KEGG   Saccharomyces eubayanus: DI49_0589
Entry
DI49_0589         CDS       T08138                                 
Name
(RefSeq) SYF1-like protein
  KO
K12867  pre-mRNA-splicing factor SYF1
Organism
seub  Saccharomyces eubayanus
Pathway
seub03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:seub00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    DI49_0589
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:seub03019]
    DI49_0589
   03041 Spliceosome [BR:seub03041]
    DI49_0589
Messenger RNA biogenesis [BR:seub03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Transport factors
    Other transport factors
     DI49_0589
Spliceosome [BR:seub03041]
 Complex B
  Other components
   Prp19-related factors
    DI49_0589
 Complex C
    DI49_0589
SSDB
Motif
Pfam: HAT_Syf1_CNRKL1_C HAT_Syf1_CNRKL1_N HAT_Syf1_M HAT_PRP39_N HAT_PRP39_C Suf CetZ_C DUF1688
Other DBs
NCBI-GeneID: 28929727
NCBI-ProteinID: XP_018223948
LinkDB
Position
II:1059294..1061879
AA seq 861 aa
MPYAHPHAVKESMNGIDENIKNDEDVAFEYEIQKTPQSVLTWKRYLQYWENNGRTDDQIR
WLYERFCSQFSTDTSIWEEYIRWESTRKVIGASRILSLFQRCLKECVQDCDKICLSYLEL
AIEQCDLTTIRDAMNLSLIRVDTKMHSKVWEPVLRFITEKFLLLTQLDSTQEEDEENVDE
AELINILLTKGFTKIGFISEEIVESKSIGDVWSAQILERYLRVTPQQKQHEVLMTLAKTR
DNSTVNSVYKKYLIKDRDSGKYFPNPKLTFSLNFNYLVTLEKLGLDEQYEEFMNQMKVLY
AENWVFLTLSLARHYTSRGRLDQCEDLLQKSLQETMKYTDFDRVYSFYLLFEQQCSQIIL
EELKDNSPKSFNREEWVAKLQRHMATFESLVNSHDIYLNDLALRQDPHVVETWMKRVALQ
ETPAAKCNVYAEAVLKIDPLKVNTPGSFGKLWRLYGDLYWDKKATSTARELWAQALKVPF
PFVQDLEEIYLNWAEKELDNEGIERTICILEDALKIPKIPDILIEKFNSGRRRVPAQTVI
FNSLRIWSKYIDYLEAYCPKGATSSSKLFNKTKAAYNNVVDLRLITPAMVENFAMFLQSH
QEVVDSFQVYEKTIPLFPPEIQYYLWIEYLEVATSPQLSSLSPEHIRFLFEEALNSLCSH
GIDCKTIFIAYSTFEERQSGLVRKSIEVLHRGAVSDAVSMNTHLESRLQLWKMCISKAVS
TMGPSVARDLYQECIKVLPNSKAVEYVINFSDLEASLGEIVRAREILVYGAELLPPSRNT
ELWNRFEIFELKHGDKETYKDMLKLKKLLDSGMVIDSESVSQAKGNINFVAAATTHGPNS
RGTVEQGNSQPINPDEIELDI
NT seq 2586 nt   +upstreamnt  +downstreamnt
atgccatacgctcatccacatgcagtgaaagaatcaatgaacggaatcgatgagaacata
aagaatgacgaagatgtggctttcgagtacgaaattcaaaagacaccacagagcgtactt
acgtggaaacgatacctccagtattgggaaaataacgggagaacagatgatcagattagg
tggctatatgaaagattttgctcccaattttcaactgatacaagtatatgggaagaatat
atacgatgggaatcgactagaaaagtaatcggagcctcacgtattttatcgctattccaa
agatgtttaaaagagtgtgttcaagattgcgataagatatgtctgtcctatttggagtta
gcgatagaacaatgtgatttgacgacaataagggacgctatgaatttatctttaataaga
gtagataccaagatgcattcaaaagtttgggaacctgttttgcgattcatcacagaaaag
tttttacttttaacacagttagattcgacgcaagaggaagatgaagaaaatgttgatgaa
gctgaattaataaatatacttttgacaaaaggtttcacaaaaataggctttatcagtgaa
gaaatagtggaaagtaaaagtataggtgatgtttggtcggcccaaattttagaaagatat
ctaagagtgacgccccagcaaaaacaacatgaagtcctgatgactctcgcgaaaacaaga
gataattctaccgtcaattcagtgtacaaaaaatatttaataaaagatagagatagtggc
aagtattttcccaatccaaaattaacattttcgctaaatttcaactatttggtcaccctg
gaaaaactgggtttagatgagcaatacgaggaattcatgaatcagatgaaagttttatat
gctgaaaactgggtctttttgactttgtcccttgccagacattacacttctcgtggtagg
cttgaccaatgtgaagatttgctgcaaaaaagtttacaggaaacaatgaagtatactgac
tttgatcgtgtttacagtttctacctcctttttgagcaacaatgctctcaaattatttta
gaagagttaaaagacaatagccccaagtcctttaatcgagaagaatgggttgcaaaatta
caacgccacatggcgacatttgaatctttagtaaattcacatgatatatacttgaatgat
ctagcattaaggcaagaccctcatgtggttgagacgtggatgaaaagagtggctttacaa
gaaacacctgcggcgaaatgtaatgtatatgcagaggccgtattgaagattgatcctctc
aaagtaaacacgcccggttcttttggtaaactatggcgcctatatggagatctgtattgg
gataagaaggccactagtacagcaagggagttatgggcacaggctctgaaagtaccattt
cctttcgtacaagatctggaagaaatttatttaaactgggctgagaaagaattagacaac
gaaggaattgagagaacgatttgcatacttgaagatgcattaaaaataccgaaaattccc
gatatcttaattgaaaagtttaatagcggacgcaggagagtgcctgcccaaactgtaata
ttcaactcgctgcgcatctggtccaaatacattgattacctggaggcctattgtccaaaa
ggcgctacttcatccagcaaactgttcaataagacaaaagcagcatataacaatgttgtt
gatctgaggttgattactccagcaatggtggaaaattttgcaatgtttttacaaagtcat
caagaggtagtagatagctttcaggtatatgaaaaaacgatccccctgttcccacctgaa
atccagtactacttatggattgagtacttggaagtagcaacctcccctcaattatcatct
ttaagtcctgaacacatcagatttttgttcgaagaagcgctgaatagtttatgttcgcat
ggcatagactgtaagacgatttttattgcgtacagtacttttgaagaaaggcaaagcggc
ttggtcaggaagagtattgaagtgttgcatcgaggtgctgtctcggatgctgtcagtatg
aatacgcatcttgaaagtagactacaactgtggaaaatgtgtatctcgaaggccgtatct
actatgggtccatcagtagccagagacttgtatcaagagtgtataaaggtcttgccgaac
tctaaggcagttgagtacgtgataaacttttcagaccttgaggcctctttgggagaaatt
gtacgagctagagaaattctggtttatggtgcagagcttctacctccatccagaaataca
gaattatggaaccgctttgagattttcgagttgaaacacggcgacaaagaaacttacaaa
gatatgttaaagctgaaaaagctactggattctggcatggtaattgattcggaaagtgtt
agccaggcgaaaggtaacatcaacttcgtagcagctgcaaccacacatggaccaaattcg
cgcggtacagttgaacaaggtaattcacaaccgattaacccagacgaaatagaactagat
atatga

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