Saccharomyces eubayanus: DI49_0946
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Entry
DI49_0946 CDS
T08138
Name
(RefSeq) CDC48-like protein
KO
K13525
transitional endoplasmic reticulum ATPase
Organism
seub
Saccharomyces eubayanus
Pathway
seub04141
Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:
seub00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
DI49_0946
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
seub03019
]
DI49_0946
03009 Ribosome biogenesis [BR:
seub03009
]
DI49_0946
04131 Membrane trafficking [BR:
seub04131
]
DI49_0946
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
seub04147
]
DI49_0946
Messenger RNA biogenesis [BR:
seub03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Ran-mediated transport factors
DI49_0946
Ribosome biogenesis [BR:
seub03009
]
Eukaryotic type
Pre-60S particles
Ribosome quality control proteins
DI49_0946
Membrane trafficking [BR:
seub04131
]
SNARE
SNARE associated proteins
Others
DI49_0946
Autophagy
Aggrephagy
Other aggrephagy associated proteins
DI49_0946
Exosome [BR:
seub04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
DI49_0946
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA
AAA_lid_3
CDC48_N
RuvB_N
AAA_16
AAA_5
AAA_2
AAA_33
TIP49
CDC48_2
AAA_22
AAA_14
RNA_helicase
nSTAND3
Mg_chelatase
AAA_28
AAA_17
ATPase
Parvo_NS1
AAA_7
AAA_24
IstB_IS21
NPHP3_N
Vps4_C
AAA_25
ABC_tran
AAA_18
Sigma54_activat
DUF815
ResIII
PhoH
SLFN-g3_helicase
KAP_NTPase
Motif
Other DBs
NCBI-GeneID:
28930084
NCBI-ProteinID:
XP_018222962
UniProt:
A0ABN8VNX2
LinkDB
All DBs
Position
IV:complement(226809..229319)
Genome browser
AA seq
836 aa
AA seq
DB search
MGEEHKPLLDASGTDPHEEDKTATAILRRKKKDNMLLVDDAINDDNSVIAINSNTMDKLE
LFRGDTVLVKGKKRKDTVLIVLIDDELEDGACRINRVVRNNLRIRLGDLVTIHPCPDIKY
ATRISVLPIADTIEGITGNLFDVFLKPYFVEAYRPVRKGDHFVVRGGMRQVEFKVVDVEP
EEYAVVAQDTIIHWEGEPINREDEENNMNEVGYDDIGGCRKQMAQIREMVELPLRHPQLF
KAIGIKPPRGVLMYGPPGTGKTLMARAVANETGAFFFLINGPEVMSKMAGESESNLRKAF
EEAEKNAPAIIFIDEIDSIAPKRDKTNGEVERRVVSQLLTLMDGMKARSNVVVIAATNRP
NSIDPALRRFGRFDREVDIGIPDATGRLEVLRIHTKNMKLADDVDLEALAAETHGYVGAD
IASLCSEAAMQQIREKMDLIDLDEDEIDAEVLDSLGVTMDNFRFALGNSNPSALRETVVE
SVNVTWDDVGGLDEIKEELKETVEYPVLHPDQYTKFGLSPSKGVLFYGPPGTGKTLLAKA
VATEVSANFISVKGPELLSMWYGESESNIRDIFDKARAAAPTVVFLDELDSIAKARGGSV
GDAGGASDRVVNQLLTEMDGMNAKKNVFVIGATNRPDQIDPAILRPGRLDQLIYVPLPDE
NARLSILNAQLRKTPLEPGMELTAIAKATQGFSGADLLYIVQRAAKYAIKDSIEAHRQRE
AEKEVKAEGEDVEMTDEGAKAEQEDQEPDPVPYITKEHFSEAMKTAKRSVSDAELRRYEA
YSQQMKASRGQFSNFNFNDAPLGTTGTDNANANNGAPSGSGAAFGSNAEEDDDLYS
NT seq
2511 nt
NT seq
+upstream
nt +downstream
nt
atgggtgaagaacataaaccgcttttggacgcctccggtactgatcctcatgaagaggat
aaaaccgccaccgccattctaagaagaaagaagaaggataacatgcttttggtcgacgat
gctatcaatgacgacaattctgtcattgccatcaactccaacactatggacaaactggaa
ttgttccgtggtgacaccgttcttgttaaggggaagaagagaaaggacacggtgttaatc
gtcttgatcgatgacgaattggaagacggtgcatgtagaatcaaccgtgtggttcgtaac
aacttacgcatcagactgggtgatctagtcacaatccatccttgcccagacatcaagtac
gccaccagaatttccgtactaccaattgctgataccattgaaggtattactggtaatctt
ttcgatgttttcttgaagccttacttcgtggaagcttacagaccagtgagaaaaggcgac
catttcgttgtgagaggtggtatgagacaagtcgaattcaaagtcgtggatgtcgaacct
gaagaatatgccgttgttgctcaagataccattatccactgggaaggtgagccaatcaac
agagaagacgaggaaaacaacatgaacgaagttggttacgatgacatcggtggttgccgt
aaacaaatggctcaaatcagagaaatggttgaattgccattgagacatcctcaattgttc
aaagccattggtatcaagccaccaagaggtgtcttgatgtacggtccaccgggtacaggt
aagactttaatggcaagagccgtagctaatgaaactggtgcctttttcttcttgattaat
ggtccagaagtcatgtcgaagatggctggtgagtctgaatcgaatttaagaaaggccttt
gaagaagctgagaagaatgcaccagctattattttcatcgatgaaatcgattctattgct
cctaagagagacaagaccaatggtgaagtcgaaagaagagttgtttctcaattgttgact
ttaatggacggtatgaaggcaagatctaatgtcgttgttattgctgcgactaacagacca
aactccattgatcctgccttgagaagattcggtagattcgatcgtgaagtggacattggt
atccccgacgctacaggtagattggaggtcctgcgtatccacaccaagaacatgaaattg
gccgatgacgttgacttggaagcgctggcagcagaaacacatggttatgttggtgctgat
atcgcctccttgtgttctgaagctgctatgcaacaaattcgtgaaaaaatggacttgata
gatttagatgaagatgaaattgatgcagaagtacttgattctttaggagtcaccatggac
aatttcagattcgctctaggtaactctaacccatccgcattgcgtgaaaccgttgtagaa
agcgtcaacgtcacttgggatgatgttggtggtttggacgaaatcaaggaggaattgaag
gaaactgtcgaatatccagtcttacatccagaccaatacaccaaattcggtttatctcca
tcaaagggtgtgttgttttacggaccaccaggtacaggtaaaactttgttggctaaagca
gtagccaccgaagtctctgccaacttcatttcagttaaaggtccagaattactaagtatg
tggtacggtgaatcagaatctaatattcgtgatattttcgataaggcaagagccgctgcg
ccaactgtcgttttcttggatgaattagattccattgctaaggcaagaggtggttctgta
ggtgatgctggcggtgcttctgatagagttgttaatcaattattgacagaaatggatggt
atgaacgctaagaagaatgttttcgttattggtgccaccaacaggccagaccaaatcgat
cctgctatcttgagacctggaagattagatcaattgatttatgttccattaccagatgaa
aatgctagattgtctatcctaaacgcacaattaagaaaaactccattagaaccaggtatg
gaattaactgcgattgccaaggctacccaaggtttctctggtgcagatttattatatatt
gtacagagggctgctaaatatgccatcaaggattctatcgaagctcacagacaacgtgaa
gctgaaaaggaagtaaaggcagaaggtgaagatgtggaaatgacagatgagggggcaaag
gctgaacaagaagatcaagaaccagatccagttccatatatcactaaggaacatttttca
gaagctatgaagaccgccaagcgttctgtctcagatgccgaactacgtcgttatgaagca
tactctcaacaaatgaaagcatctagaggtcaattcagtaatttcaacttcaacgatgct
ccattaggtactactggcacagacaatgctaatgctaataacggtgctccaagcgggtca
ggtgcagcatttggctctaacgcggaagaagatgatgatttgtatagttaa
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