Saccharomyces eubayanus: DI49_0959
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Entry
DI49_0959 CDS
T08138
Name
(RefSeq) RRP42-like protein
KO
K12589
exosome complex component RRP42
Organism
seub
Saccharomyces eubayanus
Pathway
seub03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
seub00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
DI49_0959
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
seub03019
]
DI49_0959
Messenger RNA biogenesis [BR:
seub03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Core exosome factors
DI49_0959
Prokaryotic type
Archeal mRNA degradation factors
Exosome components
Cofactors
DI49_0959
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_PH
Motif
Other DBs
NCBI-GeneID:
28930097
NCBI-ProteinID:
XP_018222975
LinkDB
All DBs
Position
IV:complement(253577..254374)
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AA seq
265 aa
AA seq
DB search
MSLSVAEKSYLYDSLASTPSIRPDGRLPHQFRPIEIFTDFLPSSNGSSRIIASDGSECIV
SIKSKVVDHSVENELLQVDVDIAGQRDDALIVETITSLLNKVLKSGNGIDSSKLQLTKKY
SFKIFVDVLVISSFSYPVSLISFAIYSALNSTYLPKLISAFDDLEVEELPTFHDYDMVKL
EISPPLVFILAIVGNNILVDPAANESEVANNGLIVTWSNGKITSPIRSVALNDSNVKGFK
PHLLKQGLAMVEKYASDIVRSLENL
NT seq
798 nt
NT seq
+upstream
nt +downstream
nt
atgtccctttcagtcgctgaaaagtcgtatctatacgactcgctagccagtacgccttca
attagacccgatgggaggctgcctcatcagttcagacccatagagatctttaccgatttt
ctaccaagttctaatgggtcgtccaggatcatagccagtgacggtagcgaatgcattgtg
agcatcaagtccaaagtcgttgatcattccgtggagaacgaactgctccaggtcgacgtg
gatattgcaggccaaagagacgatgccctgatagtggagacgatcacttccttgttgaat
aaggttctgaagtccgggaatgggatagactcgtcgaaactgcaattgacaaagaaatac
agttttaaaatatttgttgatgtcttggtcatttcttcattctcatacccagtttcttta
atatcgtttgccatttattccgcattgaactccacatatctaccgaagcttatttccgcg
tttgacgatttggaagtagaggagctgcccaccttccatgactatgacatggtcaagctc
gaaatcagcccacctctggtgtttatactggccatcgtgggcaacaacatactcgtggac
cctgctgccaacgaaagcgaagtggccaataatggtctaattgtcacgtggtcgaatggc
aagattacgtctcccatcagatcggtagcattaaacgactccaacgtcaaagggttcaaa
cctcatttgctgaaacaaggtcttgcaatggtagagaagtacgcctctgatatagtacga
tcattggagaatttataa
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