KEGG   Saccharomyces eubayanus: DI49_1122
Entry
DI49_1122         CDS       T08138                                 
Name
(RefSeq) RFC5-like protein
  KO
K10756  replication factor C subunit 3/5
Organism
seub  Saccharomyces eubayanus
Pathway
seub03030  DNA replication
seub03410  Base excision repair
seub03420  Nucleotide excision repair
seub03430  Mismatch repair
Brite
KEGG Orthology (KO) [BR:seub00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    DI49_1122
   03410 Base excision repair
    DI49_1122
   03420 Nucleotide excision repair
    DI49_1122
   03430 Mismatch repair
    DI49_1122
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:seub03032]
    DI49_1122
   03036 Chromosome and associated proteins [BR:seub03036]
    DI49_1122
   03400 DNA repair and recombination proteins [BR:seub03400]
    DI49_1122
DNA replication proteins [BR:seub03032]
 Eukaryotic type
  DNA Replication Elongation Factors
   RFC (replication factor C)
    DI49_1122
  DNA Replication Termination Factors
   ELG1-RFC complex
    DI49_1122
Chromosome and associated proteins [BR:seub03036]
 Eukaryotic type
  Sister chromatid cohesion proteins
   CTF18-RFC complex
    DI49_1122
DNA repair and recombination proteins [BR:seub03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   MMR (mismatch excision repair)
    RFC (replication factor C)
     DI49_1122
  Check point factors
   HRAD17(Rad24)-RFC complex
    DI49_1122
SSDB
Motif
Pfam: RFC_C RCF1-5-like_lid DNA_pol3_delta2 AAA Rad17 AAA_22 NYD-SP12_N AAA_16 RuvB_N AAA_27 Rep_fac_C
Other DBs
NCBI-GeneID: 28930259
NCBI-ProteinID: XP_018223128
LinkDB
Position
IV:593854..594918
AA seq 354 aa
MSLWVDKYRPKSLNALSHNEELTHFLKSLSDQPRDLPHLLLYGPNGAGKKTRCMALLESI
FGSGVYRLKIDVRQFVTASNKKLELNVVSSPYHLEITPSDMGNNDRIVIQELLKEVAQME
QVDFHDSKDGLAHRYKCVIINEANSLTKDAQAALRRTMEKYSKNIRLIMICDSMSPIIAP
IKSRCLLVRCPAPSDNEISNILSDVATNERIHLETKEILLKIASESNGNLRVSLLMLESM
ALNNELTLKVSSPIIKPDWIIVIQKLARKVVKERSVNSLIECRAVLYDLLAHCIPANVIL
KELTFALLSVETLNTVQKASVIENSSVFDERLSLGNKAIFHLEGFIAKVMCTLD
NT seq 1065 nt   +upstreamnt  +downstreamnt
atgtccttgtgggttgacaagtatagacctaagtcattaaatgcactttcacataatgaa
gaattgacgcattttttaaagtcactgtctgatcaacctcgcgatttacctcatctttta
ctatatggaccaaatggtgcaggtaagaagacgcgttgcatggcattactagagtctata
tttggttcaggagtttatagattaaagattgatgttagacagtttgttaccgcctcgaac
aagaaactagagttaaatgtggttagttcgccatatcatttggagatcacacccagtgat
atgggcaacaatgatagaattgtcattcaagagctgttgaaagaagtggcacaaatggaa
caagttgacttccacgattctaaagatgggttggctcatagatacaaatgtgttattatc
aacgaggcaaattctttaacaaaggatgcccaggctgccttgaggcgcaccatggaaaaa
tactctaagaacattaggctgatcatgatttgcgattctatgtcgcctataattgctccc
atcaaatcacgttgtcttttggttcgttgtcccgcaccaagtgataatgaaatctcaaat
attttatctgatgtagcgacgaatgaaagaatacatttagaaacaaaggaaattttgctg
aaaattgccagcgaatcgaatgggaatttacgagtctctctattgatgctcgaatctatg
gcattaaacaacgaactaacattgaaagtcagtagccctataataaagccggactggatt
atcgtaattcaaaagctagcgagaaaggtcgtcaaagaaagatctgttaactcattgatc
gaatgtagagccgttctatacgacttgctggctcactgtatacctgcgaatgtaattttg
aaggaactaacgtttgcgctgttaagcgtggaaaccttaaacactgtgcaaaaggcatcc
gttattgaaaattcaagtgttttcgatgaaaggctatcactggggaataaggcgatcttc
catttggaagggtttatagcaaaggtcatgtgcactttagattaa

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