Saccharomyces eubayanus: DI49_0589
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Entry
DI49_0589 CDS
T08138
Name
(RefSeq) SYF1-like protein
KO
K12867
pre-mRNA-splicing factor SYF1
Organism
seub
Saccharomyces eubayanus
Pathway
seub03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
seub00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
DI49_0589
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
seub03019
]
DI49_0589
03041 Spliceosome [BR:
seub03041
]
DI49_0589
Messenger RNA biogenesis [BR:
seub03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Other transport factors
DI49_0589
Spliceosome [BR:
seub03041
]
Complex B
Other components
Prp19-related factors
DI49_0589
Complex C
DI49_0589
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HAT_Syf1_CNRKL1_C
HAT_Syf1_CNRKL1_N
HAT_Syf1_M
HAT_PRP39_N
HAT_PRP39_C
Suf
CetZ_C
DUF1688
Motif
Other DBs
NCBI-GeneID:
28929727
NCBI-ProteinID:
XP_018223948
LinkDB
All DBs
Position
II:1059294..1061879
Genome browser
AA seq
861 aa
AA seq
DB search
MPYAHPHAVKESMNGIDENIKNDEDVAFEYEIQKTPQSVLTWKRYLQYWENNGRTDDQIR
WLYERFCSQFSTDTSIWEEYIRWESTRKVIGASRILSLFQRCLKECVQDCDKICLSYLEL
AIEQCDLTTIRDAMNLSLIRVDTKMHSKVWEPVLRFITEKFLLLTQLDSTQEEDEENVDE
AELINILLTKGFTKIGFISEEIVESKSIGDVWSAQILERYLRVTPQQKQHEVLMTLAKTR
DNSTVNSVYKKYLIKDRDSGKYFPNPKLTFSLNFNYLVTLEKLGLDEQYEEFMNQMKVLY
AENWVFLTLSLARHYTSRGRLDQCEDLLQKSLQETMKYTDFDRVYSFYLLFEQQCSQIIL
EELKDNSPKSFNREEWVAKLQRHMATFESLVNSHDIYLNDLALRQDPHVVETWMKRVALQ
ETPAAKCNVYAEAVLKIDPLKVNTPGSFGKLWRLYGDLYWDKKATSTARELWAQALKVPF
PFVQDLEEIYLNWAEKELDNEGIERTICILEDALKIPKIPDILIEKFNSGRRRVPAQTVI
FNSLRIWSKYIDYLEAYCPKGATSSSKLFNKTKAAYNNVVDLRLITPAMVENFAMFLQSH
QEVVDSFQVYEKTIPLFPPEIQYYLWIEYLEVATSPQLSSLSPEHIRFLFEEALNSLCSH
GIDCKTIFIAYSTFEERQSGLVRKSIEVLHRGAVSDAVSMNTHLESRLQLWKMCISKAVS
TMGPSVARDLYQECIKVLPNSKAVEYVINFSDLEASLGEIVRAREILVYGAELLPPSRNT
ELWNRFEIFELKHGDKETYKDMLKLKKLLDSGMVIDSESVSQAKGNINFVAAATTHGPNS
RGTVEQGNSQPINPDEIELDI
NT seq
2586 nt
NT seq
+upstream
nt +downstream
nt
atgccatacgctcatccacatgcagtgaaagaatcaatgaacggaatcgatgagaacata
aagaatgacgaagatgtggctttcgagtacgaaattcaaaagacaccacagagcgtactt
acgtggaaacgatacctccagtattgggaaaataacgggagaacagatgatcagattagg
tggctatatgaaagattttgctcccaattttcaactgatacaagtatatgggaagaatat
atacgatgggaatcgactagaaaagtaatcggagcctcacgtattttatcgctattccaa
agatgtttaaaagagtgtgttcaagattgcgataagatatgtctgtcctatttggagtta
gcgatagaacaatgtgatttgacgacaataagggacgctatgaatttatctttaataaga
gtagataccaagatgcattcaaaagtttgggaacctgttttgcgattcatcacagaaaag
tttttacttttaacacagttagattcgacgcaagaggaagatgaagaaaatgttgatgaa
gctgaattaataaatatacttttgacaaaaggtttcacaaaaataggctttatcagtgaa
gaaatagtggaaagtaaaagtataggtgatgtttggtcggcccaaattttagaaagatat
ctaagagtgacgccccagcaaaaacaacatgaagtcctgatgactctcgcgaaaacaaga
gataattctaccgtcaattcagtgtacaaaaaatatttaataaaagatagagatagtggc
aagtattttcccaatccaaaattaacattttcgctaaatttcaactatttggtcaccctg
gaaaaactgggtttagatgagcaatacgaggaattcatgaatcagatgaaagttttatat
gctgaaaactgggtctttttgactttgtcccttgccagacattacacttctcgtggtagg
cttgaccaatgtgaagatttgctgcaaaaaagtttacaggaaacaatgaagtatactgac
tttgatcgtgtttacagtttctacctcctttttgagcaacaatgctctcaaattatttta
gaagagttaaaagacaatagccccaagtcctttaatcgagaagaatgggttgcaaaatta
caacgccacatggcgacatttgaatctttagtaaattcacatgatatatacttgaatgat
ctagcattaaggcaagaccctcatgtggttgagacgtggatgaaaagagtggctttacaa
gaaacacctgcggcgaaatgtaatgtatatgcagaggccgtattgaagattgatcctctc
aaagtaaacacgcccggttcttttggtaaactatggcgcctatatggagatctgtattgg
gataagaaggccactagtacagcaagggagttatgggcacaggctctgaaagtaccattt
cctttcgtacaagatctggaagaaatttatttaaactgggctgagaaagaattagacaac
gaaggaattgagagaacgatttgcatacttgaagatgcattaaaaataccgaaaattccc
gatatcttaattgaaaagtttaatagcggacgcaggagagtgcctgcccaaactgtaata
ttcaactcgctgcgcatctggtccaaatacattgattacctggaggcctattgtccaaaa
ggcgctacttcatccagcaaactgttcaataagacaaaagcagcatataacaatgttgtt
gatctgaggttgattactccagcaatggtggaaaattttgcaatgtttttacaaagtcat
caagaggtagtagatagctttcaggtatatgaaaaaacgatccccctgttcccacctgaa
atccagtactacttatggattgagtacttggaagtagcaacctcccctcaattatcatct
ttaagtcctgaacacatcagatttttgttcgaagaagcgctgaatagtttatgttcgcat
ggcatagactgtaagacgatttttattgcgtacagtacttttgaagaaaggcaaagcggc
ttggtcaggaagagtattgaagtgttgcatcgaggtgctgtctcggatgctgtcagtatg
aatacgcatcttgaaagtagactacaactgtggaaaatgtgtatctcgaaggccgtatct
actatgggtccatcagtagccagagacttgtatcaagagtgtataaaggtcttgccgaac
tctaaggcagttgagtacgtgataaacttttcagaccttgaggcctctttgggagaaatt
gtacgagctagagaaattctggtttatggtgcagagcttctacctccatccagaaataca
gaattatggaaccgctttgagattttcgagttgaaacacggcgacaaagaaacttacaaa
gatatgttaaagctgaaaaagctactggattctggcatggtaattgattcggaaagtgtt
agccaggcgaaaggtaacatcaacttcgtagcagctgcaaccacacatggaccaaattcg
cgcggtacagttgaacaaggtaattcacaaccgattaacccagacgaaatagaactagat
atatga
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