGPRMKQYLKTKLLEEVEGSCTGKFGYILCVLDYDNIDIQRGR
ILPTDGSAEFNVKYRAVVFKPFKGEVVDGTVVSCSQHGFEVQVGPMKVFVTKHLMPQDLT
FNAGSNPPSYQSSEDVITIKSRIRVKIEGCISQVSSIHAIGSIKEDYLGAI
NT seq 516 nt   +upstreamnt  +downstreamnt
atgtttttcattaaagacctttcgcttaatatcacgcttcatccgtccttttttggccct
cgaatgaagcagtatctaaagacaaaactactagaagaagttgaaggctcatgtacaggt
aaattcggttacatcctttgtgtactagactacgataacatagacatccaacgtgggaga
atattgcccaccgatgggtcagcagagttcaatgtgaaatatagagccgtcgttttcaaa
ccattcaaaggggaagtggtggacggcacagtagtatcatgttctcaacacgggttcgaa
gtacaagtaggtccgatgaaagtattcgtaaccaagcatttgatgcctcaagacttgaca
ttcaatgcaggctcaaatcctccgtcgtaccaaagttcggaagatgtcattacaataaaa
agtagaattagagtcaaaattgaaggttgtattagtcaagttagttccatccacgcaatc
ggtagtatcaaagaagattacttgggtgctatttaa

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