Saccharomyces eubayanus: DI49_0929
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Entry
DI49_0929 CDS
T08138
Name
(RefSeq) COP1-like protein
KO
K05236
coatomer subunit alpha
Organism
seub
Saccharomyces eubayanus
Brite
KEGG Orthology (KO) [BR:
seub00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
seub04131
]
DI49_0929
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
seub04147
]
DI49_0929
Membrane trafficking [BR:
seub04131
]
Endoplasmic reticulum (ER) - Golgi transport
Retrieval pathways
Coat protein complex I (COP-I)
DI49_0929
Exosome [BR:
seub04147
]
Exosomal proteins
Exosomal proteins of other body fluids (saliva and urine)
DI49_0929
Exosomal proteins of bladder cancer cells
DI49_0929
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
COPI_C
B-prop_COPA_B_2nd
WD40
WD40_Prp19
WD40_WDHD1_1st
Beta-prop_EML_2
WD40_CDC20-Fz
WDR55
Beta-prop_WDR90_POC16_2nd
EIF3I
Beta-prop_CAF1B_HIR1
TPR_COPA_B
Beta-prop_TEP1_C
Beta-prop_EIPR1
Beta-prop_TEP1_2nd
Beta-prop_EML
ANAPC4_WD40
Beta-prop_WDR75_1st
Beta-prop_SCAP
WD40_MABP1-WDR62_2nd
WD40_RFWD3
Beta-prop_DCAF4
Beta-prop_Nup120_160
Beta-prop_WDR19_1st
WD40_MABP1-WDR62_1st
Beta-prop_RIG_2nd
eIF2A
Beta-prop_SPT8
Beta-prop_IFT140_1st
WDR90_beta-prop_4th
Beta-prop_IFT122_1st
Beta-prop_IFT122_2nd
DUF4309
Motif
Other DBs
NCBI-GeneID:
28930067
NCBI-ProteinID:
XP_018222945
LinkDB
All DBs
Position
IV:complement(184988..188593)
Genome browser
AA seq
1201 aa
AA seq
DB search
MKMLTKFESKSTRAKGIAFHPSRPWVLVALFSSTIQLWDYRMGTLLHRFEDHEGPVRGLD
FHPTQPIFVSAGDDYTIKVWSLDTNKCLYTLSGHLDYVRTVFFHRELPWIISASDDQTIR
IWNWQNRKEIACLTGHNHFVMCAQFHPTDDLIVSASLDETIRIWDISGLRKRHSAPSNNS
FEEQLNAQQNLLDGSLGDCVVKFILEGHTRGVNWASFHPTLPLIVSASDDRQVKLWRMSA
TKAWEVDTCRGHTNNVDSVIFHPHQNLIISVGEDKTLRVWDLDKRTPVKQFKRENDRFWL
IAAHPHINLFGAAHDSGIMVFKLDRERPCSVIHQNQLFFVNAEKQIQSFNFQKRVASLPY
ASLKGIGQPWDAFRSISYNPSQHSILINEANGKFALVILSKQPVGAVEPTSVTQDSGNFA
TFVGRNRFVVYNKNSESVEVRSLENKVTRNIKMEESVRTIVAAGPGSVLVIHPREAVLYD
VQQGKKVAQLAVKNVKYVSWSLDGQYVALMSKHTITLATKKLELINSMHETIRIKSAAWD
ESGVLIYSTLNHIRYSLLNGDRGIIKTLEKTLYITKVQGKLVYCLNRDGEIEILTIDPTE
YRFKKALVNKNFPEVLRLIKNSNLVGQNIISYLQKSGFPEIALQFVQDPHIRFDLALEYG
NLDVALDEAKKLNDDGVWERLNQEALAQGNTTLAEMIYQTQHSFDKLSFLYLVTGDVNKL
SKMQNIAQNREDFGSMLLNTIYNNSTKERSNIFADAGSLPLAYAVAKANGDDAAASAYLE
QAEIDAQDVTLPDQVNPSNFVQSPAISEPLAKWPLKEAELSYFEKAVLGQIDDLNIDDDV
PAENIAEEEEEPLAEESFNDMDIGEDEGAWDLGDEDLDVGEDLTEKVEEGEIASPAKEAE
TAVWIKNSKLPSVLVAAGAFDAAAQALNKQVGVVKLEPLKKYFTNIYEGCRTYMPSTPYE
LPAQLGYIRAYDDTVSEDQILPYVPGLDIVNEKMNEGYKNFKLNKLEVAIECFREAIYRI
TLLMVDDSEDEKLARKVLETAREYILGLSIELERRSLKEESTVRMLELAAYFTKAKLSPI
HRTNALQVAMSQHFKHKNFLQASYFAGEFLKIISSGPRAEQARKIKTKADSMASDAIPID
FDPYAKFDICAATYKPIYEDTPSVSDPLTGSKYIVTEKDKIDRIAMISKIGAPASGLRIR
V
NT seq
3606 nt
NT seq
+upstream
nt +downstream
nt
atgaagatgctaactaaattcgaatcaaagtccaccagggccaagggtattgccttccac
ccttccagaccttgggtattggtggctttgttctcctccaccatccagttatgggattac
agaatgggcacgctgcttcataggttcgaggatcacgaaggtcccgttcgtgggctagat
ttccacccaacccaaccaattttcgtttctgcaggtgacgactataccattaaagtctgg
tctttggacacaaacaagtgcctttacactttgtcgggtcatttggactatgttcgtacc
gtgtttttccaccgtgaattgccttggatcatatctgcctctgatgaccagaccataagg
atctggaactggcaaaaccgtaaggaaatcgcttgtttgactggtcacaatcattttgtc
atgtgtgctcaatttcatcccactgatgatctgatcgtttccgcttctttggatgaaacc
atcagaatttgggatatctcaggcttaagaaagagacattctgctcctagcaacaattct
ttcgaagaacaactgaatgcccaacaaaaccttttggacggttctcttggcgactgtgtg
gtgaaattcatcttggaaggtcacacaagaggtgttaactgggcctctttccatccaact
ttaccattgattgtctccgccagtgacgatcgtcaagtaaaattatggagaatgagtgct
acaaaggcttgggaagtcgacacttgcagaggtcacactaacaatgtcgacagtgtcatt
tttcacccacaccaaaatctgatcatttcagtcggtgaagacaaaactttaagagtctgg
gatcttgataagagaactccagtaaagcaatttaagagagaaaacgataggttttggtta
atcgcagcccaccctcatatcaacctatttggtgcagcccacgattctggtattatggtt
ttcaaactagatcgtgaaaggccatgtagcgttatccatcaaaatcaattgttttttgtc
aatgcggaaaagcaaattcaaagtttcaatttccaaaaaagagtcgcttcattaccttat
gcctcgttaaaaggcattggtcaaccttgggatgcatttagaagtatatcatacaaccca
tcccaacactccattctgattaatgaagctaacggcaagttcgctctcgtaatcctgtct
aaacaacccgtaggtgccgtggaaccaacaagcgttacccaagattcaggtaattttgcc
acttttgttggtcgtaatagatttgttgtttacaacaaaaactctgaatctgttgaagtt
cgttctttagaaaacaaagtgaccagaaacattaaaatggaggaatcggtaagaactatt
gtagctgctggtcctggatctgttttggtcatacatccaagagaagccgtcctctatgat
gtccaacagggcaaaaaggtagcccaattagctgttaaaaatgtcaagtacgtatcatgg
tccttagatggccaatatgttgcattgatgagcaaacataccataactttggctaccaag
aaattagaattgattaactctatgcatgaaaccatcagaatcaaaagtgctgcttgggat
gaaagcggtgtcttgatttactcaactttgaatcacattagatactcgctactgaacggc
gatagaggtattattaagactttggaaaagactttgtatatcacaaaagtccaagggaaa
ttagtttattgtttaaaccgtgatggtgaaattgaaatcctaaccattgaccccacagaa
taccgttttaagaaggcgttggtcaacaagaacttcccagaagtcttacgtctcataaag
aactctaatctagtcggtcaaaacattatctcctatttacagaagtcaggtttcccagag
attgctttgcagtttgtccaagatccacatattcgttttgatttggctctggaatatggt
aatctagatgttgccctagatgaagccaaaaaactaaatgacgatggtgtttgggaaaga
ttgaaccaagaggctttggcacaaggtaacactaccttagctgaaatgatttaccaaact
caacattctttcgataaattatcttttctatatcttgtcactggtgatgtcaacaaactg
tcaaaaatgcaaaatattgctcaaaaccgtgaagattttggaagtatgctattaaacact
atctacaataactccaccaaagaaagatctaatatttttgctgatgctgggtctttgcca
ttagcttatgccgtagcaaaggctaatggagatgacgcagcagcttcggcatatttggaa
caagccgaaatcgacgcacaagatgttactttaccagaccaagttaatccctccaatttc
gttcaaagcccggcaatctccgagccacttgcaaaatggccattaaaggaagctgaacta
tcttacttcgaaaaagctgtcttaggtcaaatcgatgatttgaacatagatgatgacgtt
ccggcagaaaatatcgccgaagaagaagaagaaccacttgctgaagaaagtttcaatgac
atggatatcggcgaggacgagggagcctgggacctaggtgacgaagatttggacgtagga
gaagatctaactgaaaaagtagaagaaggtgaaatcgcctctccagcaaaagaggctgaa
acggccgtttggattaagaactccaagttaccttccgtcctagttgctgctggtgctttt
gatgcagctgctcaagctttaaacaagcaagtaggtgttgtgaaactcgaaccgttaaaa
aaatacttcaccaacatatatgaaggttgtagaacatacatgcccagcacaccatacgaa
ctacctgctcaattaggttatatcagagcatacgatgatacagtgtctgaagaccaaatt
cttccatatgttccaggtcttgatattgttaacgagaaaatgaatgaaggctataagaac
ttcaaactgaataaattggaagttgcgattgaatgttttagagaagcaatttaccgtatc
acgctattaatggtcgatgactcagaagatgaaaaactggctcgcaaggtgctagaaact
gccagggaatatatattaggtttatccatcgagttggagcgtcgttcattaaaagaagaa
agtactgtgcgcatgcttgaactggctgcatatttcacaaaggctaagttgtccccaatc
catcgtaccaacgcactgcaagtggcgatgtcacaacatttcaagcacaaaaatttctta
caagcctcgtattttgcgggtgaatttctaaagattatttcatctggtcctcgtgctgaa
caagcacgtaaaatcaaaaccaaagccgactctatggctagtgatgccattccaattgac
tttgatccttacgccaaattcgatatctgtgcagctacttacaaaccaatttatgaagac
acaccttccgtttcagatccgttaactggtagtaaatatattgtcactgagaaagataaa
atagatagaattgctatgatttctaagatcggtgcaccagcatcgggactaagaatacgt
gtataa
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integrated database retrieval system
